KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:30 2014 Check: 00 .. Name: ENSBTAP00000012652/1-631 Len: 686 Check: 5014 Weight: 1.00 Name: ENSP00000398824/1-680 Len: 686 Check: 1978 Weight: 1.00 Name: ENSTTRP00000000983/1-683 Len: 686 Check: 7348 Weight: 1.00 Name: bmy_04102T0/1-353 Len: 686 Check: 8984 Weight: 1.00 Name: BACU008942/1-683 Len: 686 Check: 7229 Weight: 1.00 // 1 50 ENSBTAP00000012652/1-631 ---------- ---------- ---------- ---------- ---------- ENSP00000398824/1-680 MELQTLQEAL KVEIQVHQKL VAQMKQDPQN ADLKKQLHEL QAKITALSEK ENSTTRP00000000983/1-683 MELQTLQEAL KVEIQVHQKL VAQMKQDPQN ADLKKQLHEL QAKITALSEK bmy_04102T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU008942/1-683 MELQTLQEAL KVEIQVHQKL VAQMKQDPQN ADLKKQLHEL QAKITALSEK 51 100 ENSBTAP00000012652/1-631 -KRVVEQLRK NLIVKQEQPD KFQIQPLPQS ENKLQTAQQQ PLQQLQQQQH ENSP00000398824/1-680 QKRVVEQLRK NLIVKQEQPD KFQIQPLPQS ENKLQTAQQQ PLQQLQQQQQ ENSTTRP00000000983/1-683 QKRVVEQLRK NLIVKQEQPD KFQIQPLPQS ENKLQTAQQQ PLQQLQQQQQ bmy_04102T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU008942/1-683 QKRVVEQLRK NLIVKQEQPD KFQIQPLPQS ENKLQTAQQQ PLQQLQQQQQ 101 150 ENSBTAP00000012652/1-631 HHHH--AQAA ASSPGLTAPQ KTVTTASMIT TKTLPLVLKA ATATMPASVV ENSP00000398824/1-680 YHHHHAQQSA AASPNLTASQ KTVTTASMIT TKTLPLVLKA ATATMPASVV ENSTTRP00000000983/1-683 YHHH--AQSA ASSPSLTASQ KTVTTASMIT TKTLPLVLKA ATATMPASVV bmy_04102T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU008942/1-683 YHHH--AQSA ASSPSLTASQ KTVTTASMIT TKTLPLVLKA ATATMPASVV 151 200 ENSBTAP00000012652/1-631 GQRPTIAMVT AINSQKAVLS TDVQNTPVNL QTSSKVTGPG AEAVQIVAKN ENSP00000398824/1-680 GQRPTIAMVT AINSQKAVLS TDVQNTPVNL QTSSKVTGPG AEAVQIVAKN ENSTTRP00000000983/1-683 GQRPTIAMVT AINSQKAVLS TDVQNTPVNL QTSSKVTGPG AEAVQIVAKN bmy_04102T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU008942/1-683 GQRPTIAMVT AINSQKAVLS TDVQNTPVNL QTSSKVTGPG AEAVQIVAKN 201 250 ENSBTAP00000012652/1-631 TVTL-VQATP PQPIKVPQFI PPPRLTPRPN FLPQVRPKPV AQNNIPIAPA ENSP00000398824/1-680 TVTL-VQATP PQPIKVPQFI PPPRLTPRPN FLPQVRPKPV AQNNIPIAPA ENSTTRP00000000983/1-683 TVTLQVQATP PQPIKVPQFI PPPRLTPRPN FLPQVRPKPV AQNNIPIAPA bmy_04102T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU008942/1-683 TVTLQVQATP PQPIKVPQFI PPPRLTPRPN FLPQVRPKPV AQNNIPIAPA 251 300 ENSBTAP00000012652/1-631 PPPMLAAPQL IQRPVMLTKF TPTTLPTSQN SIHPVRVVNG QTATIAKTFP ENSP00000398824/1-680 PPPMLAAPQL IQRPVMLTKF TPTTLPTSQN SIHPVRVVNG QTATIAKTFP ENSTTRP00000000983/1-683 PPPMLAAPQL IQRPVMLTKF TPTTLPTSQN SIHPVRVVNG QTATIAKTFP bmy_04102T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU008942/1-683 PPPMLAAPQL IQRPVMLTKF TPTTLPTSQN SIHPVRVVNG QTATIAKTFP 301 350 ENSBTAP00000012652/1-631 MAQLTSIVIA TPGTRLAGPQ TVQLSKPSLE KQTVKSHTET DEKQTESRTV ENSP00000398824/1-680 MAQLTSIVIA TPGTRLAGPQ TVQLSKPSLE KQTVKSHTET DEKQTESRTI ENSTTRP00000000983/1-683 MAQLTSIVIA TPGTRLAGPQ TVQLSKPSLE KQTIKSHTET DEKQTESRTV bmy_04102T0/1-353 ---------- ---------- ---------- --TIKSHTET DEKQTESRTV BACU008942/1-683 MAQLTSIVIA TPGTRLAGPQ TVQLSKPSLE KQTIKSHTET DEKQTESRTV 351 400 ENSBTAP00000012652/1-631 TPPAAPKPKR EENPQKLAFM VSLGLVTHDH LEEEIQSKRQ ERKRRTTANP ENSP00000398824/1-680 TPPAAPKPKR EENPQKLAFM VSLGLVTHDH L-EEIQSKRQ ERKRRTTANP ENSTTRP00000000983/1-683 TPPTAPKPKR EENPQKLAFM VSLGLVTHDH L-EEIQSKRQ ERKRRTTANP bmy_04102T0/1-353 TPPTAPKPKR EENPQKLAFM VSLGLVTHDH L-EEIQSKRQ ERKRRTTANP BACU008942/1-683 TPPTAPKPKR EENPQKLAFM VSLGLVTHDH L-EEIQSKRQ ERKRRTTANP 401 450 ENSBTAP00000012652/1-631 VYSGAVFEPE RKKSAVTYLN STMHPGTRKR GRPPKYNAVL GFGALTPTSP ENSP00000398824/1-680 VYSGAVFEPE RKKSAVTYLN STMHPGTRKR GRPPKYNAVL GFGALTPTSP ENSTTRP00000000983/1-683 VYSGAVFEPE RKKSAVTYLN STMHPGTRKR GRPPKYNAVL GFGALTPTSP bmy_04102T0/1-353 VYSGAVFEPE RKKSAVTYLN STMHPGTRKR GRPPKYNAVL GFGALTPTSP BACU008942/1-683 VYSGAVFEPE RKKSAVTYLN STMHPGTRKR GRPPKYNAVL GFGALTPTSP 451 500 ENSBTAP00000012652/1-631 PSSHPDSPEN EKTETTFTFP ASVQPVSLPS PTSTDGDIHE DFCSVCRKSG ENSP00000398824/1-680 QSSHPDSPEN EKTETTFTFP APVQPVSLPS PTSTDGDIHE DFCSVCRKSG ENSTTRP00000000983/1-683 PSSHPDSPEN EKTETTFTFP APVQPVSLPS PTSTDGDIHE DFCSVCRKSG bmy_04102T0/1-353 PSSHPDSPEN EKTETTFTFP APVQPVSLPS PTSTDGDIHE DFCSVCRKSG BACU008942/1-683 PSSHPDSPEN EKTETTFTFP APVQPVSLPS PTSTDGDIHE DFCSVCRKSG 501 550 ENSBTAP00000012652/1-631 QLLMCDTCSR VYHLDCLDPP LKTIPKGMWI CPRCQDQMLK KEEAIPWPGT ENSP00000398824/1-680 QLLMCDTCSR VYHLDCLDPP LKTIPKGMWI CPRCQDQMLK KEEAIPWPGT ENSTTRP00000000983/1-683 QLLMCDTCSR VYHLDCLDPP LKTIPKGMWI CPRCQDQMLK KEEAIPWPGT bmy_04102T0/1-353 QLLMCDTCSR VYHLDCLDPP LKTIPKGMWI CPRCQDQMLK KEEAIPWPGT BACU008942/1-683 QLLMCDTCSR VYHLDCLDPP LKTIPKGMWI CPRCQDQMLK KEEAIPWPGT 551 600 ENSBTAP00000012652/1-631 LAIVHSYIAY KAAKEEEKQK LLKWSSDLKQ EREQLEQKVK QLSSSISKCM ENSP00000398824/1-680 LAIVHSYIAY KAAKEEEKQK LLKWSSDLKQ EREQLEQKVK QLSNSISKCM ENSTTRP00000000983/1-683 LAIVHSYIAY KAAKEEEKQK LLKWSSDLKQ EREQLEQKVK QLSNSISKCM bmy_04102T0/1-353 LAIVHSYIAY KAAKEEEKQK LLKWSSDLKQ EREQLEQKVK QLSNSISKCM BACU008942/1-683 LAIVHSYIAY KAAKEEEKQK LLKWSSDLKQ EREQLEQKVK QLSNSISKCM 601 650 ENSBTAP00000012652/1-631 EMKNTILARQ KEMHSSLEKV KQLIRLIHGI DLSKPVDSEA TVGALSNGPD ENSP00000398824/1-680 EMKNTILARQ KEMHSSLEKV KQLIRLIHGI DLSKPVDSEA TVGAISNGPD ENSTTRP00000000983/1-683 EMKNTILARQ KEMHSSLEKV KQLIRLIHGI DLSKPVDSEA TLGAVSNGPD bmy_04102T0/1-353 EMKNTILARQ KEMHSSLEKV KQLIRLIHGI DLSKPVDSEA TLGAVSNGPD BACU008942/1-683 EMKNTILARQ KEMHSSLEKV KQLIRLIHGI DLSKPVDSEA TLGAVSNGPD 651 700 ENSBTAP00000012652/1-631 CTPPANASTS TPAPSPPSS- SSQSCTANCN PGEETK ENSP00000398824/1-680 CTPPANAATS TPAPSP---- SSQSCTANCN QGEETK ENSTTRP00000000983/1-683 CTPPANASTS TPVPSPPPSS SNQSCTANCN QGEETK bmy_04102T0/1-353 CTPPANASTS TPAPSPPSSS SSQSCTANCS QGEETK BACU008942/1-683 CTPPANASTS TPAPSPPSSS SSQSCTANCS QGEETK