KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:47:12 2014 Check: 00 ..
Name: ENSP00000379680/1-411 Len: 461 Check: 1823 Weight: 1.00
Name: ENSBTAP00000012508/1-411 Len: 461 Check: 7981 Weight: 1.00
Name: ENSTTRP00000016455/1-448 Len: 461 Check: 8853 Weight: 1.00
Name: bmy_01024T0/1-395 Len: 461 Check: 1166 Weight: 1.00
Name: BACU013426/1-384 Len: 461 Check: 454 Weight: 1.00
//
1 50
ENSP00000379680/1-411 ---------- ---------- ---------- ---------M LLKTVLLLGH
ENSBTAP00000012508/1-411 ---------- ---------- ---------- ---------M LLKTVLLLAL
ENSTTRP00000016455/1-448 PGSSDASAFL TFLSFQSPTY RAGKSRADLV RSRDAESRAM LLKTVLLLAL
bmy_01024T0/1-395 ---------- ---------- ---------- ---------- ----------
BACU013426/1-384 ---------- ---------- ---------- ---------- ----------
51 100
ENSP00000379680/1-411 VAQVLMLDNG LLQTPPMGWL AWERFRCNIN CDEDPKNCIS EQLFMEMADR
ENSBTAP00000012508/1-411 ASQVLVLENG LLRKPPMGWL AWERFRCNID CSEDPKNCIS EQLFMEMADR
ENSTTRP00000016455/1-448 VAQVLVLENG LLRKPPMGWL AWERFRCNTD CNEDPKNCIS ERLFMEMADR
bmy_01024T0/1-395 ---------- ------MGWL AWERFRCNTD CNEDPKNCIS ERLFMEMADR
BACU013426/1-384 ---------- ------MGWL AWERFRCNTD CNEDPKNCIS ERLFMEMADR
101 150
ENSP00000379680/1-411 MAQDGWRDMG YTYLNIDDCW IGGRDASGRL MPDPKRFPHG IPFLADYVHS
ENSBTAP00000012508/1-411 LAQDGWRDLG YVYLNIDDCW IGGRDAKGNL VPDRKRFPHG IAFLADYAHS
ENSTTRP00000016455/1-448 LAQDGWRELG YEYLNIDDCW IGGRDAKGNL VPDPKRFPNG MAFLADYAHS
bmy_01024T0/1-395 LAQDGWRDLG YVYLNIDDCW IGGRDAKGNL VPDPKRFPNG MAFLADYAHS
BACU013426/1-384 LAQDGWRDLG YVYLNIDDCW IGGRDAKGNL VPDPKRFPNG MAFLADYAHS
151 200
ENSP00000379680/1-411 LGLKLGIYAD MGNFTCMGYP GTTLDKVVQD AQTFAEWKVD MLKLDGCFST
ENSBTAP00000012508/1-411 LGLKLGIYED LGNFTCMGYP GTTLDKVVQD AQTFAEWKVD MLKLDGCYST
ENSTTRP00000016455/1-448 LGLKLGIYAD MGNFTCMGYP GTTLDKVVQD AQTFAKWKVD MLKLDGCFST
bmy_01024T0/1-395 LGLKLGIYED MGIFTCMGYP GTTLDKVVQD AQTFAKWKVD MLKLDGCFST
BACU013426/1-384 LGLKLGIYGD VGNFTCMGYP GTTLDKVVQD AQTFAKWKVD MLKLDGCFST
201 250
ENSP00000379680/1-411 PEERAQGYPK MAAALNATGR PIAFSCSWPA YEGGLPPRVN YSLLADICNL
ENSBTAP00000012508/1-411 PQERAEGYPK MAAALNATGR PIAFSCSWPA YEGGLPPKVN YTLLADICNL
ENSTTRP00000016455/1-448 PEERAEGYPK MAAALNATGR PI-FSCSWPA YEGGLPPKVN YTLLVDICNL
bmy_01024T0/1-395 PEERAEGYPK MAAALNATGR PIAFSCSWPA YEGGLPPEVN YTLLADICNL
BACU013426/1-384 PEERAEGYPK MAAALNATGR PIAFSCSWPA YEGGLPPKVN YTLLADICNL
251 300
ENSP00000379680/1-411 WRNYDDIQDS WWSVLSILNW FVEHQDILQP VAGPGHWNDP DMLLIGNFGL
ENSBTAP00000012508/1-411 WRNFDDIQDS WRSVLSVLDW FVTHQDVLQP IAGPGHWNDP DMLLIGNFGL
ENSTTRP00000016455/1-448 WRNYDDIQDS WSSVLSILDW FVTHQDILQP VAGPGHWNDP DMLLIGNFGL
bmy_01024T0/1-395 WRNYDDIQDS WRSVLSILDW FVTHQDILQP VAGPGHWNDP DMLLIGNFGL
BACU013426/1-384 WRNYDDIQDS WRSVLSILDW FVTHQDILQP VAGPGHWNDP DMLLIGNFGL
301 350
ENSP00000379680/1-411 SLEQSRAQMA LWTVLAAPLL MSTDLRTISA QNMDILQNPL MIKINQDPLG
ENSBTAP00000012508/1-411 SFEQARAQMA LWTVLAAPLF MSTDLRTISA QNMDILQNPL MIKINQDPLG
ENSTTRP00000016455/1-448 SFEQARAQMA LWTVLAAPLF MSTDLRTISA QNMDILQNPL MIKINQDPLG
bmy_01024T0/1-395 SFEQARAQMA LWTVLAAPLF MSTDLRTISA QNVDILQNPL MIKINQDPLG
BACU013426/1-384 SFEQARAQMA LWTVLAAPLF MSTDLRTISA QNMDILQNPL MIKINQDPLG
351 400
ENSP00000379680/1-411 IQGRRIHK-- ---------E KSLIEVYMRP LSNKASALVF FSCRTDMPYR
ENSBTAP00000012508/1-411 IQGRRILK-- ---------E KSHIEVYLRP LASEASAIVF FSRRMDMPYH
ENSTTRP00000016455/1-448 IQGRRILK-- ---------E KSYIEVYMRP LASEASAIVF FSRRTDMPYP
bmy_01024T0/1-395 IQGRRILKGP QPVAIFCAQE KSHIEVYVRP LANEASAIVF FSRRTDMPYR
BACU013426/1-384 IQGRRILK-- ---------E KSHIEVYVRP LANEASAIVF FSRRTDMPYH
401 450
ENSP00000379680/1-411 YHSSLGQLNF TGSVIYEAQD VYSGDIISGL RDETNFTVII NPSGVVMWYL
ENSBTAP00000012508/1-411 YHSSLARLNF SSSVVYEAQD VYTGDIISGL QDKTNFTVII NPSGVVMWYL
ENSTTRP00000016455/1-448 YRTSLARLNF TSSKVYEAQN VYTGDIISGL RDKTNFTLII NPSGVVMWYL
bmy_01024T0/1-395 YRASLARLNF SSSKVYEAQN VYTGDIISGL QDKTNFTLII NPSGVVMWYL
BACU013426/1-384 YRTSLARLNF SSSKVYEAQN VYTGDIISGL QDKTNFTLII NPSGVVMWYL
451 500
ENSP00000379680/1-411 YPIKNLEMSQ Q
ENSBTAP00000012508/1-411 YPIRKLEIPQ Q
ENSTTRP00000016455/1-448 Y-IRKLGTPQ Q
bmy_01024T0/1-395 YPIRKLGTPQ Q
BACU013426/1-384 YPIRKLGTPQ Q