KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:14 2014 Check: 00 .. Name: ENSTTRP00000006178/1-644 Len: 646 Check: 289 Weight: 1.00 Name: ENSBTAP00000012520/1-644 Len: 646 Check: 1570 Weight: 1.00 Name: ENSP00000261308/1-646 Len: 646 Check: 3895 Weight: 1.00 Name: bmy_16267T0/1-452 Len: 646 Check: 6367 Weight: 1.00 Name: BACU006229/1-644 Len: 646 Check: 9834 Weight: 1.00 // 1 50 ENSTTRP00000006178/1-644 MAAEGGSESQ LRRRRRRDTE EPEKRKLDEG ELVVAVA--Q ENEEENEERW ENSBTAP00000012520/1-644 MAAECGSDSQ PRRRRRRDPE EPGKTELSAR EPVVAVP--Q ENEEENEERW ENSP00000261308/1-646 MAAESGSDFQ QRRRRRRDPE EPEKTELSER ELAVAVAVSQ ENDEENEERW bmy_16267T0/1-452 ---------- ---------- ---------- ---------- ---------- BACU006229/1-644 MAAEGGSESQ LRRRRRRDPE EPEKTELGEG ELVVAVA--Q ENEEENEERW 51 100 ENSTTRP00000006178/1-644 VGPLPVEAAL VKKRKVLEFE RVYLDNLPSA SMYERSYMHR DVITHVVCTK ENSBTAP00000012520/1-644 VGPLPVEATL AKKRKVLEFE KVYLDNLPSA SMYERSYMHR DVITHVVCTK ENSP00000261308/1-646 VGPLPVEATL AKKRKVLEFE RVYLDNLPSA SMYERSYMHR DVITHVVCTK bmy_16267T0/1-452 ---------- ---------- ---------- ---------- ---------- BACU006229/1-644 VGPLPVEATL VKKRKVLEFE RVYLDNLPSA SMYERSYMHR DVITHVVCTK 101 150 ENSTTRP00000006178/1-644 TDFIITASHD GHVKFWKKVE EGIEFVKHFR SHLGVIESIA ISSEGALFCS ENSBTAP00000012520/1-644 TDFIITASHD GHVKFWKKIE EGIEFVKHFR SHLGVIESIA VSSEGALFCS ENSP00000261308/1-646 TDFIITASHD GHVKFWKKIE EGIEFVKHFR SHLGVIESIA VSSEGALFCS bmy_16267T0/1-452 ---------- ---------- ---------- ---------- ---------- BACU006229/1-644 TDFIITASHD GHVKFWKKVE EGIEFVKHFR SHLGVIESIA ISSEGALFCS 151 200 ENSTTRP00000006178/1-644 VGDDKAMKVF DVVNFDMINM LKLGYFPGQC EWIYCPGDAI SSVAASEKST ENSBTAP00000012520/1-644 VGDDKAMKVF DVVNFDMINM LKLGYFPGQC EWIYCPGDAI SSVAASEKST ENSP00000261308/1-646 VGDDKAMKVF DVVNFDMINM LKLGYFPGQC EWIYCPGDAI SSVAASEKST bmy_16267T0/1-452 ---------- ---------- ----YFPGQC EWIYCPGDAI SSVAASEKST BACU006229/1-644 VGDDKAMKVF DVVNFDMINM LKLGYFPGQC EWIYCPGDAI SSVAASEKST 201 250 ENSTTRP00000006178/1-644 GKIFIYDGRG DNQPLHIFDK LHTSPLTQIR LNPVYKAIVS SDKSGMIEYW ENSBTAP00000012520/1-644 GKIFIYDGRG DNQPLHIFDK LHTSPLTQIR LNPVYKAVVS SDKSGMIEYW ENSP00000261308/1-646 GKIFIYDGRG DNQPLHIFDK LHTSPLTQIR LNPVYKAVVS SDKSGMIEYW bmy_16267T0/1-452 GKIFIYDGRG DNQPLHIFDK LHISPLTQIR LNPVYKAIVS SDKSGMIEYW BACU006229/1-644 GKIFIYDGRG DNQPLHIFDK LHISPLTQIR LNPVYKAIVS SDKSGMIEYW 251 300 ENSTTRP00000006178/1-644 TGPLHEYKFP KNVNWEYKTD TDLYEFAKCK AYPTSICFSP DGKKIATIGS ENSBTAP00000012520/1-644 TGPPYEYKFP KNVNWEYKTD TDLYEFAKCK AYPTSICFSP DGKKLATIGS ENSP00000261308/1-646 TGPPHEYKFP KNVNWEYKTD TDLYEFAKCK AYPTSVCFSP DGKKIATIGS bmy_16267T0/1-452 TGPLHEYKFP KNVNWEYKTD TDLYEFAKCK AYPTSICFSP DGKKIATIGS BACU006229/1-644 TGPLHEYKFP KNVNWEYKTD TDLYEFAKCK SYPTSICFSP DGKKIATIGS 301 350 ENSTTRP00000006178/1-644 DRKVRIFRFL TGKLMRVFDE SLSMFTELQQ MRQQLPDMEF GRRMAVEREL ENSBTAP00000012520/1-644 DRKVRIFRFL TGKLMRVFDE SLSMFTELQQ MRQQLPDMEF GRRMAVEREL ENSP00000261308/1-646 DRKVRIFRFV TGKLMRVFDE SLSMFTELQQ MRQQLPDMEF GRRMAVEREL bmy_16267T0/1-452 DRK------- ---------- ---MFTELQQ MRQQLPDMEF GRRMAVEREL BACU006229/1-644 DRKVRIFRFL TGKLMRVFDE SLSMFTELQQ MRQQLPDMEF GRRMAVEREL 351 400 ENSTTRP00000006178/1-644 EKVDAVRLIN IVFDETGHFV LYGTMLGIKV INVETNRXXX XXXXXXXXXX ENSBTAP00000012520/1-644 EKVDAVRLIN IVFDETGHFV LYGTMLGIKV INVETNRCVR ILGKQENIRV ENSP00000261308/1-646 EKVDAVRLIN IVFDETGHFV LYGTMLGIKV INVETNRCVR ILGKQENIRV bmy_16267T0/1-452 EKVDAVRLIN IVFDETGHFV LYGTMLGIKV INVETNRCVR ILGKQENIRV BACU006229/1-644 EKVDAVRLIN IVFDETGHFV LYGTMLGIKV INVETNRCVR ILGKQENIRV 401 450 ENSTTRP00000006178/1-644 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000012520/1-644 MQLALFQGIA KKHRAATTIE MKASENPVLQ NIQADPTIVC TSFKKNRFYM ENSP00000261308/1-646 MQLALFQGIA KKHRAATTIE MKASENPVLQ NIQADPTIVC TSFKKNRFYM bmy_16267T0/1-452 MQLALFQGIA KKHRAATTIE MKASENPVLQ NIQADPTIVC TSFKKNRFYM BACU006229/1-644 MQLALFQGIA KKHRAATTIE MKASENPVLQ NIQADPTIVC TSFKKNRFYM 451 500 ENSTTRP00000006178/1-644 FTKREPEDTK SADSDRDVFN EKPSKEEVMA ATQAEGPKRV SDSAIIHTSM ENSBTAP00000012520/1-644 FTKREPEDTK SADSDRDVFN EKPSKEEVMA ATQAEGPKRV SDSAIIHTSM ENSP00000261308/1-646 FTKREPEDTK SADSDRDVFN EKPSKEEVMA ATQAEGPKRV SDSAIIHTSM bmy_16267T0/1-452 FTKREPEDTK SADSDRDVFN EKPSKEEVMA ATQAEGPKRV SDSAIIHTSM BACU006229/1-644 FTKREPEDTK SADSDRDVFN EKPSKEEVMA ATQAEGPKRV SDSAIIHTSM 501 550 ENSTTRP00000006178/1-644 GDIHIKLFPV ECPKTVENFC VHSRNGYYNG HTFHRIIKGF MIQTGDPTGT ENSBTAP00000012520/1-644 GDIHIKLFPV ECPKTVENFC VHSRNGYYNG HTFHRIIKGF MIQTGDPTGT ENSP00000261308/1-646 GDIHTKLFPV ECPKTVENFC VHSRNGYYNG HTFHRIIKGF MIQTGDPTGT bmy_16267T0/1-452 GDIHIKLFPV ECPKTVENFC VHSRNGYYNG HTFHRIIKGF MIQTGDPTGT BACU006229/1-644 GDIHIKLFPV ECPKTVENFC VHSRNGYYNG HTFHRIIKGF MIQTGDPTGT 551 600 ENSTTRP00000006178/1-644 GMGGESIWGG EFEDEFHSTL RHDRPYTLSM ANAGSNTNGS QFIITVVPTP ENSBTAP00000012520/1-644 GMGGESIWGG EFEDEFHSTL RHDRPYTLSM ANAGSNTNGS QFFITVVPTP ENSP00000261308/1-646 GMGGESIWGG EFEDEFHSTL RHDRPYTLSM ANAGSNTNGS QFFITVVPTP bmy_16267T0/1-452 GMGGESIWGG EFEDEFHSTL RHDRPYTLSM ANAGSNTNGS QFFITVVPTP BACU006229/1-644 GMGGESIWGG EFEDEFHSTL RHDRPYTLSM ANAGSNTNGS QFFITVVPTP 601 650 ENSTTRP00000006178/1-644 WLDNKHTVFG RVTKGMEVVQ RISNVKVNPK TDKPYEDVSI INITVK ENSBTAP00000012520/1-644 WLDNKHTVFG RVTKGMEVVQ RISNVKVNPK TDKPYEDVSI INITVK ENSP00000261308/1-646 WLDNKHTVFG RVTKGMEVVQ RISNVKVNPK TDKPYEDVSI INITVK bmy_16267T0/1-452 WLDNKHTVFG RVTKGMEVVQ RISNVKVNPK TDKPYEDVSI INITVK BACU006229/1-644 WLDNKHTVFG RVTKGMEVVQ RISNVKVNPK TDKPYEDVSI INITVK