KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:15 2014 Check: 00 .. Name: ENSP00000373772/1-975 Len: 1060 Check: 3528 Weight: 1.00 Name: ENSBTAP00000012521/1-975 Len: 1060 Check: 4031 Weight: 1.00 Name: BACU017592/1-1036 Len: 1060 Check: 4440 Weight: 1.00 Name: bmy_12959T0/1-1024 Len: 1060 Check: 9304 Weight: 1.00 Name: ENSTTRP00000000622/1-977 Len: 1060 Check: 7267 Weight: 1.00 // 1 50 ENSP00000373772/1-975 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012521/1-975 ---------- ---------- ---------- ---------- ---------- BACU017592/1-1036 MVNERGLRHP PFHLFHFPKS LGLGYLFGSG QDIGKVSDDC GFWKRQISPV bmy_12959T0/1-1024 ---------- ---------- -------MFN PNSGKDTRDA RVGKGLKVGE ENSTTRP00000000622/1-977 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000373772/1-975 ---------- -------MSG IGNKRAAGEP GTSMPPEKKA AVEDSGTTVE ENSBTAP00000012521/1-975 ---------- -------MSG IGSKRAAGEP GTSVPPEKKT AVEDSGTTVE BACU017592/1-1036 AGESGYLHGK ELSPCAKMSG TGNKRAAGEP GTSVPPEKKT AVEDSGTTVE bmy_12959T0/1-1024 TMKAVMEHGK ELSSCAKMSG IGNKRAAGEP GTSVPPEKKT AVEDSGTTVE ENSTTRP00000000622/1-977 ---------- -------MSG IGNKRVAGEP GTSVPPEKKT AVEDSGTTVE 101 150 ENSP00000373772/1-975 TIKLGGVSST ---------E ELDIRTLQTK NRKLAEMLDQ RQAIEDELRE ENSBTAP00000012521/1-975 TIKLGGVSST ---------E ELDIRTLQTK NRKLAEMLDQ RQAIEDELRE BACU017592/1-1036 TIKLGSVSST ---------E ELDIRTLQAK NRKLAEMLDQ RQAIEDELRE bmy_12959T0/1-1024 TIKLGSVSST INKTGFLGQE ELDIRTLQAK NRKLAEMLDQ RQAIEDELRE ENSTTRP00000000622/1-977 TIKLGSVSST ---------E ELDIRTLQAK NRKLAEMLDQ RQAIEDELRE 151 200 ENSP00000373772/1-975 HIEKLERRQA TDDASLLIVN RYWSQFDENI RIILKRYDLE QGLGDLLTER ENSBTAP00000012521/1-975 HIEKLERRQA TDDASLLIVN RYWSQFDENI RIILKRYDLE QGLGDLLTER BACU017592/1-1036 HIEKLERRQA TDDASLLIVN RYWSQFDENI RIILKRYDLE QGLGDLLTER bmy_12959T0/1-1024 HIEKLERRQA TDDASLLIVN RYWSQFDENI RIILKRYDLE QGLGDLLTER ENSTTRP00000000622/1-977 HIEKLERRQA TDDASLLIVN RYWSQFDENI RIILKRYDLE QGLGDLLTER 201 250 ENSP00000373772/1-975 KALVVPEPEP DSDSNQERKD DRERGE--GQ EPAFSFLATL ASSSSEEMES ENSBTAP00000012521/1-975 KALVVPEPEP DSDSNQERKD DRERGE--GQ EPAFSFLATL ASSSSEEMES BACU017592/1-1036 KALVVPEPEP DSDSNQERKD DRERGE--GQ EPAFSFLATL ASSSSEEMES bmy_12959T0/1-1024 KALVVPEPEP DSDSNQERKD DRERGE--GQ EPAFSFLATL ASSSSEEMES ENSTTRP00000000622/1-977 KALVVPEPEP DSDSNQERKD DRERGEWEGQ EPAFSFLATL ASSSSEEMES 251 300 ENSP00000373772/1-975 QLQERVESSR RAVSQIVTVY DKLQEKVELL SRKLNSGDNL IVEEAVQELN ENSBTAP00000012521/1-975 QLQERVESSR RAVSQIVTVY DKLQEKVELL SRKLNSGDSL MVEEAVQELN BACU017592/1-1036 QLQERVESSR RAVSQIVTVY DKLQEKVELL SRKLNSGDNL IVEEAVQELN bmy_12959T0/1-1024 QLQERVESSR RAVSQIVTVY DKLQEKVELL SRKLNSGDNL IVEEAVQELN ENSTTRP00000000622/1-977 QLQERVESSR RAVSQIVTVY DKLQEKVELL SRKLNSGDNL IVEEAVQELN 301 350 ENSP00000373772/1-975 SFLAQENMRL QELTDLLQEK HRTMSQEFSK LQSKVETAES RVSVLESMID ENSBTAP00000012521/1-975 SFLAQENTRL QELTDLLQEK HCTMSQEFSK LQSKVETAES RVSVLESMID BACU017592/1-1036 SFLAQEDVRL QELTDLLQEK HCTMSQEFAK LQSKVETAES RVSVLESMID bmy_12959T0/1-1024 SFLAQEDMRL QELTDLLQEK HCTMSQEFXK LQSKVETAES RVSVLESMID ENSTTRP00000000622/1-977 SFLAQEDMRL QELTDLLQEK HCTMSQEFAK LQSKVETAES RVSVLESMID 351 400 ENSP00000373772/1-975 DLQWDIDKIR KREQRLNRHL AEVLER---- ---VNSKGYK VYGAGSSLYG ENSBTAP00000012521/1-975 DLQWDIDKIR KREQRLNRHL AEVLER---- ---VNSKGYK VYGAGSSLYG BACU017592/1-1036 DLQWDIDKIR KREQRLNRHL ---------- ---VNSKGYK VYGAGSSLYG bmy_12959T0/1-1024 DLQWDIDKIR KREQRLNRHL VEVLERASAV LCIVNSKGYK VYGAGSSLYG ENSTTRP00000000622/1-977 DLQWDIDKIR KREQRLNRHL VEVLER---- ---VNSKGYK VYGAGSSLYG 401 450 ENSP00000373772/1-975 GTITINARKF EEMNAELEEN KELAQNRLCE LEKLRQDFEE VTTQNEKLKV ENSBTAP00000012521/1-975 GTITINARKF EEMNAELEEN KELAQNRHCE LEKLRQDFEE VTSQNEKLKV BACU017592/1-1036 GTITINARKF EEMNAELEEN KELAQNRHCE LEKLRQDFEE VTTQNEKLKV bmy_12959T0/1-1024 GTITINARKF EEMNAELEEN KELAQNRHCE LEKLRQDFEE VTTQNEKLKV ENSTTRP00000000622/1-977 GTITINARKF EEMNAELEEN KELAQNRHCE LEKLRQDFEE VTTQNEKLKV 451 500 ENSP00000373772/1-975 ELRSAVEQVV KETPEYRCMQ SQFSVLYNES LQLKAHLDEA RTLLHGTRGT ENSBTAP00000012521/1-975 ELRSAVEEVV KETPEYRCMQ SQFSVLYNES LQLKAHLDEA RTLLHGTRGT BACU017592/1-1036 ELRSAVEEVV KETPEYRCMQ SQFSVLYNES LQLKAHLDEA RTLLHGTRGT bmy_12959T0/1-1024 ELRSAVEEVV KETPEYRCMQ SQFSVLYNES LQLKAHLDEA RTLLHGTRGT ENSTTRP00000000622/1-977 ELRSAVEEVV KETPEYRCMQ SQFSVLYNES LQLKAHLDEA RTLLHGTRGT 501 550 ENSP00000373772/1-975 HQHQVELIER DEVSLHKKLR TEVIQLEDTL AQVRKEYEML RIEFEQTLAA ENSBTAP00000012521/1-975 HQRQVELIER DEVSLHKKLR TEVIQLEDTL AQVRKEYEML RIEFEQTLAA BACU017592/1-1036 HQRQVELIER DEVSLHKKLR TEVIQLEDTL AQVRKEYEML RIEFEQTLAA bmy_12959T0/1-1024 HQRQVELIER DEVSLHKKLR TEVIQLEDTL AQVRKEYEML RIEFEQTLAA ENSTTRP00000000622/1-977 HQRQVELIER DEVSLHKKLR TEVIQLEDTL AQVRKEYEML RIEFEQTLAA 551 600 ENSP00000373772/1-975 NEQAGPINRE MRHLISSLQN HNHQLKGEVL RYKRKLREAQ SDLNKTRLRS ENSBTAP00000012521/1-975 NEQAGPINRE MRHLISSLQN HNHQLKGEVL RYKRKLREAQ SDLNKTRLRS BACU017592/1-1036 NEQAGPINRE MRHLISSLQN HNHQLKGEVL RYKRKLREAQ SDLNKTRLRS bmy_12959T0/1-1024 NEQAGPINRE MRHLISSLQN HNHQLKGEVL RYKRKLREAQ SDLNKTRLRS ENSTTRP00000000622/1-977 NEQAGPINRE MRHLISSLQN HNHQLKGEVL RYKRKLREAQ SDLNKTRLRS 601 650 ENSP00000373772/1-975 GSALLQSQSS TEDPKDEPAE LKPDSEDLSS QSSASKASQE DANEIKSKRD ENSBTAP00000012521/1-975 GSALLQSQSS TEDPKDEPAE LKQDSEDLAT QSAASKASQE EVNEIKSKRD BACU017592/1-1036 GSALLQSQSS TEDPKDEPAE LKQDPEDLSA QSTASKASQE EVNEIKSKRD bmy_12959T0/1-1024 GSALLQSQSS TEDPKDEPAE LKQDPEDLSA QSTASKASQE EVNEIKSKRD ENSTTRP00000000622/1-977 GSALLQSQSS TEDPKDEPAE LKQDPEDLSA QSTASKASQE EVNEIKSKRD 651 700 ENSP00000373772/1-975 EEERERERRE KERERERERE KEKEREREKQ KLKESEKERD SAKDKEKGKH ENSBTAP00000012521/1-975 EEERERERRE KERERERERE KEKEREREKQ KLKESEKERE SAKDKEKGKH BACU017592/1-1036 EEERERERRE KERERERERE KEKEREREKQ KLKESEKERD SAKDKEKGKH bmy_12959T0/1-1024 EEERERERRE KERERERERE KEKEREREKQ KLKESEKERD SAKDKEKGKH ENSTTRP00000000622/1-977 EEERERERRE KERERERERE KEKEREREKQ KLKESEKERD SAKDKEKGKH 701 750 ENSP00000373772/1-975 DDGRKKEAEI IKQLKIELKK AQESQKEMKL LLDMYRSAPK EQRDKVQLMA ENSBTAP00000012521/1-975 DDGRKKEAEI IKQLKIELKK AQESQKEMKL LLDMYRSAPK EQRDKVQLMA BACU017592/1-1036 DDGRKKEAEI IKQLKIELKK AQESQKEMKL LLDMYRSAPK EQRDKVQLMA bmy_12959T0/1-1024 DDGRKKEAEI IKQLKIELKK AQESQKEMKL LLDMYRSAPK EQRDKVQLMA ENSTTRP00000000622/1-977 DDGRKKEAEI IKQLKIELKK AQESQKEMKL LLDMYRSAPK EQRDKVQLMA 751 800 ENSP00000373772/1-975 AEKKSKAELE DLRQRLKDLE DKEKKENKKM ADEDALRKIR AVEEQIEYLQ ENSBTAP00000012521/1-975 AEKKSKAELE DLRQRLKDLE DKEKKENKKM ADEDALRKIR AVEEQIEYLQ BACU017592/1-1036 AEKKSKGELE DLRQRLKDLE DKEKKENKKM ADEDALRKIR AVEEQIEYLQ bmy_12959T0/1-1024 AEKKSKGELE DLRQRLKDLE DKEKKENKKM ADEDALRKIR AVEEQIEYLQ ENSTTRP00000000622/1-977 AEKKSKGELE DLRQRLKDLE DKEKKENKKM ADEDALRKIR AVEEQIEYLQ 801 850 ENSP00000373772/1-975 KKLAMAKQEE EALLSEMDVT GQAFEDMQEQ NIRLMQQLRE KDDANFKLMS ENSBTAP00000012521/1-975 KKLAMAKQEE EALLSEMDVT GQAFEDMQEQ NIRLMQQLRE KDDANFKLMS BACU017592/1-1036 KKLAMAKQEE EALLSEMDVT GQAFEDMQEQ NIRLMQQLRE KDDANFKLMS bmy_12959T0/1-1024 KKLAMAKQEE EALLSEMDVT GQAFEDMQEQ NIRLMQQLRE KDDANFKLMS ENSTTRP00000000622/1-977 KKLAMAKQEE EALLSEMDVT GQAFEDMQEQ NIRLMQQLRE KDDANFKLMS 851 900 ENSP00000373772/1-975 ERIKSNQIHK LLKEEKEELA DQVLTLKTQV DAQLQVVRKL EEKEHLLQSN ENSBTAP00000012521/1-975 ERIKSNQIHK LLKEEKEELA DQVLTLKTQV DAQLQVVRKL EEKEHLLQSN BACU017592/1-1036 ERIKSNQIHK LLKEEKEELA DQVLTLKTQV DAQLQVVRKL EEKEHLLQSN bmy_12959T0/1-1024 ERIKSNQIHK LLKEEKEELA D-------QV DAQLQVVRKL EEKEHLLQSN ENSTTRP00000000622/1-977 ERIKSNQIHK LLKEEKEELA DQVLTLKTQV DAQLQVVRKL EEKEHLLQSN 901 950 ENSP00000373772/1-975 IGTGEKELGL RTQALEMNKR KAMEAAQLAD DLKAQLELAQ KKLHDFQDEI ENSBTAP00000012521/1-975 IGTGEKELGL RTQALEMNKR KAMEAAQLAD DLKAQLEMAQ KKLHDFQDEI BACU017592/1-1036 IGTGEKELGL RTQALEMNKR KAMEAAQLAD DLKAQLELAQ KKLHDFQDEI bmy_12959T0/1-1024 IGTGEKELGL RTQALEMNKR KAMEAAQLAD DLKAQLELAQ KKLHDFQDEI ENSTTRP00000000622/1-977 IGTGEKELGL RTQALEMNKR KAMEAAQLAD DLKAQLELAQ KKLHDFQDEI 951 1000 ENSP00000373772/1-975 VENSVTKEKD MFNFKRAQED ISRLRRKLET TKKPDNVPKC DEILMEEIKD ENSBTAP00000012521/1-975 VENSVTKEKD MFNFKRAQED ISRLRRKLET TKKPDNVPKC DEILMEEIKD BACU017592/1-1036 VENSVTKEKD MFNFKRAQED ISRLRRKLET TKKPDNVPKC DEILMEEIKD bmy_12959T0/1-1024 VENSVTKEKD MFNFKRAQED ISRLRRKLET TKKPDNVPKC DEILMEEIKD ENSTTRP00000000622/1-977 VENSVTKEKD MFNFKRAQED ISRLRRKLET TKKPDNVPKC DEILMEEIKD 1001 1050 ENSP00000373772/1-975 YKARLTCPCC NMRKKDAVLT KCFHVFCFEC VKTRYDTRQR KCPKCNAAFG ENSBTAP00000012521/1-975 YKARLTCPCC NMRKKDAVLT KCFHVFCFEC VKTRYDTRQR KCPKCNAAFG BACU017592/1-1036 YKARLTCPCC NMRKKDAVLT KCFHVFCFEC VKTRYDTRQR KCPKCNAAFG bmy_12959T0/1-1024 YKARLTCPCC NMRKKDAVLT KCFHVFCFEC VKTRYDTRQR KCPKCNAAFG ENSTTRP00000000622/1-977 YKARLTCPCC NMRKKDAVLT KCFHVFCFEC VKTRYDTRQR KCPKCNAAFG 1051 1100 ENSP00000373772/1-975 ANDFHRIYIG ENSBTAP00000012521/1-975 ANDFHRIYIG BACU017592/1-1036 ANDFHRIYIG bmy_12959T0/1-1024 ANDFHRIYIG ENSTTRP00000000622/1-977 ANDFHRIYIG