KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:12 2014 Check: 00 .. Name: ENSP00000379680/1-411 Len: 461 Check: 1823 Weight: 1.00 Name: ENSBTAP00000012508/1-411 Len: 461 Check: 7981 Weight: 1.00 Name: ENSTTRP00000016455/1-448 Len: 461 Check: 8853 Weight: 1.00 Name: bmy_01024T0/1-395 Len: 461 Check: 1166 Weight: 1.00 Name: BACU013426/1-384 Len: 461 Check: 454 Weight: 1.00 // 1 50 ENSP00000379680/1-411 ---------- ---------- ---------- ---------M LLKTVLLLGH ENSBTAP00000012508/1-411 ---------- ---------- ---------- ---------M LLKTVLLLAL ENSTTRP00000016455/1-448 PGSSDASAFL TFLSFQSPTY RAGKSRADLV RSRDAESRAM LLKTVLLLAL bmy_01024T0/1-395 ---------- ---------- ---------- ---------- ---------- BACU013426/1-384 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000379680/1-411 VAQVLMLDNG LLQTPPMGWL AWERFRCNIN CDEDPKNCIS EQLFMEMADR ENSBTAP00000012508/1-411 ASQVLVLENG LLRKPPMGWL AWERFRCNID CSEDPKNCIS EQLFMEMADR ENSTTRP00000016455/1-448 VAQVLVLENG LLRKPPMGWL AWERFRCNTD CNEDPKNCIS ERLFMEMADR bmy_01024T0/1-395 ---------- ------MGWL AWERFRCNTD CNEDPKNCIS ERLFMEMADR BACU013426/1-384 ---------- ------MGWL AWERFRCNTD CNEDPKNCIS ERLFMEMADR 101 150 ENSP00000379680/1-411 MAQDGWRDMG YTYLNIDDCW IGGRDASGRL MPDPKRFPHG IPFLADYVHS ENSBTAP00000012508/1-411 LAQDGWRDLG YVYLNIDDCW IGGRDAKGNL VPDRKRFPHG IAFLADYAHS ENSTTRP00000016455/1-448 LAQDGWRELG YEYLNIDDCW IGGRDAKGNL VPDPKRFPNG MAFLADYAHS bmy_01024T0/1-395 LAQDGWRDLG YVYLNIDDCW IGGRDAKGNL VPDPKRFPNG MAFLADYAHS BACU013426/1-384 LAQDGWRDLG YVYLNIDDCW IGGRDAKGNL VPDPKRFPNG MAFLADYAHS 151 200 ENSP00000379680/1-411 LGLKLGIYAD MGNFTCMGYP GTTLDKVVQD AQTFAEWKVD MLKLDGCFST ENSBTAP00000012508/1-411 LGLKLGIYED LGNFTCMGYP GTTLDKVVQD AQTFAEWKVD MLKLDGCYST ENSTTRP00000016455/1-448 LGLKLGIYAD MGNFTCMGYP GTTLDKVVQD AQTFAKWKVD MLKLDGCFST bmy_01024T0/1-395 LGLKLGIYED MGIFTCMGYP GTTLDKVVQD AQTFAKWKVD MLKLDGCFST BACU013426/1-384 LGLKLGIYGD VGNFTCMGYP GTTLDKVVQD AQTFAKWKVD MLKLDGCFST 201 250 ENSP00000379680/1-411 PEERAQGYPK MAAALNATGR PIAFSCSWPA YEGGLPPRVN YSLLADICNL ENSBTAP00000012508/1-411 PQERAEGYPK MAAALNATGR PIAFSCSWPA YEGGLPPKVN YTLLADICNL ENSTTRP00000016455/1-448 PEERAEGYPK MAAALNATGR PI-FSCSWPA YEGGLPPKVN YTLLVDICNL bmy_01024T0/1-395 PEERAEGYPK MAAALNATGR PIAFSCSWPA YEGGLPPEVN YTLLADICNL BACU013426/1-384 PEERAEGYPK MAAALNATGR PIAFSCSWPA YEGGLPPKVN YTLLADICNL 251 300 ENSP00000379680/1-411 WRNYDDIQDS WWSVLSILNW FVEHQDILQP VAGPGHWNDP DMLLIGNFGL ENSBTAP00000012508/1-411 WRNFDDIQDS WRSVLSVLDW FVTHQDVLQP IAGPGHWNDP DMLLIGNFGL ENSTTRP00000016455/1-448 WRNYDDIQDS WSSVLSILDW FVTHQDILQP VAGPGHWNDP DMLLIGNFGL bmy_01024T0/1-395 WRNYDDIQDS WRSVLSILDW FVTHQDILQP VAGPGHWNDP DMLLIGNFGL BACU013426/1-384 WRNYDDIQDS WRSVLSILDW FVTHQDILQP VAGPGHWNDP DMLLIGNFGL 301 350 ENSP00000379680/1-411 SLEQSRAQMA LWTVLAAPLL MSTDLRTISA QNMDILQNPL MIKINQDPLG ENSBTAP00000012508/1-411 SFEQARAQMA LWTVLAAPLF MSTDLRTISA QNMDILQNPL MIKINQDPLG ENSTTRP00000016455/1-448 SFEQARAQMA LWTVLAAPLF MSTDLRTISA QNMDILQNPL MIKINQDPLG bmy_01024T0/1-395 SFEQARAQMA LWTVLAAPLF MSTDLRTISA QNVDILQNPL MIKINQDPLG BACU013426/1-384 SFEQARAQMA LWTVLAAPLF MSTDLRTISA QNMDILQNPL MIKINQDPLG 351 400 ENSP00000379680/1-411 IQGRRIHK-- ---------E KSLIEVYMRP LSNKASALVF FSCRTDMPYR ENSBTAP00000012508/1-411 IQGRRILK-- ---------E KSHIEVYLRP LASEASAIVF FSRRMDMPYH ENSTTRP00000016455/1-448 IQGRRILK-- ---------E KSYIEVYMRP LASEASAIVF FSRRTDMPYP bmy_01024T0/1-395 IQGRRILKGP QPVAIFCAQE KSHIEVYVRP LANEASAIVF FSRRTDMPYR BACU013426/1-384 IQGRRILK-- ---------E KSHIEVYVRP LANEASAIVF FSRRTDMPYH 401 450 ENSP00000379680/1-411 YHSSLGQLNF TGSVIYEAQD VYSGDIISGL RDETNFTVII NPSGVVMWYL ENSBTAP00000012508/1-411 YHSSLARLNF SSSVVYEAQD VYTGDIISGL QDKTNFTVII NPSGVVMWYL ENSTTRP00000016455/1-448 YRTSLARLNF TSSKVYEAQN VYTGDIISGL RDKTNFTLII NPSGVVMWYL bmy_01024T0/1-395 YRASLARLNF SSSKVYEAQN VYTGDIISGL QDKTNFTLII NPSGVVMWYL BACU013426/1-384 YRTSLARLNF SSSKVYEAQN VYTGDIISGL QDKTNFTLII NPSGVVMWYL 451 500 ENSP00000379680/1-411 YPIKNLEMSQ Q ENSBTAP00000012508/1-411 YPIRKLEIPQ Q ENSTTRP00000016455/1-448 Y-IRKLGTPQ Q bmy_01024T0/1-395 YPIRKLGTPQ Q BACU013426/1-384 YPIRKLGTPQ Q