KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:23 2014 Check: 00 .. Name: ENSBTAP00000012592/1-486 Len: 535 Check: 4483 Weight: 1.00 Name: bmy_04121T0/1-508 Len: 535 Check: 2456 Weight: 1.00 Name: ENSP00000434442/1-521 Len: 535 Check: 1751 Weight: 1.00 Name: BACU008954/1-520 Len: 535 Check: 2781 Weight: 1.00 Name: ENSTTRP00000013410/1-520 Len: 535 Check: 3213 Weight: 1.00 // 1 50 ENSBTAP00000012592/1-486 MAAEPNKTEI QTFFKRLRAI PTNKACFDCG AKNPSWASIT YGVFLCIDCS bmy_04121T0/1-508 MAAEPSKTEI QTLFKRLRAI PTNKACFDCG AKNPSWASIT YGVFLCIDCS ENSP00000434442/1-521 MAAEPNKTEI QTLFKRLRAV PTNKACFDCG AKNPSWASIT YGVFLCIDCS BACU008954/1-520 MAAEPSKTEI QTLFKRLRAI PTNKACFDCG AKNPSWASIT YGVFLCIDCS ENSTTRP00000013410/1-520 MAAEPSKTEI QTLFKRLRAI PTNKACFDCG AKNPSWASIT YGVFLCIDCS 51 100 ENSBTAP00000012592/1-486 GVHRSLGVHL SFIRSTELDS TWSWFQLRCM QVGGNANATA FFRQHGCTAN bmy_04121T0/1-508 GVHRSLGVHL SFIRSTELDS NWNWFQLRCM QVGGNANATA FFRQHGCIAS ENSP00000434442/1-521 GVHRSLGVHL SFIRSTELDS NWNWFQLRCM QVGGNANATA FFRQHGCTAN BACU008954/1-520 GVHRSLGVHL SFIRSTELDS NWNWFQLRCM QVGGNANATA FFRQHGCIAS ENSTTRP00000013410/1-520 GVHRSLGVHL SFIRSTELDS NWNWFQLRCM QVGGNANATA FFRQHGCTAS 101 150 ENSBTAP00000012592/1-486 DANTKYNSRA AQMYREKIRQ LGSAALARHG TDLWTDSVST A-PSHSPEKK bmy_04121T0/1-508 DANTKYNSRA AQMYREKIRQ LGSAALARHG TDLWIDNMSS A-PSHSPEKK ENSP00000434442/1-521 DANTKYNSRA AQMYREKIRQ LGSAALARHG TDLWIDNMSS AVPNHSPEKK BACU008954/1-520 DANTKYNSRA AQMYREKIRQ LGSAALARHG TDLWIDNISS A-PSHSPEKK ENSTTRP00000013410/1-520 DANTKYNSRA AQMYREKIRQ LGSAALARHG TDLWIDNMSS A-LSHSPEKK 151 200 ENSBTAP00000012592/1-486 ESDFFLEHTQ PPAWNAPVTD LSETQQPAPS AESSGLAQPE HGPNMDLLGT bmy_04121T0/1-508 DSDFFSEHTQ PPAWNAPATD PSETQQPTPS AESSGLAQPE HGPNMELLGT ENSP00000434442/1-521 DSDFFTEHTQ PPAWDAPATE PSGTQQPAPS TESSGLAQPE HGPNTDLLGT BACU008954/1-520 DSDFFSEHTQ PPAWNAPATD PSETQQPTPS AESSGLAQPE HGPNMELLGT ENSTTRP00000013410/1-520 DSDFFSEHTQ PPAWNAPATD PSETQQPPPS AESSGLAQPE HGPNMELLGT 201 250 ENSBTAP00000012592/1-486 SPKASLEPKT SLIGKKKPAA AKKGLGAKKG LGAQKVSSQS FSEIERQAQV bmy_04121T0/1-508 SPKASLGQYA SW----QLWG AWERLGAKKG LGAQKVSSQS FSEIERQAQV ENSP00000434442/1-521 SPKASLELKS SIIGKKKPAA AKKGLGAKKG LGAQKVSSQS FSEIERQAQV BACU008954/1-520 SPKASLELKT SLIGKKKPAA AKKGLGAKKG LGAQKVSSQS FSEIERQAQV ENSTTRP00000013410/1-520 SPKASLELKT SLIGKKKPAA AKKGLGAKKG LGAQKVSSQS FSEIERQAQV 251 300 ENSBTAP00000012592/1-486 AEKLREQQVA DAKKQAEESM VASMRLAYQE LQIDRKKEEK KLQNLEGKKR bmy_04121T0/1-508 AEKLREQQAA DAKKQAEESM VASMRLAYQE LQIDRKKEEK KLQNLEGKKR ENSP00000434442/1-521 AEKLREQQAA DAKKQAEESM VASMRLAYQE LQIDRKKEEK KLQNLEGKKR BACU008954/1-520 AEKLREQQAA DAKQQAEESV VASMRLAYQE LQIDRKKEEK KLQNLEGKKR ENSTTRP00000013410/1-520 AEKLREQQVA DAKKQAEESM VASMRLAYQE LQIDRKKEEK KLQNLEGKKR 301 350 ENSBTAP00000012592/1-486 EQAERLGMGL VSRSSVSHSV LSEMQVIEQE TPVSAKSSRS QLDLFDDVGT bmy_04121T0/1-508 EQAERLGMGL VSRSSVSHSV LSEMQVIEQE TPVSAKSSRS QLDLFDDVGT ENSP00000434442/1-521 EQAERLGMGL VSRSSVSHSV LSEMQVIEQE TPVSAKSSRS QLDLFDDVGT BACU008954/1-520 EQAERLGMGL VSRSSVSHSV LSEMQVIEQE TPVSAKSSRS QLDLFDDVGT ENSTTRP00000013410/1-520 EQAERLGMGL VSRSSVSHSV LSEMQVIEQE TPVSAKSSRS QLDLFDDVGT 351 400 ENSBTAP00000012592/1-486 FASGPPKYKD NPFSLGESFG SRWDTDTAWE SPTGGKWRAG ARAWSRVKHV bmy_04121T0/1-508 FASGPPKYKD NPFSLGESFG SRWDTDAAW- ---------- --AMGRVRAV ENSP00000434442/1-521 FASGPPKYKD NPFSLGESFG SRWDTDAAW- ---------- --GMDRVEEK BACU008954/1-520 FASGPPKYKD NPFSLGESFG SRWDTDAAW- ---------- --GMDRMEEK ENSTTRP00000013410/1-520 FASGPPKYKD NPFSLGESFG SRWDTDAAW- ---------- --GMDGMEEK 401 450 ENSBTAP00000012592/1-486 RN---LQELK PSPPTCSSGG RWILSMKPGP GSSSSRAAAP SARQTSSGTW bmy_04121T0/1-508 VP-------R P-PLRVTNR- REVESRSSGL ESSEAQQKFA GAKAISSDMF ENSP00000434442/1-521 EPEVTISSIR PISERATNR- REVESRSSGL ESSEARQKFA GAKAISSDMF BACU008954/1-520 EPEVTVSSIR PISDRVTNR- REVESRSSGL ESSEARQKFA GAKAISSDMF ENSTTRP00000013410/1-520 EPEVTVSSVR PISERVTNR- REVESRSSGL ESSEARQKFA GAKAISSDMF 451 500 ENSBTAP00000012592/1-486 MELMEQAACP WGMCCPRLTS PSLSRASSLW ---------- ---------- bmy_04121T0/1-508 FGREVDTEHE ARSRLQRLSG SSAISSSDLF GDMDGAHGAG SVSLGNVLPT ENSP00000434442/1-521 FGREVDAEYE ARSRLQQLSG SSAISSSDLF GDMDGAHGAG SVSLGNVLPT BACU008954/1-520 FGREVDTEHE ARSRLQRLSG SSAISSSDLF GDMDGAHGAG SVSLGNVLPT ENSTTRP00000013410/1-520 FGREVDTEHE ARSRLQRLSG SSAISSSDLF GDMDGAHGAG SVSLGNVLPT 501 550 ENSBTAP00000012592/1-486 ---------- ---PGRWPCW PMA------- ----- bmy_04121T0/1-508 ADIAQFKQGV KSVAGKMAVL ANGVMNSLQD RYGSY ENSP00000434442/1-521 ADIAQFKQGV KSVAGKMAVL ANGVMNSLQD RYGSY BACU008954/1-520 ADIAQFKQGV RSVAGKMAVL ANGVMNSLQD RYGSY ENSTTRP00000013410/1-520 ADIAQFKQGV KSVAGKMAVL ANGVMNSLQD RYGSY