KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:24 2014 Check: 00 .. Name: ENSP00000252992/1-762 Len: 1614 Check: 2405 Weight: 1.00 Name: ENSBTAP00000012597/1-766 Len: 1614 Check: 9006 Weight: 1.00 Name: BACU007573/1-1611 Len: 1614 Check: 599 Weight: 1.00 Name: bmy_02023T0/1-690 Len: 1614 Check: 4269 Weight: 1.00 Name: ENSTTRP00000000584/1-761 Len: 1614 Check: 7680 Weight: 1.00 // 1 50 ENSP00000252992/1-762 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012597/1-766 ---------- ---------- ---------- ---------- ---------- BACU007573/1-1611 MADNQRTWWQ HWPDTTYIKP LNHMVGGTCL AALPKLGILG RDEALEDHTG bmy_02023T0/1-690 ---------- ---------- ---------- ----PLGELR CRTAVRRRRG ENSTTRP00000000584/1-761 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000252992/1-762 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012597/1-766 ---------- ---------- ---------- ---------- ---------- BACU007573/1-1611 SGGAVAALMG RAAHKPYLRP EEQVLINRRD ITSSKDAWDM QEFIIRMYVK bmy_02023T0/1-690 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000584/1-761 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000252992/1-762 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012597/1-766 ---------- ---------- ---------- ---------- ---------- BACU007573/1-1611 ELLRHPAFQL LLAVLLVVNA ITIALRTNSV LGQKHYELFS TIDDIVLTIL bmy_02023T0/1-690 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000584/1-761 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000252992/1-762 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012597/1-766 ---------- ---------- ---------- ---------- ---------- BACU007573/1-1611 ICELLLGWLN GFWIFWKDGW NILNFLIIFI LLLGFFVNEL SAISITYTLR bmy_02023T0/1-690 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000584/1-761 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000252992/1-762 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012597/1-766 ---------- ---------- ---------- ---------- ---------- BACU007573/1-1611 ALRLVHVCMS VEPLARIIRV ILQSVPDMAN IVALILFFML VFSVFGVTLF bmy_02023T0/1-690 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000584/1-761 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000252992/1-762 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012597/1-766 ---------- ---------- ---------- ---------- ---------- BACU007573/1-1611 GAFVPMHFQN MQVALYTLFI CITQDGWVDI YGDFQMETRE YAVEIGGAIY bmy_02023T0/1-690 ---------- ---------- ---RSGWCPR VEDFGARFQA HLAQI----- ENSTTRP00000000584/1-761 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000252992/1-762 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012597/1-766 ---------- ---------- ---------- ---------- ---------- BACU007573/1-1611 FAIFITVGAF IGINLLVVVV TTNLEQMMKA GEQGQQRQIA FSETGNEEGN bmy_02023T0/1-690 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000584/1-761 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000252992/1-762 ---------- ---------- ---------- ---------- -----MAMQE ENSBTAP00000012597/1-766 ---------- ---------- ---------- ---------- -----VAMQD BACU007573/1-1611 GNNELPLVHC VVARLETSGV PQEPFMGGLP TNLSEDTFDN FCLVLEAIQE bmy_02023T0/1-690 ---------- ---------- ---------- ---------- --TVLMAMQE ENSTTRP00000000584/1-761 ---------- ---------- ---------- ---------- -----MAMQE 401 450 ENSP00000252992/1-762 K--------- ---------- ---------- ---------- ---------- ENSBTAP00000012597/1-766 K--------- ---------- ---------- ---------- ---------- BACU007573/1-1611 NLTQYKEIRD ELNTIVDEVR SIRFNQEQEE ELMQRHLSWS LSRASGSSTA bmy_02023T0/1-690 K--------- ---------- ---------- ---------- ---------- ENSTTRP00000000584/1-761 K--------- ---------- ---------- ---------- ---------- 451 500 ENSP00000252992/1-762 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012597/1-766 ---------- ---------- ---------- ---------- ---------- BACU007573/1-1611 IREMTCQQDL ITALVNREKN NSPTMSTLSR RHHNTITQAP SHPVESAPSA bmy_02023T0/1-690 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000584/1-761 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000252992/1-762 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012597/1-766 ---------- ---------- ---------- ---------- ---------- BACU007573/1-1611 GTAMAQSPET TAAHSTTLIH SSSGMTKSAA STEASQASPK HTKNSSPGAG bmy_02023T0/1-690 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000584/1-761 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000252992/1-762 ------YPTE G--------- ISHV------ ---------- ---------- ENSBTAP00000012597/1-766 ------YPSE R--------- ISHA------ ---------- ---------- BACU007573/1-1611 VCASDEYPAD RRVCMCNNSY YAHSELSRVL VALRCQPQEI EVVLSSCFLK bmy_02023T0/1-690 ------YPSE R--------- ISHA------ ---------- ---------- ENSTTRP00000000584/1-761 ------YPSE R--------- FSHA------ ---------- ---------- 601 650 ENSP00000252992/1-762 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012597/1-766 ---------- ---------- ---------- ---------- ---------- BACU007573/1-1611 TRHWILEEGA FSGCSRVSKT EEGLSVQVFT MEKKEGTCGL RLSTNNSHAL bmy_02023T0/1-690 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000584/1-761 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000252992/1-762 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012597/1-766 ---------- ---------- ---------- ---------- ---------- BACU007573/1-1611 YSLEAQLLQV HPDYTNTGST MLNFSCMYPL VVNVSQTHPY PVVFFPYITI bmy_02023T0/1-690 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000584/1-761 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000252992/1-762 ---------- ---------- TSP------- ---------- ---------- ENSBTAP00000012597/1-766 ---------- ---------- TSP------- ---------- ---------- BACU007573/1-1611 HILGTGDTIV ILGIFTDRQL SSPLENRPVP LGKPLYVVLR ATSSDPDRFA bmy_02023T0/1-690 ---------- ---------- TSP------- ---------- ---------- ENSTTRP00000000584/1-761 ---------- ---------- TSP------- ---------- ---------- 751 800 ENSP00000252992/1-762 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012597/1-766 ---------- ---------- ---------- ---------- ---------- BACU007573/1-1611 LVASEVFTST NISRTGAVKA TYYFVKERQW EKLPSQQQLL GGLRANRASL bmy_02023T0/1-690 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000584/1-761 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000252992/1-762 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012597/1-766 ---------- ---------- ---------- ---------- ---------- BACU007573/1-1611 EVTLAFNLFR FSTSDTLYLQ SRVTLCDKRA GRRRVSRYLE FYCTLADGFV bmy_02023T0/1-690 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000584/1-761 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000252992/1-762 ---------- -SSDVIQKGS SLGTEWQTPV ISEPFRSRFS RCSSVADSGD ENSBTAP00000012597/1-766 ---------- -GSSVIQKGS SLGTEWQTPV ISEAFRSRFS RCSSLADSGD BACU007573/1-1611 PPFKQFQSDF SSSNVIQRGG SLGTEWQTPV ISEAFRSRFS RCSSIADSGD bmy_02023T0/1-690 ---------- -GSNVIQRGG SLGTEWQTPV ISEAFRSRFS RCSSIADSGD ENSTTRP00000000584/1-761 ---------- -GSNVIQRGG SLGTEWQTPV ISEAFRSRFS RCSSIADSGD 901 950 ENSP00000252992/1-762 TAIGTSCSDI AEDFCSSSGS PPFQPIKSHV TIPTAHVMPS TLGTSPAKPN ENSBTAP00000012597/1-766 TAIGTSCSDI AEDFCSSSSS PSFQPIKSHV TIPTAHVIPS TLGTSPSKPN BACU007573/1-1611 TAIGTSCSDI AEDFCSSSSS PSFQPIKSHV TIPTAHVMPS TLGTYPAKAN bmy_02023T0/1-690 TAIGTSCSDI AEDFCSSSSS PSFQPIKSHV TIPTAHVMPS TLGTYPAKAN ENSTTRP00000000584/1-761 TAIGTSCSDI AEDFCSSSSS PSFQPIKSHV TIPTAHVMPS TLGTSPAKPN 951 1000 ENSP00000252992/1-762 STPVGPSSSK LPLSGLAESV GMTRNGDLGA MKHSPGLSRD LMYFSGATGE ENSBTAP00000012597/1-766 S-AAG-SSTK LPLSGLAESV GMTRNGDLSS MKRSPGLSRD FMYLCGAAGE BACU007573/1-1611 S-PAGPSSSK LPLSGLTESV GMTRNGDLGA MKRSPDLSRD FMYLCGAAGE bmy_02023T0/1-690 S-PAGPSSSK LPLSGLTESV GMTRNGDLGA MKRSPGLSRD FMYLCGAAGE ENSTTRP00000000584/1-761 S-PAGPSSSK LPLSGLTESV GMTRNGDLGA MKRSPGLSRD FMYLCGAPGE 1001 1050 ENSP00000252992/1-762 NGIEQSWFPA VGHERQEEAR KFDIPSMEST LNQSAMMETL YSDPHHRVRF ENSBTAP00000012597/1-766 NGVEQSWFPA VGHEREEEAR KFDVPNMEST LNQSAMLETL YSDPHYRVYF BACU007573/1-1611 NGVEQSWFPA VGHEREEEAR KFDIPNMEST LNQSAMMETL YSDPHYRVFF bmy_02023T0/1-690 NGVEQSWFPA VGHEREEEAR KFDIPNMEST LNQSAMMETL YSDPHYRVFF ENSTTRP00000000584/1-761 NGVEQSWFPA VGHEREEEAR KFDIPNMEST LNQSAVMETL YSDPHYRASF 1051 1100 ENSP00000252992/1-762 HNPRTSTSKE LYRVLPEAKK APGSGAVFER NGPHSNSSGV LPLGLQPAPG ENSBTAP00000012597/1-766 HNPRTDTNKE LYKGLPETKK APGSGAVCER NGPHPGSSGV LPLGLQPAPG BACU007573/1-1611 HNPRTDTNKE LYKVLPETKK APGSGAVCER NGPHPSGSGV LPLGLQPAPG bmy_02023T0/1-690 HNPRTDTNKE LYKVLPETKK APGSGAVCER NGPHPSGSGV LPLGLQPAPG ENSTTRP00000000584/1-761 HNPRTDTNKE LYRVLPETKK APGSGAVCER NGPHPSGSGV LPLGLQPAPG 1101 1150 ENSP00000252992/1-762 LSKPLPSQVW QPSPDTWHPR EQSCELSTCR QQLELIRLQM EQMQLQNGAI ENSBTAP00000012597/1-766 LSKPLPSQVW QPNPDPWHSR ERSCELSTCR QQLELIRLQM EQMQLQNGAV BACU007573/1-1611 LSKPLPSQVW QLNPDPWHPR ERSCELSTCQ QQLDLIRLQM EQMQLQNGAI bmy_02023T0/1-690 LSKPLPSQVW QLNPDPWHPR ERSCELSTCQ QQLDLIRLQM EQMQLQNGAI ENSTTRP00000000584/1-761 LSKPLPSQVW QLNPDPWHPR ERSCELSTCQ QQLDLIRLQM EQMQLQNGAI 1151 1200 ENSP00000252992/1-762 CHHPAAFGPS LPILEPAQWI SILNSNEHLL KEKELLIDKQ RKHISQLEQK ENSBTAP00000012597/1-766 CHHPAGFSPS LPTLDPAQWM SILNSNEHLL KEKELLIDKQ RKHISQLEQK BACU007573/1-1611 CHHPAAFSPS LPTLDPAQWI SILNSNENLL KEKELLIDKQ RKHISQLEQK bmy_02023T0/1-690 CHHPAAFSPS LPTLDPAQWI SILNSNENLL KEKELLIDKV R--------- ENSTTRP00000000584/1-761 CHHPAAFSPS LPTLDPAQWI SILNSNENLL KEKELLIDKQ RKHISQLEQK 1201 1250 ENSP00000252992/1-762 VRESELQVHS ALLGRPAPFG DVCLLR--LQ ELQRENTFLR AQFAQKTEAL ENSBTAP00000012597/1-766 VRESELQVHS ALLGRPAPFG DVCLLR--LQ ELQRENTFLR AQFAQKTEAL BACU007573/1-1611 VRESELQVHG ALLGRPAPFG DVCLLR--LQ ELQRENTFLR AQFAQKTDAL bmy_02023T0/1-690 ---------- ---------- NSYILRIFLQ ELQRENTFLR AQFAQKTEAL ENSTTRP00000000584/1-761 VRESELQVHS ALLGRPAPFG DVCLLR--LQ ELQRENTFLR AQFAQKTEAL 1251 1300 ENSP00000252992/1-762 SREKIDLEKK LSASEVEVQL IRESLKVALQ KHSEEVKKQE ERVKGRDKHI ENSBTAP00000012597/1-766 SKEKIELEKK LSASEVEVQL IRESLRVALQ KHSEEGKKQE ERVKGRDKHI BACU007573/1-1611 SKEKMELEKK LSASEVEVQL IRESLKVALQ KHSEEGKKQE ERVKGRDKHI bmy_02023T0/1-690 SKEKMELEKK LSASEVEVQL IRESLKVALQ KHSEEGKKQE ERVKGRDKHI ENSTTRP00000000584/1-761 SKEKMELEKK LSASEVEVQL IRESLKVALQ KHSEEGKKQE ERVKGRDKHI 1301 1350 ENSP00000252992/1-762 NNLKKKCQKE SEQNREKQQR IETLERYLAD LPTLEDHQKQ SQQLKDSELK ENSBTAP00000012597/1-766 NNLKKKCQKE SEQNREKQQR IETLERYLAD LPTLEDHQKQ SQQLKDSELK BACU007573/1-1611 NNLKKKCQKE SEQNREKQQR IETLERYLAD LPTLEDHQKQ SQQLKDSELK bmy_02023T0/1-690 NNLKKKCQKE SEQNREKQQR IETLERYLAD LPTLEDHQKQ SQQ------- ENSTTRP00000000584/1-761 NNLKKKCQKE SEQNREKQQR IETLERYLAD LPTLEDHQKQ SQQLKDSELK 1351 1400 ENSP00000252992/1-762 STELQEKVTE LESLLEETQA ICREKEIQLE SLRQREAEFS SAGHSLQDKQ ENSBTAP00000012597/1-766 STELQERVTE LESLLEETQA ACREKEVQLE SLRQREADFS STQHSLQDEQ BACU007573/1-1611 STELQERVTE LESLLEETQA ACREKEVQLE SLRQREAEFS STRHSLQDKQ bmy_02023T0/1-690 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000584/1-761 STELQERVTE LESLLEETQA ACREKEVQLE SLRQREAEFS STRHSLQDKQ 1401 1450 ENSP00000252992/1-762 SVEETSGEGP -------EVE MESWQKRYDS LQKIVEKQQQ KMDQLRSQVQ ENSBTAP00000012597/1-766 CVEDASGDGP AQQGRGPQVE MESWQKECDS LRKIVERQQQ KIDQLHSQVQ BACU007573/1-1611 CVEAASGEDT AQRGEGPQVE MESWQKECDS LRKIVEKQQQ KIDQLRSQVQ bmy_02023T0/1-690 ---------- ---------- ---------- ---IVEKQQQ KIDQLRS--Q ENSTTRP00000000584/1-761 CVEVASGEDT -------EVE MESWQKECDS LRKIVEKQQQ KIDQLRSQVQ 1451 1500 ENSP00000252992/1-762 SLEQEVAQEE GTSQALREEA QRRDSALQQL RTAVKELSVQ NQDLIEKNLT ENSBTAP00000012597/1-766 SLEQEVAQEE GTSQALKEEA QRRETALQQL RTAVKELSVQ NQDLIEKNLT BACU007573/1-1611 SLEQEVAQEE GTSQALKEEA QRRETALQQL RTAVKELSVQ NQDLIEKNLT bmy_02023T0/1-690 SLEQEVAQEE GTSQALKEEA QRRETALQQL RTAVKELSVQ NQDLIEKNLT ENSTTRP00000000584/1-761 SLEQEVAQEE GTSQALKEEA QRRETALQQL RTAVKELSVQ NQDLIEKNLT 1501 1550 ENSP00000252992/1-762 LQEHLRQAQP GSPPSPDTAQ LALELHQELA SCLQDLQAVC SIVTQRAQGH ENSBTAP00000012597/1-766 LQEHLRQAQS GSPSSSDTAQ LAFELHQELA SCLQDLQAVC SIVTQRAQGH BACU007573/1-1611 LQEHLRQAQS GSPSSSDTAQ LAFELHQELA SCLQDLQAVC SIVTQRAQGH bmy_02023T0/1-690 LQEHLRQAQS GSPSSSDTAQ LAFELHQELA SCLQDLQAVC SIVTQRAQGH ENSTTRP00000000584/1-761 LQEHLRQAQS GSPSSSDTAQ LAFELHQELA RCLQDLQAVC SIVTQRAQGH 1551 1600 ENSP00000252992/1-762 DPNLSLLLGI HSAQHPETQL DLQKPDVIKR KLEEVQQLRR DIEDLRTTMS ENSBTAP00000012597/1-766 DPNLSLLLGI HSV-HPGTQL DFQKPDVIRR KLEEVQQLRR DIEDLRTTMS BACU007573/1-1611 DPNLSLLLGI HSTQHAGTQL DFQKPDVIRR KLEEVQQLRR DIEDLRTTMS bmy_02023T0/1-690 DPNLSLLLGI HSTQHAGTQL DFQKPDVIRR KLEEVQQLRR DIEDLRTTMS ENSTTRP00000000584/1-761 DPSLSLLLGI HSTQHAGTQL DFQKPDVIRR KLEEVQQLRR DIEDLRTTMS 1601 1650 ENSP00000252992/1-762 DRYAQDMGEN CVTQ ENSBTAP00000012597/1-766 DRYAQDMGEN CVTQ BACU007573/1-1611 DRYAQDMGEN CVTQ bmy_02023T0/1-690 DRYAQDMGEN CVTQ ENSTTRP00000000584/1-761 DRYAQDMGEN CVTQ