KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:25 2014 Check: 00 .. Name: ENSP00000363339/1-520 Len: 527 Check: 9549 Weight: 1.00 Name: BACU007571/1-435 Len: 527 Check: 4013 Weight: 1.00 Name: ENSBTAP00000012602/1-508 Len: 527 Check: 4940 Weight: 1.00 Name: bmy_02021T0/1-472 Len: 527 Check: 6489 Weight: 1.00 Name: ENSTTRP00000000587/1-472 Len: 527 Check: 9665 Weight: 1.00 // 1 50 ENSP00000363339/1-520 MSSPLASLSK TRKVPLPSEP MNPGR-RGIR IYG----DED EVDMLSDGCG BACU007571/1-435 --MLLPCLLQ AQTFASQP-P FSPQRGAGIG HPGPPREPED EVDVLKDAHG ENSBTAP00000012602/1-508 MSSPLASLGK TRRVPLQSEP VNPGR-RGIK IYG----NED EVDMLNGAHG bmy_02021T0/1-472 -MRSVRVLVA WETVSQQDGG AAGGS-AALR --------ED EADVLNDAHG ENSTTRP00000000587/1-472 -MSSLASLGK TRRVPLHSEP VNPGR-RDIK MYG----NED EVDVLNDAHG 51 100 ENSP00000363339/1-520 SEEKISVPSC YGGIGAP--V SRQVPASHDS ELMAFMTRKL WDLEQQVKAQ BACU007571/1-435 SEERISVPSC YGGIGAP--V SRQVPVYHDS ELMAAMARKV RDLERQVKAQ ENSBTAP00000012602/1-508 SEERISVPSC YGGIGAP--V SRQVPVYNDS ELVATLTRKL RDLERQVKAQ bmy_02021T0/1-472 SEERISVPSC YGGIGAPDFV XLAVPVYHDS ELMAAMARKV RDLERQVKAQ ENSTTRP00000000587/1-472 SEERISVPSC YGGIGAP--V SRHVPVYHDS ELMATMARKV QDLERQVKAQ 101 150 ENSP00000363339/1-520 TDEILSKDQK IAALEDLVQT LRPHPAEATL QRQEELETMC VQLQRQVREM BACU007571/1-435 ADEMLSKDGK IRALEELVET LQEHQGTVTL QRQEELETMC AQLQRQVGEM ENSBTAP00000012602/1-508 TDEILSKTRK IQALEEMVET LEKHQGKVSL QRQEELETVC AKLQRQVGEM bmy_02021T0/1-472 ADEMLSKDRK IRALEELVET LQEHQGTVTL QRQEELETMC AQLQQQVGEM ENSTTRP00000000587/1-472 ADEMLSKDQK IRALEELVET LQEHQGTVTL QRQEELETTC AQLQRQVGEM 151 200 ENSP00000363339/1-520 ERFLSDYGLQ WVGEPMDQED SESKTVSEHG ERDWMTAKKF WKPGDSLAPP BACU007571/1-435 ERFLGDYGLQ WVGEPMDEED LED------G ERDWMTAKKF WKPGDSLVPP ENSBTAP00000012602/1-508 ERFLGDYGLQ WVGEPMDQED SED------G ERDWMTAKKF WKPGDSLVPP bmy_02021T0/1-472 ERFLGDYGLQ WVGEPMGEED SED------G ERDWMTAKKF WKPGDSLVPP ENSTTRP00000000587/1-472 ERFLGDYGLQ WVGEPMHEED SED------G ERDWMTAKKF WKPGDSLVPP 201 250 ENSP00000363339/1-520 EVDFDRLLAS LQDLSELVVE GDTQVTPVPG GARLRTLEPI PLKLYRNGIM BACU007571/1-435 QVDFDRLLAS LKDLSELAVD SDTQLTPVPS RVPHCVLEPI PLKLYRNGIV ENSBTAP00000012602/1-508 EVDFDRLLAS LKDLSELVED SDTQVMPVPD RVPHQTLEPI PLRLYRNGIV bmy_02021T0/1-472 QVDFDRLLAS LKDLSELAVD SDTQLAPMPS RVPHCVLEPI PLKLYRNGIV ENSTTRP00000000587/1-472 EVDFDRLLAS LKDLSELAVD SDTQLTPMPS RVPHCVLEPI PLKLYRNGIV 251 300 ENSP00000363339/1-520 MFDGPFQPFY DPSTQRCLRD ILDGFFPSEL QRLYPNGVPF KVSDLRNQVY BACU007571/1-435 MFDGPFRPFH DPSTQRCLRD ILDGFFPSEL QRLYPDGVPF KVSDLRNQVY ENSBTAP00000012602/1-508 MFDGPFRPFH DPSTQRCLRD ILDGFFPSEL QRLYPDGVPF KVSDLRSQVY bmy_02021T0/1-472 MFDGPFRPFH DPSTQRCLRD ILDGFFPSEL QRLYPDGVPF KVSDLRNQVY ENSTTRP00000000587/1-472 MFDGPFRPFH DPSTQRCLRD ILDGFFPSEL QRLYPDGVPF KVSDLRNQVY 301 350 ENSP00000363339/1-520 LEDGLDPFPG EGRVVGRQLM HKALDRVEEH PGSRMTAEKF LNRLPKFVIR BACU007571/1-435 PENGLDAFPG ESRVVGWQRI RKPLDRM-EH PGSTMTAEKF LNRLPKFVIR ENSBTAP00000012602/1-508 PEHGLDPFPG EGRVVGLQRI RKPLDSI-EH SGSRMTAEKF LNRLPKFVIR bmy_02021T0/1-472 PENGLEAFPG EGRVVGWQRI RKPLDRM-EH PGSRMTAEKF LNRLPKFVIR ENSTTRP00000000587/1-472 PENGLDPFPG EGRVVGWQRI RKPLDRM-EH PGSRMTAEKF LNRLPKLVIR 351 400 ENSP00000363339/1-520 QGEVIDIRGP IRDTLQNCCP LPARIQEIVV ETPTLAAERE RSQESPNTPA BACU007571/1-435 QGEVIDIRGP IRDTLKNCCP LRVRIQEIVV ETPALTAERE RSQESPELPA ENSBTAP00000012602/1-508 QGEVIDIRGP IRDTLQNCCP LPVRIQEIVV ETPALAAERV RSRESPESPA bmy_02021T0/1-472 QGEVIDIRGP IRDTLKNCCS LRVRIQEIVV ETPALAAERE RSQESPELPA ENSTTRP00000000587/1-472 QGEVIDIRGP IRDTLK--CP LCVQIQEIVV ETPALAAERE RSQESPESPV 401 450 ENSP00000363339/1-520 PPLSMLRIKS ENGEQAFLLM MQPDNTIGDV RALLAQARVM DASAFEIFST BACU007571/1-435 PALSTLRIKS ENGQPS---- ---------- ---------- ---------- ENSBTAP00000012602/1-508 PLLSMLRIKS ENGEQAFLLM MRPEDRVGDV RALLAQARAV EPSTFEIFST bmy_02021T0/1-472 PTLSTLRIKS ENGEQAFLLM MRPEDTVGDV RTLLAQARAV EATTFEIFST ENSTTRP00000000587/1-472 PALSTLRIKS ENGEQAFLLL MRPEDTVGDV RTLLAQARAV EATTFEIFST 451 500 ENSP00000363339/1-520 FPPTLYQDDT LTLQAAGLVP KAALLLRARR APKSSLKFSP GPCPGPGPGP BACU007571/1-435 ---------S ISSAEEGAAP SRPSVTR--- ---------- ---------- ENSBTAP00000012602/1-508 FPPTVYNDDA LTLQAAGLVP NATLLLRVRR ASPPGSSFGP EGLAAPGEGG bmy_02021T0/1-472 FPPTVYHNDA LTLQAAGLVP NATLLLRVRR AP-------- ---------- ENSTTRP00000000587/1-472 FPPTVYHNDA LTLQAAGLVP NATLLLRARR AP-------- ---------- 501 550 ENSP00000363339/1-520 SPGPGPGPSP GPGPGPSPCP GPSPSPQ BACU007571/1-435 ------APAG GPG------- -RWVFVL ENSBTAP00000012602/1-508 PGPRPSPAAP GPA-----CS QRIPAPR bmy_02021T0/1-472 ------PPAP SPE------- ------- ENSTTRP00000000587/1-472 ------LPAP GPE------- -------