KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:47:18 2014  Check: 00 ..

 Name: ENSP00000268668/1-172     Len:    178  Check:  7659  Weight:  1.00
 Name: ENSBTAP00000012542/1-176  Len:    178  Check:  7689  Weight:  1.00
 Name: ENSTTRP00000010803/1-169  Len:    178  Check:  653  Weight:  1.00
 Name: bmy_02696T0/1-95          Len:    178  Check:  2288  Weight:  1.00
 Name: BACU009219/1-176          Len:    178  Check:  6983  Weight:  1.00

//


                          1                                                   50
ENSP00000268668/1-172     MPDSWDKDVY PEPPRRTPVQ ------PNPI VYMMKAFDLI VDRPVTLVRE 
ENSBTAP00000012542/1-176  MPDSWDKDVY PEPPRRTPAP SPQTSLPNPI TYLTKAFDLL VDRPVTLVRE 
ENSTTRP00000010803/1-169  MPDSWDNNVY PEPPRRTPAP ------TNPI TYFTKAFDLL VDRPVTLARX 
bmy_02696T0/1-95          MPDSWDNNVY PEPPRRTPAP SPQTSLTNPI TYFTKAFDLL VDRPVTLARE 
BACU009219/1-176          MPDSWDNNVY PEPPRRTPAP SPQTSLTNPI TYFTKAFDLL VDRPVTLARE 


                          51                                                 100
ENSP00000268668/1-172     FIERQHAKNR YYYYHRQYRR VPDITECKEE DIMCMYEAEM QWKRDYKVDQ 
ENSBTAP00000012542/1-176  FIERQHAKNK YYYYHREFRR VPDITECQEK DVLCMFEAEM QWRRDYKVDQ 
ENSTTRP00000010803/1-169  XXERQHAKNR -YYYHREFRR VPDITECEEK DILCMFEAEM QWRRDYKVDQ 
bmy_02696T0/1-95          FIERQHAKNR YYYYHREFRR VPDITECKEK DILCMFEAEM QWRRD----- 
BACU009219/1-176          FIERQHAKNR YYYYHREFRR VPDITECKEK DILCMFEAEM QWRRDYKVDQ 


                          101                                                150
ENSP00000268668/1-172     EIINIMQDRL KACQQREGQN YQQNCIKEVE QFTQVAKAYQ DRYQDLGAYS 
ENSBTAP00000012542/1-176  EIVNIIQERL KACQQREGES HRQNCAKELE QFTQVVKAYQ DRYHDLGAHY 
ENSTTRP00000010803/1-169  EIVNIIQERL KACQQREGES YRQNCTKELE QFTQVAKAYQ DRYHDLGAHY 
bmy_02696T0/1-95          ---------- ---------- ---------- ---------- ---------- 
BACU009219/1-176          EIVNIIQERL KACQQREGES YRQNCAKELE QFTQVAKAYQ DRYHDLGAHY 


                          151                                                200
ENSP00000268668/1-172     SARKCLAKQR QRMLQERKAA KEAAAATS 
ENSBTAP00000012542/1-176  SARKCLAKQK QRMLAERKAA KEAAAA-- 
ENSTTRP00000010803/1-169  SARKCLAKQK QRMLAERKAT KETAAA-- 
bmy_02696T0/1-95          ---------- ---------- -------- 
BACU009219/1-176          SARKCLAKQK QRMLAERKAT KEAAAA--