KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:21 2014 Check: 00 .. Name: ENSTTRP00000006452/1-1217 Len: 1292 Check: 1759 Weight: 1.00 Name: ENSP00000392043/1-1220 Len: 1292 Check: 9964 Weight: 1.00 Name: bmy_02210T0/1-1242 Len: 1292 Check: 2116 Weight: 1.00 Name: BACU000988/1-1227 Len: 1292 Check: 1715 Weight: 1.00 Name: ENSBTAP00000012570/1-1220 Len: 1292 Check: 9619 Weight: 1.00 // 1 50 ENSTTRP00000006452/1-1217 MGDMANNSVA YGGVKNSLKE ANHDGDFGIT LAELRALMEL RSTDALRKIQ ENSP00000392043/1-1220 MGDMANNSVA YSGVKNSLKE ANHDGDFGIT LAELRALMEL RSTDALRKIQ bmy_02210T0/1-1242 MGDMANNSVA YGGVKNSLKE ANHDGDFGIT LAELRALMEL RSTDALRKIQ BACU000988/1-1227 MGDMANNSVA YGGVKNSLKE ANHDGDFGIT LAELRALMEL RSTDALRKIQ ENSBTAP00000012570/1-1220 MGDMANNSVA YGGVKNSLKE ANHDGDFGIT LAELRALMEL RSTDALRKIQ 51 100 ENSTTRP00000006452/1-1217 ESYGDVYGIC ARLKTSPNEG LSGNPADIER REAVFGKNFI PPKKPKTFLQ ENSP00000392043/1-1220 ESYGDVYGIC TKLKTSPNEG LSGNPADLER REAVFGKNFI PPKKPKTFLQ bmy_02210T0/1-1242 ESYGDVYGIC ARLKTSPNEG LSGNPADIER REAVFGKNFI PPKKPKTFLQ BACU000988/1-1227 ESYGDVYGIC TRLKTSPNEG LSGNPADIER REAVFGKNFI PPKKPKTFLQ ENSBTAP00000012570/1-1220 ESYGDVYGIC TRLKTSPNEG LSGNPVDIER REAVFGKNFI PPKKPKTFLQ 101 150 ENSTTRP00000006452/1-1217 LVWEALQDVT LIILEIAAIV SLGLSFYQPP EGDNA----- ---------- ENSP00000392043/1-1220 LVWEALQDVT LIILEIAAIV SLGLSFYQPP EGDNA----- ---------- bmy_02210T0/1-1242 LVWEALQDVT LIILEIAAIV SLGLSFYQPP EGDNAHYKKT EEKYFQWEIF BACU000988/1-1227 LVWEALQDVT LIILEIAAIV SLGLSFYQPP EGDNA----- ---------- ENSBTAP00000012570/1-1220 LVWEALQDVT LIILEIAAIV SLGLSFYQPP EGDNA----- ---------- 151 200 ENSTTRP00000006452/1-1217 ---------- LCGDVSVGEE EGEGETGWIE GAAILLSVVC VVLVTAFNDW ENSP00000392043/1-1220 ---------- LCGEVSVGEE EGEGETGWIE GAAILLSVVC VVLVTAFNDW bmy_02210T0/1-1242 FDKHLLSFQI VCGDVSVGEE EGEGETGWIE GAAILLSVVC VVLVTAFNDW BACU000988/1-1227 ---------- LCGDVSVGEE EGEGETGWIE GAAILLSVVC VVLVTAFNDW ENSBTAP00000012570/1-1220 ---------- LCGDVSVGEE EGEGETGWIE GAAILLSVVC VVLVTAFNDW 201 250 ENSTTRP00000006452/1-1217 SKEKQFRGLQ SRIEQEQKFT VIRGGQVIQI PVADITVGDI AQVKYGDFLP ENSP00000392043/1-1220 SKEKQFRGLQ SRIEQEQKFT VIRGGQVIQI PVADITVGDI AQVKYGDLLP bmy_02210T0/1-1242 SKEKQFRGLQ SRIEQEQKFT VIRGGQVIQI PVADITVGDI AQVKYGDLLP BACU000988/1-1227 SKEKQFRGLQ SRIEQEQKFT VIRGGQVIQI PVADITVGDI AQVKYGDLLP ENSBTAP00000012570/1-1220 SKEKQFRGLQ SRIEQEQKFT VIRGGQVIQI PVADITVGDI AQVKYGDLLP 251 300 ENSTTRP00000006452/1-1217 ADGILIQGND LKIDESSLTG ESDHVKKSLD KDPLLLSGTH VMEGSGRMVV ENSP00000392043/1-1220 ADGILIQGND LKIDESSLTG ESDHVKKSLD KDPLLLSGTH VMEGSGRMVV bmy_02210T0/1-1242 ADGILIQGND LKIDESSLTG ESDHVKKSLD KDPLLLSGTH VMEGSGRMVV BACU000988/1-1227 ADGILIQGND LKIDESSLTG ESDHVKKSLD KDPLLLSGTH VMEGSGRMVV ENSBTAP00000012570/1-1220 ADGILIQGND LKIDESSLTG ESDHVKKSLD KDPLLLSGTH VMEGSGRMVV 301 350 ENSTTRP00000006452/1-1217 TAVGINSQTG IIFTLLGAGG EEEEKKDEKK KEKKNKKQDG AIENRNK--- ENSP00000392043/1-1220 TAVGVNSQTG IIFTLLGAGG EEEEKKDEKK KEKKNKKQDG AIENRNK--- bmy_02210T0/1-1242 TAVGINSQTG IIFTLLGAGG EEEEKKDEKK KEKKNKKQDG AIENRNKVKL BACU000988/1-1227 TAVGINSQTG IIFTLLGAGG EEEEKKDEKK KEKKNKKQDG AIENRNKVKL ENSBTAP00000012570/1-1220 TAVGINSQTG IIFTLLGAGG EEEEKKDEKK KEKKNKKQDG AIENRNK--- 351 400 ENSTTRP00000006452/1-1217 ------AKAQ DGAAMEMQPL KSEEGGDGDE KDKKKANLPK KEKSVLQGKL ENSP00000392043/1-1220 ------AKAQ DGAAMEMQPL KSEEGGDGDE KDKKKANLPK KEKSVLQGKL bmy_02210T0/1-1242 YLLFDVAKAQ DGAAMEMQPL KSEEGGDGDE KDKKKANLPK KEKSVLQGKL BACU000988/1-1227 YLLFDAAKAQ DGAAMEMQPL KSEEGGDGDE KDKKKANLPK KEKSVLQGKL ENSBTAP00000012570/1-1220 ------AKAQ DGAAMEMQPL KSEEGGDGDE KDKKKANLPK KEKSVLQGKL 401 450 ENSTTRP00000006452/1-1217 TKLAVQIGKA GLLMSAITVI ILVLYFVIDT FWVQKRPWLA ECTPIYIQYF ENSP00000392043/1-1220 TKLAVQIGKA GLLMSAITVI ILVLYFVIDT FWVQKRPWLA ECTPIYIQYF bmy_02210T0/1-1242 TKLAVQIGKA GLLMSAITVI ILVLYFVIDT FWVQKRPWLA ECTPIYIQYF BACU000988/1-1227 TKLAVQIGKA GLLMSAITVI ILVLYFVIDT FWVQKRPWLA ECTPIYIQYF ENSBTAP00000012570/1-1220 TKLAVQIGKA GLLMSAITVI ILVLYFVIDT FWVQKRPWLA ECTPIYIQYF 451 500 ENSTTRP00000006452/1-1217 VKFFIIGVTV LVVAVPEGLP LAVTISLAYS VKKMMKDNNL VRHLDACETM ENSP00000392043/1-1220 VKFFIIGVTV LVVAVPEGLP LAVTISLAYS VKKMMKDNNL VRHLDACETM bmy_02210T0/1-1242 VKFFIIGVTV LVVAVPEGLP LAVTISLAYS VKKMMKDNNL VRHLDACETM BACU000988/1-1227 VKFFIIGVTV LVVAVPEGLP LAVTISLAYS VKKMMKDNNL VRHLDACETM ENSBTAP00000012570/1-1220 VKFFIIGVTV LVVAVPEGLP LAVTISLAYS VKKMMKDNNL VRHLDACETM 501 550 ENSTTRP00000006452/1-1217 GNATAICSDK TGTLTMNRMT VVQAYINEKH YKKIPEPEAI PPNILSYLVT ENSP00000392043/1-1220 GNATAICSDK TGTLTMNRMT VVQAYINEKH YKKVPEPEAI PPNILSYLVT bmy_02210T0/1-1242 GNATAICSDK TGTLTMNRMT VVQAYINEKH YKKIPEPEAI PPNILSYLVT BACU000988/1-1227 GNATAICSDK TGTLTMNRMT VVQAYINEKH YKKIPEPEAI PPNILSYLVT ENSBTAP00000012570/1-1220 GNATAICSDK TGTLTMNRMT VVQAYINEKH YKKIPDPEAI PPNILSYLVT 551 600 ENSTTRP00000006452/1-1217 GLSVNCAYTS KILPPEKEGG LPRHVGNKTE CALLGLLLDL KRDYQDVRNE ENSP00000392043/1-1220 GISVNCAYTS KILPPEKEGG LPRHVGNKTE CALLGLLLDL KRDYQDVRNE bmy_02210T0/1-1242 GISVNCAYTS KILPPEKEGG LPRHVGNKTE CALLGLLLDL KRDYQDVRNE BACU000988/1-1227 GISVNCAYTS KILPPEKEGG LPRHVGNKTE CALLGLLLDL KRDYQDVRNE ENSBTAP00000012570/1-1220 GISVNCAYTS KILPPEKEGG LPRHVGNKTE CALLGFLLDL KRDYQDVRNE 601 650 ENSTTRP00000006452/1-1217 IPEEALYKVY TFNSVRKSMS TVLKNSDGSY RIFSKGASEI ILKKCFKILS ENSP00000392043/1-1220 IPEEALYKVY TFNSVRKSMS TVLKNSDGSY RIFSKGASEI ILKKCFKILS bmy_02210T0/1-1242 IPEEALXKVY TFNSVRKSMS TVLKNSDGSY RIFSKGASEI ILKKCFKILS BACU000988/1-1227 IPEEALYKVY TFNSVRKSMS TVLKNSDGSY RIFSKGASEI ILKKCFKILS ENSBTAP00000012570/1-1220 IPEEALYKVY TFNSVRKSMS TVLKNSDGSY RIFSKGASEI ILKKCFKILS 651 700 ENSTTRP00000006452/1-1217 ANGEAKVFRP RDRDDIVKTV IEPMASEGLR TICLAFRDFP AGEPEPEWDN ENSP00000392043/1-1220 ANGEAKVFRP RDRDDIVKTV IEPMASEGLR TICLAFRDFP AGEPEPEWDN bmy_02210T0/1-1242 ANGEAKVFRP RDRDDIVKTV IEPMASEGLR TICLAFRDFP AGEPEPEWDN BACU000988/1-1227 ANGEAKVFRP RDRDDIVKTV IEPMASEGLR TICLAFRDFP AGEPEPEWDN ENSBTAP00000012570/1-1220 ANGEAKVFRP RDRDDIVKTV IEPMASEGLR TICLAFRDFP AGEPEPEWDN 701 750 ENSTTRP00000006452/1-1217 ENDIVTGLTC IAVVGIEDPV RPEVPDAIKK CQRAGITVRM VTGDNINTAR ENSP00000392043/1-1220 ENDIVTGLTC IAVVGIEDPV RPEVPDAIKK CQRAGITVRM VTGDNINTAR bmy_02210T0/1-1242 ENDIVTGLTC IAVVGIEDPV RPEVPDAIKK CQRAGITVRM VTGDNINTAR BACU000988/1-1227 ENDIVTGLTC IAVVGIEDP- ---VPDAIKK CQRAGITVRM VTGDNINTAR ENSBTAP00000012570/1-1220 ENDIVTGLTC IAVVGIEDPV RPEVPDAIKK CQRAGITVRM VTGDNINTAR 751 800 ENSTTRP00000006452/1-1217 AIATKCGILH PGEDFLCLEG KDFNRRIRNE KGEIEQERID KIWPKLRVLA ENSP00000392043/1-1220 AIATKCGILH PGEDFLCLEG KDFNRRIRNE KGEIEQERID KIWPKLRVLA bmy_02210T0/1-1242 AIATKCGILH PGEDFLCLEG KDFNRRIRNE KGEIEQERID KIWPKLRVLA BACU000988/1-1227 AIATKCGILH PGEDFLCLEG KDFNRRIRNE KGEIEQERID KIWPKLRVLA ENSBTAP00000012570/1-1220 AIATKCGILH PGEDFLCLEG KDFNRRIRNE KGEIEQERID KIWPKLRVLA 801 850 ENSTTRP00000006452/1-1217 RSSPTDKHTL VKGIIDSTVS EQRQVVAVTG DGTNDGPALK KADVGFAMGI ENSP00000392043/1-1220 RSSPTDKHTL VKGIIDSTVS DQRQVVAVTG DGTNDGPALK KADVGFAMGI bmy_02210T0/1-1242 RSSPTDKHTL VKGIIDSTVS EQRQVVAVTG DGTNDGPALK KADVGFAMGI BACU000988/1-1227 RSSPTDKHTL VKGIIDSTVS EQRQVVAVTG DGTNDGPALK KADVGFAMGI ENSBTAP00000012570/1-1220 RSSPTDKHTL VKGIIDSTVS EQRQVVAVTG DGTNDGPALK KADVGFAMGI 851 900 ENSTTRP00000006452/1-1217 AGTDVAKEAS DIILTDDNFT SIVKAVMWGR NVYDSISKFL QFQLTVNVVA ENSP00000392043/1-1220 AGTDVAKEAS DIILTDDNFT SIVKAVMWGR NVYDSISKFL QFQLTVNVVA bmy_02210T0/1-1242 AGTDVAKEAS DIILTDDNFT SIVKAVMWGR NVYDSISKFL QFQLTVNVVA BACU000988/1-1227 AGTDVAKEAS DIILTDDNFT SIVKAVMWGR NVYDSISKFL QFQLTVNVVA ENSBTAP00000012570/1-1220 AGTDVAKEAS DIILTDDNFT SIVKAVMWGR NVYDSISKFL QFQLTVNVVA 901 950 ENSTTRP00000006452/1-1217 VIVAFTGACI TQDSPLKAVQ MLWVNLIMDT LASLALATEP PTESLLLRKP ENSP00000392043/1-1220 VIVAFTGACI TQDSPLKAVQ MLWVNLIMDT LASLALATEP PTESLLLRKP bmy_02210T0/1-1242 VIVAFTGACI TQDSPLKAVQ MLWVNLIMDT LASLALATEP PTESLLLRKP BACU000988/1-1227 VIVAFTGACI TQDSPLKAVQ MLWVNLIMDT LASLALATEP PTESLLLRKP ENSBTAP00000012570/1-1220 VIVAFTGACI TQDSPLKAVQ MLWVNLIMDT LASLALATEP PTESLLLRKP 951 1000 ENSTTRP00000006452/1-1217 YGRNKPLISR TMMKNILGHA FYQLVVVFTL LFAGEKFFDI DSG-NAPLHA ENSP00000392043/1-1220 YGRNKPLISR TMMKNILGHA FYQLVVVFTL LFAGEKFFDI DSGRNAPLHA bmy_02210T0/1-1242 YGRNKPLISR TMMKNILGHA FYQLVVVFTL LFAGEKFFDI DSGRNAPLHA BACU000988/1-1227 YGRNKPLISR TMMKNILGHA FYQLVVVFTL LFAGEKFFDI DSGRNAPLHA ENSBTAP00000012570/1-1220 YGRNKPLISR TMMKNILGHA FYQLVVVFTL LFAGEKFFDI DSGRNAPLHA 1001 1050 ENSTTRP00000006452/1-1217 PPSEHYTIV- -TFVLMQLFN EINARKIHGX XXXXXXXXXX XXXXXXXXXX ENSP00000392043/1-1220 PPSEHYTIVF NTFVLMQLFN EINARKIHGE RNVFEGIFNN AIFCTIVLGT bmy_02210T0/1-1242 PPSEHYTIVF NTFVLMQLFN EINARKIHGE RNVFEGIFNN VIFCTIVLGT BACU000988/1-1227 PPSEHYTIVF NTFVLMQLFN EINARKIHGE RNVFEGIFNN AIFCTIVLGT ENSBTAP00000012570/1-1220 PPSEHYTIVF NTFVLMQLFN EINARKIHGE RNVFEGIFNN AIFCTIVLGT 1051 1100 ENSTTRP00000006452/1-1217 XXXXIIIVQF GGKPFSCSEL SIEQWLWSIF LGMGTLLWGQ LISTIPTSRL ENSP00000392043/1-1220 FVVQIIIVQF GGKPFSCSEL SIEQWLWSIF LGMGTLLWGQ LISTIPTSRL bmy_02210T0/1-1242 FVVQV----- -------AKR RIFFVLRKKA SDGRDLIASL LISTIPTSRL BACU000988/1-1227 FVV------- ---------- ---------- ---------Q LISTIPTSRL ENSBTAP00000012570/1-1220 FVVQIIIVQF GGKPFSCSEL SIEQWLWSIF LGMGTLLWGQ LISTIPTSRL 1101 1150 ENSTTRP00000006452/1-1217 KFLKEAGHGT QKEEIPEEEL AEDVEEIDHA ERELRRGQIL WFRGLNRIQT ENSP00000392043/1-1220 KFLKEAGHGT QKEEIPEEEL AEDVEEIDHA ERELRRGQIL WFRGLNRIQT bmy_02210T0/1-1242 KFLKEAGHGT QKEEIPEEEL AEDVEEIDHA ERELRRGQIL WFRGLNRIQT BACU000988/1-1227 KFLKEAGHGT QKEEIPEEEL AEDVEEIDHA ERELRRGQIL WFRGLNRIQT ENSBTAP00000012570/1-1220 KFLKEAGHGT QKEEIPEEEL AEDVEEIDHA ERELRRGQIL WFRGLNRIQT 1151 1200 ENSTTRP00000006452/1-1217 Q--------- ---------- ---------- ---------I RVVNAFRSSL ENSP00000392043/1-1220 Q--------- ---------- ---------- ---------I RVVNAFRSSL bmy_02210T0/1-1242 Q--------- ---------- ---------- ---------I RVVNAFRSSL BACU000988/1-1227 QMDVVNAFQS GSSIQGALRR QPSIASQHHD VTNISTPTHI RVVNAFRSSL ENSBTAP00000012570/1-1220 Q--------- ---------- ---------- ---------I RVVNAFRSSL 1201 1250 ENSTTRP00000006452/1-1217 YEGLEKPESR SSIHNFMTHP EFRIEDSEPH IPLIDDTDAE DDAPTKRNSS ENSP00000392043/1-1220 YEGLEKPESR SSIHNFMTHP EFRIEDSEPH IPLIDDTDAE DDAPTKRNSS bmy_02210T0/1-1242 YEGLEKPESR SSIHNFMTHP EFRIEDSEPH IPLIDDTDAE DDAPTKRNSS BACU000988/1-1227 YEGLEKPESR SSIHNFMTHP EFRIEDSEPH IPLIDDTDAE DDAPTKRNSS ENSBTAP00000012570/1-1220 YEGLEKPESR SSIHNFMTHP EFRIEDSEPH IPLIDDTDAE DDAPTKRNSS 1251 1300 ENSTTRP00000006452/1-1217 PPPSPNKNNN AVDSGIYLTI EMNKSATSSS PGSPLHSLET SL ENSP00000392043/1-1220 PPPSPNKNNN AVDSGIHLTI EMNKSATSSS PGSPLHSLET SL bmy_02210T0/1-1242 PPPSPNKNNN AVDSGIYLTI EMNKSATSSS PGSPLHSLET SL BACU000988/1-1227 PPPSPNKNNN AVDSGIYLTI EMNKSATSSS PGSPLHSLET SL ENSBTAP00000012570/1-1220 PPPSPNKNNN AVDSGIYLTI EMNKSATSSS PGSPLHSLET SL