KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:22 2014 Check: 00 .. Name: ENSTTRP00000014807/1-320 Len: 377 Check: 1684 Weight: 1.00 Name: bmy_06493T0/1-231 Len: 377 Check: 2388 Weight: 1.00 Name: ENSP00000283027/1-320 Len: 377 Check: 5166 Weight: 1.00 Name: BACU012966/1-320 Len: 377 Check: 4885 Weight: 1.00 Name: ENSBTAP00000012576/1-320 Len: 377 Check: 4712 Weight: 1.00 // 1 50 ENSTTRP00000014807/1-320 ---------- ---------- ---------- ---------- ---------- bmy_06493T0/1-231 TNRKRTARNS HHKVRACAQA SFGDTISRSW RVRLGATRRK YVTAVSGDRV ENSP00000283027/1-320 ---------- ---------- ---------- ---------- ---------- BACU012966/1-320 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012576/1-320 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000014807/1-320 ------MEEV PHDCPGVGSA QAGRGASCQG CPNQGLCASG AGAAPDPXXX bmy_06493T0/1-231 RVQGSGMEEV PHDCPGVSSA QAGRGASCQG CPNQGFCASG AGAAPDP--- ENSP00000283027/1-320 ------MEEV PHDCPGADSA QAGRGASCQG CPNQRLCASG AGATPDTAIE BACU012966/1-320 ------MEEV PHDCPGVSSA QAGRGASCQG CPNQGICASG AGAAPDPAIE ENSBTAP00000012576/1-320 ------MEEV PHDCPGADSA QAGRGASCQG CPNQRLCASA AAAAEETTIE 101 150 ENSTTRP00000014807/1-320 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_06493T0/1-231 ---------- ---------G GVGKSTFSAH LAHGLAEDEN TQVALLDIDI ENSP00000283027/1-320 EIKEKMKTVK HKILVLSGKG GVGKSTFSAH LAHGLAEDEN TQIALLDIDI BACU012966/1-320 EIKERMKTVK HKILVLSGKG GVGKSTFSAH LAHGLAEDEN TQVALLDIDI ENSBTAP00000012576/1-320 EIKEKMKTVK HKILVLSGKG GVGKSTFSAH LAHGLAEDEN TQVALLDIDI 151 200 ENSTTRP00000014807/1-320 XXXXXXXXXX XXXXXVHQSG SGWSPVFLED NLGVMSVGFL LSSPDDAVIW bmy_06493T0/1-231 CGPSIPKIMG LEGEQVHQSG SGWSPVFLED NLGVMSVGFL LSSPDDAVIW ENSP00000283027/1-320 CGPSIPKIMG LEGEQVHQSG SGWSPVYVED NLGVMSVGFL LSSPDDAVIW BACU012966/1-320 CGPSIPKIMG LEGEQVHQSG SGWSPVFLED NLGVMSVGFL LSSPDDAVIW ENSBTAP00000012576/1-320 CGPSIPKIMG LEGEQVHQSG SGWSPVFLED NLGVMSVGFL LSSPDDAVIW 201 250 ENSTTRP00000014807/1-320 RGPKKNXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_06493T0/1-231 RGPKKNGLPL CFLS------ ---------- ---------- ---------- ENSP00000283027/1-320 RGPKKNGMIK QFLRDVDWGE VDYLIVDTPP GTSDEHLSVV RYLATAHIDG BACU012966/1-320 RGPKKNGMIK QFLRDVDWGE VDYLIVDTPP GTSDEHLSAV QYLAAAHIDG ENSBTAP00000012576/1-320 RGPKKNGMIK QFLRDVDWGE VDYLIVDTPP GTSDEHLSVV QYLTAAHIDG 251 300 ENSTTRP00000014807/1-320 XXXXXXXXEV SLQDVRKEIS FCHK-VKLPI IGVVENMSGF ICPKCQKETQ bmy_06493T0/1-231 --LITSFQG- -----QNCIP FCQDGLRLIL LGFVE--CYF YASGC----- ENSP00000283027/1-320 AVIITTPQEV SLQDVRKEIN FCRK-VKLPI IGVVENMSGF ICPKCKKESQ BACU012966/1-320 AVIITTPQEV SLQDVRKEIS FCHK-VKLPI IGVVENMSSF TCPKCQKESQ ENSBTAP00000012576/1-320 AVIITTPQEV SLQDVRKEIS FCHK-VKLPI IGVVENMSGF ICPKCQKESQ 301 350 ENSTTRP00000014807/1-320 IFPPTTGGAE VMCHDLKIPL LGKVPLDPRI GKSCDKGQSF LVEAPDSPAT bmy_06493T0/1-231 ---------- ---------- ---------- ---------- ---------- ENSP00000283027/1-320 IFPPTTGGAE LMCQDLEVPL LGRVPLDPLI GKNCDKGQSF FIDAPDSPAT BACU012966/1-320 IFPPTTGGAE VMCQDLKVPL LGKVPLDPRI GKSCDKGESF FAEVPDSPAT ENSBTAP00000012576/1-320 IFPPTTGGAE AMCQDLKIPL LGKVPLDPRI GKSCDKGQSF LVEAPDSPAT 351 400 ENSTTRP00000014807/1-320 LAYRSIIQRI QEFCSLRQPK GENLVGS bmy_06493T0/1-231 ---------- ---------- ---LFTG ENSP00000283027/1-320 LAYRSIIQRI QEFCNLHQSK EENLISS BACU012966/1-320 LAYRSIIQRI QESCSLRQPK GENLVGS ENSBTAP00000012576/1-320 VAYRSIIQRI QEFCSQRLPE GENLVGS