KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:16 2014 Check: 00 .. Name: bmy_16268T0/1-432 Len: 598 Check: 3714 Weight: 1.00 Name: ENSBTAP00000012526/1-581 Len: 598 Check: 9096 Weight: 1.00 Name: ENSP00000231524/1-574 Len: 598 Check: 2378 Weight: 1.00 Name: BACU019188/1-574 Len: 598 Check: 3396 Weight: 1.00 Name: ENSTTRP00000006183/1-574 Len: 598 Check: 4395 Weight: 1.00 // 1 50 bmy_16268T0/1-432 MELLEMVLSH VPPHVLLGHC RRVCRCWRDL VDCQDVRLSI LARDRAALSP ENSBTAP00000012526/1-581 --MAALVVNK PGAGLDSGRQ GSRGTAVVKV LEC-GVCEDV FSLQGDKVPR ENSP00000231524/1-574 --MATLVVNK LGAGVDSGRQ GSRGTAVVKV LEC-GVCEDV FSLQGDKVPR BACU019188/1-574 --MAALVVNK PGAGLDSGRQ GSRGTAVVKV LEC-GVCEDV FSLQGDKVPR ENSTTRP00000006183/1-574 --MATLVVNK PGAGLDSGRQ GSRGTAVVKV LEC-GVCEDV FSLQGDKVPR 51 100 bmy_16268T0/1-432 VLHTYLPPAD DLRPCILGCF CERGPIERNL LRNPKGLEGF RDWTMQSSGD ENSBTAP00000012526/1-581 LLLCGHTVCH D---CL---- -TRLPLHGRA IRCP------ FDRQVTELGD ENSP00000231524/1-574 LLLCGHTVCH D---CL---- -TRLPLHGRA IRCP------ FDRQVTDLGD BACU019188/1-574 LLLCGHTVCH D---CL---- -TRLPLHGRA IRCP------ FDRQVTDLGD ENSTTRP00000006183/1-574 LLLCGHTVCH D---CL---- -TRLPLHGRA IRCP------ FDRQVTDLGD 101 150 bmy_16268T0/1-432 G--WGEEEN- --LELLERLQ NGHIGQYGAA EEAIGISGE- ---------- ENSBTAP00000012526/1-581 SGVWGLKKNF ALLELLERLQ NGHSGQYGAA EEAIGISGES IIRCDEDEAH ENSP00000231524/1-574 SGVWGLKKNF ALLELLERLQ NGPIGQYGAA EESIGISGES IIRCDEDEAH BACU019188/1-574 SGVWGLKKNF ALLELLERLQ NGHIGQYGAA EEAIGISGES IIRCDEDEAH ENSTTRP00000006183/1-574 SGVWGLKKNF ALLELLERLQ NGHIGQYGAA EEAIGISGES IIRCDEDEAH 151 200 bmy_16268T0/1-432 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012526/1-581 VASVYCTVCA THLCSECSQV THSTKTLAKH RRVPLADKPH EKTMCSQHQV ENSP00000231524/1-574 LASVYCTVCA THLCSECSQV THSTKTLAKH RRVPLADKPH EKTMCSQHQV BACU019188/1-574 VASVYCTVCA THLCSECSQV THSTKTLAKH RRVPLADKPH EKTMCSQHQV ENSTTRP00000006183/1-574 VASVYCTVCA THLCSECSQV THSTKTLAKH RRVPLADKPH EKTMCSQHQV 201 250 bmy_16268T0/1-432 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012526/1-581 HAIEFVCLED GCQTSPLMCC VCKEYGKHQG HKHSVLEPEA NQIRASILDM ENSP00000231524/1-574 HAIEFVCLEE GCQTSPLMCC VCKEYGKHQG HKHSVLEPEA NQIRASILDM BACU019188/1-574 HAIEFVCLED GCQTSPLMCC VCKEYGKHQG HKHSVLEPEA NQIRASILDM ENSTTRP00000006183/1-574 HAIEFVCLED GCQTSPLMCC VCKEYGKHQG HKHSVLEPEA NQIRASILDM 251 300 bmy_16268T0/1-432 ---------- ---------- ---------- ---------- ---VPGTAEN ENSBTAP00000012526/1-581 AHCIRTFTEE ISDYSRKLVG IVQHIEGGEQ IVEDGIGMAH TEHVPGTAEN ENSP00000231524/1-574 AHCIRTFTEE ISDYSRKLVG IVQHIEGGEQ IVEDGIGMAH TEHVPGTAEN BACU019188/1-574 AHCIRTFTEE ISDYSRKLGG IVQHIEGGEQ IVEDGIGMAH TEHVPGTAEN ENSTTRP00000006183/1-574 AHCIRTFTEE ISDYSRKLVG IVQHIERGEQ IVEDGIGMAH TEHVPGTAEN 301 350 bmy_16268T0/1-432 ARSCVRAYFS DLHETLCRQE EMALSVVDAH VREKLIWLRQ QQEDMTILLS ENSBTAP00000012526/1-581 ARSCVRAYFS DLHETLCRQE EMALSVVDAH VREKLIWLRQ QQEDMTILLS ENSP00000231524/1-574 ARSCIRAYFY DLHETLCRQE EMALSVVDAH VREKLIWLRQ QQEDMTILLS BACU019188/1-574 ARSCVRAYFS DLHETLCRQE EMALSVVDAH VREKLIWLRQ QQEDMTILLS ENSTTRP00000006183/1-574 ARSCVRAYFS DLHETLCRQE EMALSVVDAH VREKLIWLRQ QQEDMTILLS 351 400 bmy_16268T0/1-432 QVSTACLHCE KTLQQDDCRV VLAKQEITRL LETLQKQQQQ FTEVADHIQL ENSBTAP00000012526/1-581 QVSTACLHCE KTLQQDDCRV VLAKQEITRL LETLQKQQQQ FTEIADHIQL ENSP00000231524/1-574 EVSAACLHCE KTLQQDDCRV VLAKQEITRL LETLQKQQQQ FTEVADHIQL BACU019188/1-574 QVSTACLHCE KTLQQDDCRV VLAKQEITRL LETLQKQQQQ FTEVADHIQL ENSTTRP00000006183/1-574 QVSTACLHCE KTLQQDDCRV VLAKQEITRL LETLQKQQQQ FTEVADHIQL 401 450 bmy_16268T0/1-432 DASIPVTFTK DNRVHIGPKM EIRVVTLGLD GAGKTTILFK LKQDEFMQPI ENSBTAP00000012526/1-581 DASIPVTFTK DNRVHIGPKM EIRVVTLGLD GAGKTTILFK LKQDEFMQPI ENSP00000231524/1-574 DASIPVTFTK DNRVHIGPKM EIRVVTLGLD GAGKTTILFK LKQDEFMQPI BACU019188/1-574 DASIPVTFTK DNRVHIGPKM EIRVVTLGLD GAGKTTILFK LKQDEFMQPI ENSTTRP00000006183/1-574 DASIPVTFTK DNRVHIGPKM EIRVVTLGLD GAGKTTILFK LKQDEFMQPI 451 500 bmy_16268T0/1-432 PTIGFNVETV EYKNLKFTIW DVGGKHKLRP LWKHYYLNTQ AVVFVVDSSH ENSBTAP00000012526/1-581 PTIGFNVETV EYKNLKFTIW DVGGKHKLRP LWKHYYLNTQ AVVFVVDSSH ENSP00000231524/1-574 PTIGFNVETV EYKNLKFTIW DVGGKHKLRP LWKHYYLNTQ AVVFVVDSSH BACU019188/1-574 PTIGFNVETV EYKNLKFTIW DVGGKHKLRP LWKHYYLNTQ AVVFVVDSSH ENSTTRP00000006183/1-574 PTIGFNVETV EYKNLKFTIW DVGGKHKLRP LWKHYYLNTQ AVVFVVDSSH 501 550 bmy_16268T0/1-432 RDRVSEAHSE LAKLLTEKEL RDALLLIFAN KQDVAGALSV EEITELLSLH ENSBTAP00000012526/1-581 RDRVSEAHSE LAKLLTEKEL RDALLLIFAN KQDVAGALSV DEITELLSLH ENSP00000231524/1-574 RDRISEAHSE LAKLLTEKEL RDALLLIFAN KQDVAGALSV EEITELLSLH BACU019188/1-574 RDRVSEAHNE LAKLLTEKEL RDALLLIFAN KQDVAGALSV EEITELLSLH ENSTTRP00000006183/1-574 RDRVSEAHSE LAKLLTEKEL RDALLLIFAN KQDVAGALSV EEITELLSLH 551 600 bmy_16268T0/1-432 KLCCGRSWYI QGCDARSGMG LYEGLDWLSR QLVAAGV--- --LDVA-- ENSBTAP00000012526/1-581 KLCCGRSWYI QGCDARSGMG LYEGLDWLTP TCGCWGVGRC LILDVAVV ENSP00000231524/1-574 KLCCGRSWYI QGCDARSGMG LYEGLDWLSR QLVAAGV--- --LDVA-- BACU019188/1-574 KLCCGRSWYI QGCDARSGMG LYEGLDWLSR QLVAAGV--- --LDVA-- ENSTTRP00000006183/1-574 KLCCGRSWYI QGCDARSGMG LYEGLDWLSR QLVAAGV--- --LDVA--