KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:29 2014 Check: 00 .. Name: ENSTTRP00000015639/1-279 Len: 352 Check: 5380 Weight: 1.00 Name: BACU020452/1-258 Len: 352 Check: 4847 Weight: 1.00 Name: bmy_01439T0/1-326 Len: 352 Check: 1775 Weight: 1.00 Name: ENSP00000404991/1-339 Len: 352 Check: 8955 Weight: 1.00 Name: ENSBTAP00000012636/1-339 Len: 352 Check: 1222 Weight: 1.00 // 1 50 ENSTTRP00000015639/1-279 MAGQLERCER EWHELEGEFQ ELQDIHRIYR QKLEELTALQ TSCSSSISKQ BACU020452/1-258 ---------- ---------- ---DTHRIYR QKLEELTALQ TSCSSSINKQ bmy_01439T0/1-326 MASQLERCER EWHELEGEFQ ELQVGPGHLV LKLCYL---- -MCSV----- ENSP00000404991/1-339 MSGQLERCER EWHELEGEFQ ELQETHRIYK QKLEELAALQ TLCSSSISKQ ENSBTAP00000012636/1-339 MSGQLERCER EWHELEGEFQ ELQETHRIYK QKLEELNALQ TSCSSSINKQ 51 100 ENSTTRP00000015639/1-279 KTRLKDLKRT LQRYKRHTSR EEAELIQQLG ANVMERQNVF FDMEAYLPKK BACU020452/1-258 KTRLKDLKHT LQRYKRHASR EEAELVQQLG ASIKERQNIF FDMEAYLPKK bmy_01439T0/1-326 ---FPFLLAQ PGRYKRHASR EEAELVQQLG ASIKERQNIF FDMEAYLPKK ENSP00000404991/1-339 KKHLKDLKLT LQRCKRHASR EEAELVQQMA ANIKERQDVF FDMEAYLPKK ENSBTAP00000012636/1-339 KTRLKDLKLT LQRYKRHASR EEAELVQQMG ANIKERQNVF FDMEAYLPKK 101 150 ENSTTRP00000015639/1-279 NGLYLNLVLG NVNVTLLSNQ AKFAYKDEYE KFKLYLTIIL LLGAVACRFV BACU020452/1-258 NGLYLNLVLG NVNVTLLSNQ AKFAYKDEYE KFKLYLTIIL LLGAVACRFV bmy_01439T0/1-326 NGLYLNLVLG NVNVTLLSNQ AKFAYKDEYE KFKLYLTIIL LLGAVACRFV ENSP00000404991/1-339 NGLYLNLVLG NVNVTLLSNQ AKFAYKDEYE KFKLYLTIIL LLGAVACRFV ENSBTAP00000012636/1-339 NGLYLNLVLG NVNVTLLSNQ AKFAYKDEYE KFKLYLTIIL LLGAVACRFF 151 200 ENSTTRP00000015639/1-279 LHYXXXXXXX XXXXXXXXXX ---XXXXXXX XXXXXXXXXX XXXXXXXXXX BACU020452/1-258 LYYSDGN--- ------YWSS PRDMAIKKVE LGFKSSFL-- FWLEQRWGGD bmy_01439T0/1-326 LHYRVTDEVF NFLLVWYYCT ---LTIRESI LISNGSRIKG WWVSHHYVST ENSP00000404991/1-339 LHYRVTDEVF NFLLVWYYCT ---LTIRESI LISNGSRIKG WWVSHHYVST ENSBTAP00000012636/1-339 LHYRVTDEVF NFLLVWYYCT ---LTIRESI LISNGSRIKG WWVSHHYVST 201 250 ENSTTRP00000015639/1-279 ---------- XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX CVQFLQYYYQ BACU020452/1-258 EQMISERGLI LAFPPLLCRP NGLIYQKFRD QFLAFSIFQS CVQFLQYYYQ bmy_01439T0/1-326 ---------- FLSGVMLTWP NGLIYQKFRN QFLAFSIFQS CVQFLQYYYQ ENSP00000404991/1-339 ---------- FLSGVMLTWP NGPIYQKFRN QFLAFSIFQS CVQFLQYYYQ ENSBTAP00000012636/1-339 ---------- FLSGVMLTWP NGLIYQKFRN QFLAFSIFQS CVQFLQYYYQ 251 300 ENSTTRP00000015639/1-279 RGCLYRLRAL GERNHLDLTV EGFQSWMWRG LTFLLPFLFC DH-------- BACU020452/1-258 RGCLYRLRAL GERNHLDLTV EGFQSWMWRG LTFLLPFLFC GH-------- bmy_01439T0/1-326 RGCLYRLRAL GERNHLDLTV EGFQSWMWRG LTFLLPFLFC GHFWQLYNAI ENSP00000404991/1-339 RGCLYRLRAL GERNHLDLTV EGFQSWMWRG LTFLLPFLFC GHFWQLYNAV ENSBTAP00000012636/1-339 RGCLYRLRAL GERNHLDLTV EGFQSWMWRG LTFLLPFLFC GHFWQLYNAV 301 350 ENSTTRP00000015639/1-279 ---------- ---------- ---------- ---------- ---------- BACU020452/1-258 ---------- ---------- ---------- ---------- ---------- bmy_01439T0/1-326 TLFELSSHEE CREWQVFVLA LTFLVLFLGN FLTTLKVVHT KLQKNRSEAK ENSP00000404991/1-339 TLFELSSHEE CREWQVFVLA FTFLILFLGN FLTTLKVVHA KLQKNRGKTK ENSBTAP00000012636/1-339 TLFELSSHEE CREWQVFVLA LTFLVLFLGN FLTTLKVVHT KLQQNRSKAK 351 400 ENSTTRP00000015639/1-279 -- BACU020452/1-258 -- bmy_01439T0/1-326 KP ENSP00000404991/1-339 QP ENSBTAP00000012636/1-339 KP