KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:17 2014 Check: 00 .. Name: BACU008969/1-237 Len: 269 Check: 8546 Weight: 1.00 Name: ENSBTAP00000012530/1-217 Len: 269 Check: 1935 Weight: 1.00 Name: ENSTTRP00000003956/1-211 Len: 269 Check: 4110 Weight: 1.00 Name: ENSP00000425561/1-248 Len: 269 Check: 3914 Weight: 1.00 Name: bmy_16079T0/1-211 Len: 269 Check: 4488 Weight: 1.00 // 1 50 BACU008969/1-237 MATVEPETTP TPNPPPT-EE KTESNQEVAN PEHYIKHPLQ NRWALWFFKN ENSBTAP00000012530/1-217 MATVEPETTP TPNPPPTEEE KTESNQEVAN PEHYIKHPLQ NRWALWFFKN ENSTTRP00000003956/1-211 ------ETTP TPNPPPTEEE KTESNQEVAN PEHYIKHPLQ NRWALWFFKN ENSP00000425561/1-248 MATVEPETTP TPNPPTTEEE KTESNQEVAN PEHYIKHPLQ NRWALWFFKN bmy_16079T0/1-211 ------ETTP TPNPPPTEEE KTESNQEVAN PEHYIKHPLQ NRWALWFFKN 51 100 BACU008969/1-237 DKSKTWQANL RLISKFDTVE DFWALYNHIQ LSSNLMPGCD YSLFKDGIEP ENSBTAP00000012530/1-217 DKSKTWQANL RLISKFDTVE DFWALYNHIQ LSSNLMPGCD YSLFKDGIEP ENSTTRP00000003956/1-211 DKSKTWQANL RLISKFDTVE DFWALYNHIQ LSSNLMPGCD YSLFKDGIEP ENSP00000425561/1-248 DKSKTWQANL RLISKFDTVE DFWALYNHIQ LSSNLMPGCD YSLFKDGIEP bmy_16079T0/1-211 DKSKTWQANL RLISKFDTVE DFWALYNHIQ LSSNLMPGCD YSLFKDGIEP 101 150 BACU008969/1-237 MWEDEKNKRG GRWLITLTKQ QRRSDLDRFW LET------- ---------- ENSBTAP00000012530/1-217 MWEDEKNKRG GRWLITLNKQ QRRSDLDRFW LET------- ---------- ENSTTRP00000003956/1-211 MWEDEKNKRG GRWLITLNKQ QRRSDLDRFW LET------- ---------- ENSP00000425561/1-248 MWEDEKNKRG GRWLITLNKQ QRRSDLDRFW LETRWDLAML PRLVSNFWPQ bmy_16079T0/1-211 MWEDEKNKRG GRWLITLNKQ QRRSDLDRFW LET------- ---------- 151 200 BACU008969/1-237 ---------- ----LLCLIG ESFDDYSDDV CGAVVNIRAK GDKIAIWTTE ENSBTAP00000012530/1-217 ---------- ----VLCLIG ESFDDYSDDV CGAVVNVRAK GDKIAIWTTE ENSTTRP00000003956/1-211 ---------- ----LLCLIG ESFDDYSDDV CGAVVNVRAK GDKIAIWTTE ENSP00000425561/1-248 VILPLQPPKV LELQLLCLIG ESFDDYSDDV CGAVVNVRAK GDKIAIWTTE bmy_16079T0/1-211 ---------- ----LLCLIG ESFDDYSDDV CGAVVNVRAK GDKIAIWTTE 201 250 BACU008969/1-237 YENREAVTYI GRVYKERLGL PPKIVIGYQS HADTATKSGS TTKNRFVVLR ENSBTAP00000012530/1-217 CENREAVTHI GRVYKERLGL PPKIVIGYQS HADTATKSGS TTKNRFVV-- ENSTTRP00000003956/1-211 CENKEAVTHI GRVYKERLGL PPKIVIGYQS HADTATKSGS TTKNRFVV-- ENSP00000425561/1-248 CENREAVTHI GRVYKERLGL PPKIVIGYQS HADTATKSGS TTKNRFVV-- bmy_16079T0/1-211 CENREAVTHI GRVYKERLGL PPKIVIGYQS HADTATKSGS TTKNRFVV-- 251 300 BACU008969/1-237 RHLLSILIGD CVKQSRFGS ENSBTAP00000012530/1-217 ---------- --------- ENSTTRP00000003956/1-211 ---------- --------- ENSP00000425561/1-248 ---------- --------- bmy_16079T0/1-211 ---------- ---------