KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:27 2014 Check: 00 .. Name: ENSTTRP00000015266/1-523 Len: 538 Check: 8846 Weight: 1.00 Name: ENSP00000303706/1-524 Len: 538 Check: 7705 Weight: 1.00 Name: ENSBTAP00000012611/1-525 Len: 538 Check: 5372 Weight: 1.00 Name: bmy_05604T0/1-495 Len: 538 Check: 5690 Weight: 1.00 Name: BACU002427/1-535 Len: 538 Check: 3087 Weight: 1.00 // 1 50 ENSTTRP00000015266/1-523 MELGPEPPHR RRLLFACSPP PAPQPVVKAL FSTPAAGGLS PVTSLTVTMD ENSP00000303706/1-524 MELGPEPPHR RRLLFACSPP PASQPVVKAL FGASAAGGLS PVTNLTVTMD ENSBTAP00000012611/1-525 MELGPEPPHR RRLLFACSPP PAPQPVVKAL FGTPAAGGLS PVTNLTVTMD bmy_05604T0/1-495 MELGPEPPHR RRLLFACSPP PAPQPVVKAL FSTPAAGGLS PVTNLTVTMD BACU002427/1-535 MELGPEPPHR RRLLFACSPP PAPQPVVKAL FSTPAAGGLS PVTNLTVTMD 51 100 ENSTTRP00000015266/1-523 QLQGLG---- -------SEY EQPLEVR-NS CLQRMGSSES TDSGFCLDSP ENSP00000303706/1-524 QLQGLG---- -------SDY EQPLEVKNNS NLQRMGSSES TDSGFCLDSP ENSBTAP00000012611/1-525 QLQGLG---- -------SEY EQPIEVK-NS SLQRMGSSES TDSGFCLDSP bmy_05604T0/1-495 QLQGLG---- -------SEY EQPLEVR-NS SLQRMGSSES TDSGFCLDSP BACU002427/1-535 QLQGLGRAIE RVTFLGFSEY EQPLEVR-NS SLQRMGSSES TDSGFCLDSP 101 150 ENSTTRP00000015266/1-523 GPLDSKENLE NPMRRINSLP QKLLGCSPAL KRSHSDSLDH DVFQLIDQDE ENSP00000303706/1-524 GPLDSKENLE NPMRRIHSLP QKLLGCSPAL KRSHSDSLDH DIFQLIDPDE ENSBTAP00000012611/1-525 GPLDSKENLE NPMRRINSLP QKLLGCSPAL KRSHSDSLDH DVFQLIDQDE bmy_05604T0/1-495 GPLDSKENLE NSMRRINSLP QKLLGCSPAL KRSHSDSLDH DVFQLIDQDE BACU002427/1-535 GPLDSKENLE NSMRRINSLP QKLLGCSPAL KRSHSDSLDH DVFQLIDQDE 151 200 ENSTTRP00000015266/1-523 NKENEAFEFK KPVRPASRGC LHAHGLQEGK DLFTQRQNSA PARML-SNER ENSP00000303706/1-524 NKENEAFEFK KPVRPVSRGC LHSHGLQEGK DLFTQRQNSA PARMLSSNER ENSBTAP00000012611/1-525 NKENQVFEFK KPIRPASRGC LHVHGLEEGK DVFTQRQNSA PARMLSSNER bmy_05604T0/1-495 NKENEAFEFK KPVRPASRGC LHAHGLQEGK DLFTQRQNSA PARMLSSNER BACU002427/1-535 NKENEAFEFK KPVRPASRGC LHAHGLQEGK DLFTQRQNSA PARMLSSNER 201 250 ENSTTRP00000015266/1-523 DGSEPGHFTP FFMPHSPVTA TLSDEDDGFM DLLDGENLKN DEETPSCMAS ENSP00000303706/1-524 DSSEPGNFIP LFTPQSPVTA TLSDEDDGFV DLLDGENLKN EEETPSCMAS ENSBTAP00000012611/1-525 DGNEPGNSIP -FMPQSPVTP TLSDEDDGFM DLLDGENLKN DEETPSCMAS bmy_05604T0/1-495 DGSEPGHFTP FFMPQSPVTA TLSDEDDGFM DLLDGENLKN DEETPSCMAS BACU002427/1-535 DGSEPGHFTP FFMPQSPVTA TLSDEDDGFM DLLDGENLKN DEETPSCMAS 251 300 ENSTTRP00000015266/1-523 LWTAPLVMRR TTNLGNRCKL FDSPS-TCSS TIPSTLKRPD RSQEESPRGN ENSP00000303706/1-524 LWTAPLVM-R TTNLDNRCKL FDSPS-LCSS STRSVLKRPE RSQEESPPGS ENSBTAP00000012611/1-525 LWTAPLVMRR TNNLGNRCKL FDSPSASCSS TIRSMLKRPD RSLEESPGGS bmy_05604T0/1-495 LWTAPLVMRR TTNLVSPGWI NLKPS----Q EVLGLFSLPF KFSQ------ BACU002427/1-535 LWTAPLVMRR TTNLGNRCKL FDSPS-TCSS TILSTLKRTD RSQEESPRGN 301 350 ENSTTRP00000015266/1-523 RKRRKSVAGA SPEEAASPKK PQEXX-XXXX XXXXXXXXXX XXXXXXXXXX ENSP00000303706/1-524 TKRRKSMSGA SPKESTNPEK AHETL-HQSL SLASSPKGTI ENILDNDPRD ENSBTAP00000012611/1-525 RKRRKSVAGA SPEEAASPEK PQEILHHQSL SLASSPKGTI ENILDNDPRD bmy_05604T0/1-495 ---------- ---------- IRKIL-HQSL SLVSSPKGTI ENILDNDPRD BACU002427/1-535 RKRRKSADGA SPEEAASPKK PQEIL-HQSL SLVSSPKGTI ENILDNDPRD 351 400 ENSTTRP00000015266/1-523 XXXXXXKXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000303706/1-524 LIGDFSKGYL FHTVAGKHQD LKYISPEIMA SVLNGKFANL IKEFVIIDCR ENSBTAP00000012611/1-525 LIGDFSKGYL FHTVAGKHQD LKYISPEIIT SVLNGKFANL IKEFVIIDCR bmy_05604T0/1-495 LIGDFSKCYL FHTVAGKHQD LKYISPEIIA SVLSGKFANL IKEFVIIDCR BACU002427/1-535 LIGDFSKCYL FHTVAGKHQD LKYISPEIIA SVLSGKFANL IKEFVIIDCR 401 450 ENSTTRP00000015266/1-523 XXXXXXXXXX XGAVNLHMEE EVEDFLLKKP IVPTDGKRVI VVFHCEFSSE ENSP00000303706/1-524 YPYEYEGGHI KGAVNLHMEE EVEDFLLKKP IVPTDGKRVI VVFHCEFSSE ENSBTAP00000012611/1-525 YPYEYEGGHI KGAVNLHMEE EVEEFLLKKP IVPTDGKRVI VVFHCEFSSE bmy_05604T0/1-495 YPYEYEGGHI KGAVNLHMEE EVEDFLLKKP IVPTDGKRVI VVFHCEFSSE BACU002427/1-535 YPYEYEGGHI KGAVNLHMEE EVEDFLLKKP IVPTDGKRVI VVFHCEFSSE 451 500 ENSTTRP00000015266/1-523 RGPRMCRYVR ERDRLGNEYP KLHYPELYVL KGGYKEFFLK CQSHCEPPSY ENSP00000303706/1-524 RGPRMCRYVR ERDRLGNEYP KLHYPELYVL KGGYKEFFMK CQSYCEPPSY ENSBTAP00000012611/1-525 RGPRMCRYVR ERDRLGNEYP KLHYPELYVL KGGYKEFFLK CQSHCEPPSY bmy_05604T0/1-495 RGPRMCRYVR ERDRLGNEYP KLHYPELYVL KGGYKEFFLK CQSHCEPPSY BACU002427/1-535 RGPRMCRYVR ERDRLGNEYP KLHYPELYVL KGGYKEFFLK CQSHCEPPSY 501 550 ENSTTRP00000015266/1-523 RPMHHEDFKE DLKKFRTKSR TWAGEKSKRE MYSRLKKL ENSP00000303706/1-524 RPMHHEDFKE DLKKFRTKSR TWAGEKSKRE MYSRLKKL ENSBTAP00000012611/1-525 RPMHHEDFKE DLKKFRTKSR TWAGEKSKRE MYSRLKKL bmy_05604T0/1-495 RPMHHEDFKE DLKKFRTKSR TWAGEKSKRE MYSRLKKL BACU002427/1-535 RPMHHEDFKE DLKKFRTKSR TWAGEKSKRE MYSRLKKL