KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:18 2014 Check: 00 .. Name: BACU014411/1-297 Len: 330 Check: 6355 Weight: 1.00 Name: ENSP00000341885/1-293 Len: 330 Check: 4423 Weight: 1.00 Name: ENSTTRP00000010804/1-296 Len: 330 Check: 5255 Weight: 1.00 Name: bmy_02697T0/1-326 Len: 330 Check: 3286 Weight: 1.00 Name: ENSBTAP00000012544/1-293 Len: 330 Check: 4706 Weight: 1.00 // 1 50 BACU014411/1-297 ---------- ---------- ----MADDAG DA-------- -RGPGGLGGP ENSP00000341885/1-293 ---------- ---------- ----MADDAG AA-------- -GGPGGPGGP ENSTTRP00000010804/1-296 ---------- ---------- ----MADDAG AA------GG PGGPGGPGGP bmy_02697T0/1-326 MASSASGSEH PGILRVEDEI RDQQMADDAG AAGGPGGPGG PGGPGGPGGP ENSBTAP00000012544/1-293 ---------- ---------- ----MADDAG AA-------- -GGPGGPGGP 51 100 BACU014411/1-297 GMGGRGGFRA GFCSGVRGGG RGRVRGRGRG RGRGRGAHRG EAEDKEWFPV ENSP00000341885/1-293 GMGNRGGFRG GFGSGIRGRG RGR----GRG RGRGRGARGG KAEDKEWMPV ENSTTRP00000010804/1-296 GMGSRGGFRG GFGSGVRGRG RGR----GRG RGRGRGARGG KAEDKEWLPV bmy_02697T0/1-326 GMGGRGGFRG GFGSGVRGRG RGR----GRG RGRGRGARGG KAEDKEWLPV ENSBTAP00000012544/1-293 GMGGRGGFRG GFGSGVRGRG RGR----GRG RGRGRGARGG KAEDKEWLPV 101 150 BACU014411/1-297 AKPGRLVRDM KIKSLEEICL FSLPIRESEI IDFFLGASLK DEVLKIMPVQ ENSP00000341885/1-293 TKLGRLVKDM KIKSLEEIYL FSLPIKESEI IDFFLGASLK DEVLKIMPVQ ENSTTRP00000010804/1-296 TKLGRLVKDM KIKSLEEIYL FSLPIKESEI IDFFLGASLK DEVLKIMPVQ bmy_02697T0/1-326 TKLGRLVKDM KIKSLEEIYL FSLPIKESEI IDFFLGASLK DEVLKIMPVQ ENSBTAP00000012544/1-293 TKLGRLVKDM KIKSLEEIYL FSLPIKESEI IDFFLGASLK DEVLKIMPVQ 151 200 BACU014411/1-297 KQTRAGQRTR FKAFVAIGDY NGRVGLGVKC SKEVATAIRR AIVLAKLCIV ENSP00000341885/1-293 KQTRAGQRTR FKAFVAIGDY NGHVGLGVKC SKEVATAIRG AIILAKLSIV ENSTTRP00000010804/1-296 KQTRAGQRTR FKAFVAIGDY NGHVGLGVKC SKEVATAIRG AIILAKLSIV bmy_02697T0/1-326 KQTRAGQRTR FKAFVAIGDY NGHVGLGVKC SKEVATAIRG AIILAKLSIV ENSBTAP00000012544/1-293 KQTRAGQRTR FKAFVAIGDY NGHVGLGVKC SKEVATAIRG AIILAKLSIV 201 250 BACU014411/1-297 PVRRGYWGNK VGKPHTVSCK VAGRCGCVLV RLIPAPRGTG IVSAPVPKKL ENSP00000341885/1-293 PVRRGYWGNK IGKPHTVPCK VTGRCGSVLV RLIPAPRGTG IVSAPVPKKL ENSTTRP00000010804/1-296 PVRRGYWGNK IGKPHTVPCK VTGRCGSVLV RLIPAPRGTG IVSAPVPKKL bmy_02697T0/1-326 PVRRGYWGNK IGKPHTVPCK VTGRCGSVLV RLIPAPRGTG IVSAPVPKKL ENSBTAP00000012544/1-293 PVRRGYWGNK IGKPHTVPCK VTGRCGSVLV RLIPAPRGTG IVSAPVPKKL 251 300 BACU014411/1-297 LMVARIDDCY TSARACTATL GNFSKATFDA ISKTYSYLTP DLWKEMVFTK ENSP00000341885/1-293 LMMAGIDDCY TSARGCTATL GNFAKATFDA ISKTYSYLTP DLWKETVFTK ENSTTRP00000010804/1-296 LMMAGIDDCY TSARGCTATL GNFAKATFDA ISKTYSYLTP DLWKETVFTK bmy_02697T0/1-326 LMMAGIDDCY TSARGCTATL GNFAKATFDA ISKTYSYLTP DLWKETVFTK ENSBTAP00000012544/1-293 LMMAGIDDCY TSARGCTATL GNFAKATFDA ISKTYSYLTP DLWKETVFTK 301 350 BACU014411/1-297 SPYQEFTDRL VKTHTRVSVQ RTQTPALATT ENSP00000341885/1-293 SPYQEFTDHL VKTHTRVSVQ RTQAPAVATT ENSTTRP00000010804/1-296 SPYQEFTDHL VKTHTRVSVQ RTQAPAVATT bmy_02697T0/1-326 SPYQEFTDHL VKTHTRVSVQ RTQAPAVATT ENSBTAP00000012544/1-293 SPYQEFTDHL VKTHTRVSVQ RTQAPAVATT