KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:27 2014 Check: 00 .. Name: ENSTTRP00000015547/1-879 Len: 926 Check: 8747 Weight: 1.00 Name: ENSBTAP00000012612/1-873 Len: 926 Check: 3795 Weight: 1.00 Name: ENSP00000377390/1-879 Len: 926 Check: 9718 Weight: 1.00 Name: bmy_15182T0/1-817 Len: 926 Check: 115 Weight: 1.00 Name: BACU003559/1-917 Len: 926 Check: 3041 Weight: 1.00 // 1 50 ENSTTRP00000015547/1-879 MFWKFDLHSS SHIDTLLERE DVTLKELMDE EDVLQECKAQ NRKLIEFLLK ENSBTAP00000012612/1-873 MFWKFDLHSS SHIDTLLERE DVTLKELMDE EDVLQECKAQ NRKLIEFLLK ENSP00000377390/1-879 MFWKFDLHSS SHIDTLLERE DVTLKELMDE EDVLQECKAQ NRKLIEFLLK bmy_15182T0/1-817 MFWKFDLHSS SHIDTLLERE DVTLKELMDE EDVLQECKAQ NRKLIEFLLK BACU003559/1-917 MFWKFDLHSS SHIDTLLERE DVTLKELMDE EDVLQECKAQ NRKLIEFLLK 51 100 ENSTTRP00000015547/1-879 AECLEDLVSF IIEEPPQDMD EKIRYKYPNI SCELLTSDVS QMNDRLGEDE ENSBTAP00000012612/1-873 AECLEDLVSF IIEEPPQDMD EKIRYKYPNI SCELLTSDVS QMNDRLGEDE ENSP00000377390/1-879 AECLEDLVSF IIEEPPQDMD EKIRYKYPNI SCELLTSDVS QMNDRLGEDE bmy_15182T0/1-817 AECLEDLVSF IIEEPPQDMD EKIRYKYPNI SCELLTSDVS QMNDRLGEDE BACU003559/1-917 AECLEDLVSF IIEEPPQDMD EKIRYKYPNI SCELLTSDVS QMNDRLGEDE 101 150 ENSTTRP00000015547/1-879 SLLMKLYSFL LNDSPLNPLL ASFFSKVLSI LISRKPEQIV DFLKKKRDFV ENSBTAP00000012612/1-873 SLLMKLYSFL LNDSPLNPLL ASFFSKVLSI LISRKPEQIV DFLKKKRDFV ENSP00000377390/1-879 SLLMKLYSFL LNDSPLNPLL ASFFSKVLSI LISRKPEQIV DFLKKKHDFV bmy_15182T0/1-817 SLLMKLYSFL LNDSPLNPLL ASFFSKVLSI LISRKPEQIV DFLKKKRDFV BACU003559/1-917 SLLMKLYSFL LNDSPLNPLL ASFFSKVLSI LISRKPEQIV DFLKKKRDFV 151 200 ENSTTRP00000015547/1-879 DLIMKHIGTS AIMDLLLRLL TCIEPPQPRQ DVLNWLNEEK IIQRLVEIVH ENSBTAP00000012612/1-873 DLIIKHIGTS AIMDLLLRLL TCIEPPQPRQ EVLNWLNEEK IIQRLVEIVH ENSP00000377390/1-879 DLIIKHIGTS AIMDLLLRLL TCIEPPQPRQ DVLNWLNEEK IIQRLVEIVH bmy_15182T0/1-817 DLIMKHIGTS AIMDLLLRLL TCIEPPQPRQ DVLNWLNEEK IIQRLVEIVH BACU003559/1-917 DLIMKHIGTS AIMDLLLRLL TCIEPPQPRQ DVLNWLNEEK IIQRLVEIVH 201 250 ENSTTRP00000015547/1-879 PSQEEDXXXX XXXXXXXXXX XXXXXXXXXX XSTEPDPLLA TLEKQEIIEQ ENSBTAP00000012612/1-873 PSQEEDRHSN AAQSLCEIVR LSRDQMLQVQ SSAEPDPLLA TLEKQEIIEQ ENSP00000377390/1-879 PSQEEDRHSN ASQSLCEIVR LSRDQMLQIQ NSTEPDPLLA TLEKQEIIEQ bmy_15182T0/1-817 PSQEEDRHSN ASQSLCEIVR LSRDQMLQIQ NSTEPDPLLA TLEKQEIIEQ BACU003559/1-917 PSQEEDRHSN ASQSLCEIVR LSRDQMLQIQ NSTEPDPLLA TLEKQEIIEQ 251 300 ENSTTRP00000015547/1-879 LLSNIFHKEK NESAIVSAVQ ILLALLETRR PTFEGHIEIC PPGMSHSACS ENSBTAP00000012612/1-873 LLSNIFHTEK NESAIVSAIQ ILLTLLETRR PTFEGHIEIC PPGMSHSACS ENSP00000377390/1-879 LLSNIFHKEK NESAIVSAIQ ILLTLLETRR PTFEGHIEIC PPGMSHSACS bmy_15182T0/1-817 LLSNIFHKEK NESAIVSAVQ ILLALLETRR PTFEGHIEIC PPGMSHSACS BACU003559/1-917 LLSNIFHKEK NESAIVSAVQ ILLALLETRR PTFEGHIEIC PPGMSHSACS 301 350 ENSTTRP00000015547/1-879 VNKSVLEAIR GRLGSFHELL LEPPKKSVMK TTWGVLDPPV GNTRLNVIRL ENSBTAP00000012612/1-873 VNKSVLEAIR GRLGSFHELL LEPPKKSVMK TTWGVLDPPV GNTRLSVVRL ENSP00000377390/1-879 VNKSVLEAIR GRLGSFHELL LEPPKKSVMK TTWGVLDPPV GNTRLNVIRL bmy_15182T0/1-817 VNKSVLEAIR GRLGSFHELL LEPPKKSVMK TTWGVLDPPV GNTRLNVIRL BACU003559/1-917 VNKSVLEAIR GRLGSFHELL LEPPKKSVMK TTWGVLDPPV GNTRLNVIRL 351 400 ENSTTRP00000015547/1-879 ISSLLQTNTS SINGDLMELN SIGVILDMFF KYTWNNFLHT QVEICIALIL ENSBTAP00000012612/1-873 VSSLLQTNTS SINGDLMELN SIGVILDMFF KYTWNNFLHT QVEICIALIL ENSP00000377390/1-879 ISSLLQTNTS SINGDLMELN SIGVILNMFF KYTWNNFLHT QVEICIALIL bmy_15182T0/1-817 ISSLLQTNTS SINGDLMELN SIGVILDMFF KYTWNNFLHT QVEICIALIL BACU003559/1-917 ISSLLQTNTS SINGDLMELN SIGVILDMFF KYTWNNFLHT QVEICIALIL 401 450 ENSTTRP00000015547/1-879 ASPFENTENS TITDQDSTGD NLLLKHLFQK CQLIERILDA WEMNEKKQAE ENSBTAP00000012612/1-873 ASPFENTENS TITDQDSAGD NLLLKHLFQK CQLIERILDA WEMNEKKQAE ENSP00000377390/1-879 ASPFENTENA TITDQDSTGD NLLLKHLFQK CQLIERILEA WEMNEKKQAE bmy_15182T0/1-817 ASPFENTENS TITDQDSTGD NLLLKHLFQK CQLIERVLDA WEMNEKKQAE BACU003559/1-917 ASPFENTENS TITDQDSTGD NLLLKHLFQK CQLIERILDA WEMNEKKQAE 451 500 ENSTTRP00000015547/1-879 GGRRHGYMGH LTRIANCIVH STDKGPNSAL VQQLIKDLPD EVRERWETFC ENSBTAP00000012612/1-873 GGRRHGYMGH LTRIANCIVH SAEKGPSSAL VQQLVRDLPD EVRERWETFC ENSP00000377390/1-879 GGRRHGYMGH LTRIANCIVH STDKGPNSAL VQQLIKDLPD EVRERWETFC bmy_15182T0/1-817 GGRRHGYMGH LTRIANCIVH STDKGPSSAL VQQLIKDLPD EVRERWETFC BACU003559/1-917 GGRRHGYMGH LTRIANCIVH STDKGPSSAL VQQLIKDLPD EVRERWETFC 501 550 ENSTTRP00000015547/1-879 TSSLGETNKR NTVDLVTTCH IHSSSDDEID FKETGFSQDS SLQQAFSDYQ ENSBTAP00000012612/1-873 TSSLGETNKR NTVDLVTTCH IHSSSDDEID FKETGFSQDS SLQQAFSDYQ ENSP00000377390/1-879 TSSLGETNKR NTVDLVTTCH IHSSSDDEID FKETGFSQDS SLQQAFSDYQ bmy_15182T0/1-817 TSSLGETNKR NTVDLVTTCH IHSSSDDEID FKETGFSQDS SLQQAFSDYQ BACU003559/1-917 TSSLGETNKR NT---VTTCH IHSSSDDEID FKETGFSQDS SLQQAFSDYQ 551 600 ENSTTRP00000015547/1-879 MQQMTSNFID QFGFNDEKFA DQDDIGNVSF DRVSXXXXXX XXXXXGNIAL ENSBTAP00000012612/1-873 MQQMTSNFID QFGFNDEKFA DQDDIGNVSF DRVSDINFTL NTNESGNIAL ENSP00000377390/1-879 MQQMTSNFID QFGFNDEKFA DQDDIGNVSF DRVSDINFTL NTNESGNIAL bmy_15182T0/1-817 MQQMTSNFID QFGFNDEKFA DQDDIGNVSF DRVSDINFTL NTNESGNIAL BACU003559/1-917 MQQMTSNFID QFGFNDEKFA DQDDIGNVSF DRVSDINFTL NTNESGNIAL 601 650 ENSTTRP00000015547/1-879 FEACCKERIQ QFDDGGSDEE DIWEEKHIAF TPESQRRSSS GSTDSEESTD ENSBTAP00000012612/1-873 FEACCKERIQ QFDDGGSDEE DIWEEKHIAF TPESQRRSSS GSTDSEESTD ENSP00000377390/1-879 FEACCKERIQ QFDDGGSDEE DIWEEKHIAF TPESQRRSSS GSTDSEESTD bmy_15182T0/1-817 FEACCKERIQ QFDDGGSDEE DIWEEKHIAF TPESQRRSSS GSTDSEESTD BACU003559/1-917 FEACCKERIQ QFDDGGSDEE DIWEEKHIAF TPESQRRSSS GSTDSEESTD 651 700 ENSTTRP00000015547/1-879 SEEEDGAKQD LFESSNANTE DKMEVDLNEX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000012612/1-873 SEEEDGAKQD LFESSTANTE DKMEVDLSEP PNWSANFDVP METTHGAPLD ENSP00000377390/1-879 SEEEDGAKQD LFEPSSANTE DKMEVDLSEP PNWSANFDVP METTHGAPLD bmy_15182T0/1-817 SEEEDGAKQD VCESSSASAE DKMEVDLNEP PSWSASFDVP METTHGAPLD BACU003559/1-917 SEEEDGAKQD LFESSSANTE DKMEVDLNEP PSWSASFDVP METTHGAPLD 701 750 ENSTTRP00000015547/1-879 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XTKDSLRSSS PVEMETSTEP ENSBTAP00000012612/1-873 SVGSDVWSTE EPMPTKETGW ASFSEFTSSL STKDALRSNS PVEMETSSEP ENSP00000377390/1-879 SVGSDVWSTE EPMPTKETGW ASFSEFTSSL STKDSLRSNS PVEMETSTEP bmy_15182T0/1-817 SVGSDVWSTE EPVPTKETGW ASFSEFASSL STKDSLRSSS PVEMETSTEP BACU003559/1-917 SVGSDVWSTE EPVPTKETGW ASFSEFASSL STKDSLRSSS PVEMETSTEP 751 800 ENSTTRP00000015547/1-879 VGPLAPSVAA LAVQPEAPGS VAMEASSDGE EDAESTDKVT ETVMNGGVKE ENSBTAP00000012612/1-873 MDPLTPSVAA LAVQPEAPGS VAMEASSDGE EDAESTDKVT ETVMNGGMKE ENSP00000377390/1-879 MDPLTPSAAA LAVQPEAAGS VAMEASSDGE EDAESTDKVT ETVMNGGMKE bmy_15182T0/1-817 VGPLAPSVAA LAVQPEAPGS VAMEASSDGE EDAENTDKVT ETVMNGGVKE BACU003559/1-917 VGPLAPSAAA LAVQPEAPGS VAMEASSDGE EDAENTDKVT ETVMNGGVKE 801 850 ENSTTRP00000015547/1-879 TLSLTVDAKT ETAVFKRLLE GRSEEGKLST SQDAACKDVA ESLETAEGKS ENSBTAP00000012612/1-873 TLSLTVDAKT ETAVFK---- --SEEGKLST SQDAACKDVE ESPETAEGKS ENSP00000377390/1-879 TLSLTVDAKT ETAVFKRVLK SYREEGKLST SQDAACKDAE ECPETAEAKC bmy_15182T0/1-817 TLSLTVDAKT ETAVFKR--- ---------- ---------- ---------- BACU003559/1-917 TLSLTVDAKT ETAVFK---- --SEEGKLST SQDAACKDAE ESLETAEGKS 851 900 ENSTTRP00000015547/1-879 AAPRTPSSSL EQRTEQSSMP GDAAVNGPV- ---------- ---------- ENSBTAP00000012612/1-873 VAPRPPSSSP EQRTEQLSVP GDVAVNGPV- ---------- ---------- ENSP00000377390/1-879 AAPRPPSSSP EQRTGQPSAP GDTSVNGPV- ---------- ---------- bmy_15182T0/1-817 ---------- ---------- ---------- ---------- ---------- BACU003559/1-917 AAPQPPSSPE QRLSPWSGGT GPARAPAPKG HPGLCAAPQA GRGRPPVAPE 901 950 ENSTTRP00000015547/1-879 ---------- ---------- ------ ENSBTAP00000012612/1-873 ---------- ---------- ------ ENSP00000377390/1-879 ---------- ---------- ------ bmy_15182T0/1-817 ---------- ---------- ------ BACU003559/1-917 FAWEVEDLPL DHKDLRSALR RLNCFD