KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:32 2014 Check: 00 .. Name: bmy_00985T0/1-540 Len: 1259 Check: 767 Weight: 1.00 Name: ENSTTRP00000010907/1-745 Len: 1259 Check: 6184 Weight: 1.00 Name: ENSP00000248929/1-749 Len: 1259 Check: 5728 Weight: 1.00 Name: BACU013395/1-1255 Len: 1259 Check: 1169 Weight: 1.00 Name: ENSBTAP00000012674/1-747 Len: 1259 Check: 443 Weight: 1.00 // 1 50 bmy_00985T0/1-540 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010907/1-745 ---------- ---------- ---------- ---------- ---------- ENSP00000248929/1-749 ---------- ---------- ---------- ---------- ---------- BACU013395/1-1255 MFRSRTSASV LGVPVRLRRC RVFWMAAGSD SGGREAACGH DSYRSPLASR ENSBTAP00000012674/1-747 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_00985T0/1-540 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010907/1-745 ---------- ---------- ---------- ---------- ---------- ENSP00000248929/1-749 ---------- ---------- ---------- ---------- ---------- BACU013395/1-1255 YASPEMCFVF SDRYKFRTWR QLWLWLAEAE QTLGLPITDE QIQEMKSNLD ENSBTAP00000012674/1-747 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_00985T0/1-540 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010907/1-745 ---------- ---------- ---------- ---------- ---------- ENSP00000248929/1-749 ---------- ---------- ---------- ---------- ---------- BACU013395/1-1255 NIDFKMAAEE EKQLRHDVMA HVHTFAHCCP KAAGIIHLGA TSCYVGDNTD ENSBTAP00000012674/1-747 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_00985T0/1-540 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010907/1-745 ---------- ---------- ---------- ---------- ---------- ENSP00000248929/1-749 ---------- ---------- ---------- ---------- ---------- BACU013395/1-1255 LIILRNAFDL LLPKLARVIS RLADFAKERA DLPTLGFTHF QPAQLTTVGK ENSBTAP00000012674/1-747 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_00985T0/1-540 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010907/1-745 ---------- ---------- ---------- ---------- ---------- ENSP00000248929/1-749 ---------- ---------- ---------- ---------- ---------- BACU013395/1-1255 RCCLWIQDLC MDLQNLKRVQ DDLRFRGVKG TTGTQASFLQ LFEGDDQKVE ENSBTAP00000012674/1-747 ---------- ---------- ---------- ---------- ---------- 251 300 bmy_00985T0/1-540 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010907/1-745 ---------- ---------- ---------- ---------- ---------- ENSP00000248929/1-749 ---------- ---------- ---------- ---------- ---------- BACU013395/1-1255 QLDKMVTEKA GFKRAFIITG QTYTRKVDIE VLSALAGLGA SVHKICTDIR ENSBTAP00000012674/1-747 ---------- ---------- ---------- ---------- ---------- 301 350 bmy_00985T0/1-540 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010907/1-745 ---------- ---------- ---------- ---------- ---------- ENSP00000248929/1-749 ---------- ---------- ---------- ---------- ---------- BACU013395/1-1255 LLASLKELEE PFEKQQIGSS AMPYKRNPMR SERCCSLARH LMTLVMDPLQ ENSBTAP00000012674/1-747 ---------- ---------- ---------- ---------- ---------- 351 400 bmy_00985T0/1-540 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010907/1-745 ---------- ---------- ---------- ---------- ---------- ENSP00000248929/1-749 ---------- ---------- ---------- ---------- ---------- BACU013395/1-1255 TASVQWFERT LDDSANRRMC LAEAFLTADT ILNTLQNISE GLVVYPRVIE ENSBTAP00000012674/1-747 ---------- ---------- ---------- ---------- ---------- 401 450 bmy_00985T0/1-540 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010907/1-745 ---------- ---------- ---------- ---------- ---------- ENSP00000248929/1-749 ---------- ---------- ---------- ---------- ---------- BACU013395/1-1255 RRIRQELPFM ATENIIMAMV KAGGNRQDCH EKIRVLSHQA AAVVKQEGGE ENSBTAP00000012674/1-747 ---------- ---------- ---------- ---------- ---------- 451 500 bmy_00985T0/1-540 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010907/1-745 ---------- ---------- ---------- ---------- ---------- ENSP00000248929/1-749 ---------- ---------- ---------- ---------- ---------- BACU013395/1-1255 NDLIERIQAD AYFSPIHSQL DHLLDPSSFT GRASQQVRRF LEEEVHPLLR ENSBTAP00000012674/1-747 ---------- ---------- ---------- ---------- ---------- 501 550 bmy_00985T0/1-540 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010907/1-745 -------MSG SHIPSASGPF SALTPSMWPQ EILAKYTQKE EAVEQPEFCY ENSP00000248929/1-749 -------MSG SHTP-ACGPF SALTPSIWPQ EILAKYTQKE ESAEQPEFYY BACU013395/1-1255 PYESVMKNTG SHIPSASGPF SALTPSMWPQ EILAKYTQKE EAVEQPEFCY ENSBTAP00000012674/1-747 -------MSG SHVPSANGPF SALTPSMWPQ EILAKYAQEE ATVEQPEFRY 551 600 bmy_00985T0/1-540 ---------- GADGAPRP-- --GQLLEDPP QRLRWQAHLE FTHNHDVGDL ENSTTRP00000010907/1-745 DEFGFRVDK- EADGAPRP-- --GQLLEDPP QRLRWQAHLE FTHNHDVGDL ENSP00000248929/1-749 DEFGFRVYKE EGDEPGSSLL ANSPLMEDAP QRLRWQAHLE FTHNHDVGDL BACU013395/1-1255 DEFGFRVDKE GADGAPRP-- --GQLLEDPP QRLRWQAHLE FTHNHDVGDL ENSBTAP00000012674/1-747 DEFGFRVDKE DADGIPYS-- --GQLLEDPP QRLRWQAHLE FTHNHDVGDL 601 650 bmy_00985T0/1-540 TWDKIAISLP RSEKLRSLVL AGVPHSMRPQ LWMRLSGALQ KKRNSELSYR ENSTTRP00000010907/1-745 TWDKIAISLP RSEKLRSLVL AGVPHSMRPQ LWMRLSGALQ KKRNSELSYR ENSP00000248929/1-749 TWDKIAVSLP RSEKLRSLVL AGIPHGMRPQ LWMRLSGALQ KKRNSELSYR BACU013395/1-1255 TWDKIAISLP RSEKLRSLVL AGVPHSMRPQ LWMRLSGALQ KKRNSELSYR ENSBTAP00000012674/1-747 TWDKIAVSLP RSEKLRSLVL AGVPHSMRPQ LWMRLSGALQ KKRNSELSYR 651 700 bmy_00985T0/1-540 EIVKDSANDE TVAAKQIEKD LLRTMPSNAC FAHVSSVGVP RLRRVLRALA ENSTTRP00000010907/1-745 EIVKDSANDE TVAAKQIEKD LLRTMPSNAC FAHVSSVGVP RLRRVLRALA ENSP00000248929/1-749 EIVKNSSNDE TIAAKQIEKD LLRTMPSNAC FASMGSIGVP RLRRVLRALA BACU013395/1-1255 EIVKDSANDE TVAAKQIEKD LLRTMPSNAC FAHVSSVGVP RLRRVLRALA ENSBTAP00000012674/1-747 EIVKNSSNDE TIAAKQIEKD LLRTMPSNAC FAHVSGVGVP RLRRVLRALA 701 750 bmy_00985T0/1-540 WLYPEIGYCQ GTGMVAACLL LFLEEEDAFW MMCAIIEDLL PASYFSTTLL ENSTTRP00000010907/1-745 WLYPEIGYCQ GTGMXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000248929/1-749 WLYPEIGYCQ GTGMVAACLL LFLEEEDAFW MMSAIIEDLL PASYFSTTLL BACU013395/1-1255 WLYPEIGYCQ GTGMVAACLL LFLEEEDAFW MMCAIIEDLL PASYFSTTLL ENSBTAP00000012674/1-747 WLYPEIGYCQ GTGMVAACLL LFLEEDDAFW MMCAIIEDLL PASYFSTTLL 751 800 bmy_00985T0/1-540 GVQTDQRLLR HLIVQYLPRL DRLLQEHDIE LSLITLHWFL TAFASVVHIR ENSTTRP00000010907/1-745 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX LSLITLHWFL TAFASVVHIR ENSP00000248929/1-749 GVQTDQRVLR HLIVQYLPRL DKLLQEHDIE LSLITLHWFL TAFASVVDIK BACU013395/1-1255 GVQTDQRLLR HLIVQYLPRL DRLLQEHDIE LSLITLHWFL TAFASVVHIR ENSBTAP00000012674/1-747 GVQTDQRVLR HLIVQYLPRL DRLLQEHDIE LSLITLHWFL TAFASVVHIR 801 850 bmy_00985T0/1-540 LLLRLWDLFF YEGSLVLFQT TLGMLRLKEE ELIQSENSAS IFNTLSDIPS ENSTTRP00000010907/1-745 LLLRLWDLFF YEGSLVLFQA TLGMLRLKEE ELIQSENSAS IFNTLSDIPS ENSP00000248929/1-749 LLLRIWDLFF YEGSRVLFQL TLGMLHLKEE ELIQSENSAS IFNTLSDIPS BACU013395/1-1255 LLLRLWDLFF YEGSLVLFQT TLGMLRLKEE ELIQSENSAS IFNTLSDIPS ENSBTAP00000012674/1-747 LLLRLWDLFF YEGSLVLFQA TLGMLRLKED ELIQSENSAS IFNTLSDIPS 851 900 bmy_00985T0/1-540 QMEDADLLLG EAMRLAGSLT DVAVESQRRK HLAYLLADEG QLLGASPTAN ENSTTRP00000010907/1-745 QMEDADLLLG EAMRLAGSLT DVAVESQRRK HLAYLLADQG QLLGASPTAS ENSP00000248929/1-749 QMEDAELLLG VAMRLAGSLT DVAVETQRRK HLAYLIADQG QLLGAGTLTN BACU013395/1-1255 QMEDADLLLG EAMRLAGSLT DVAVESQRRK HLAYLLADQG QLLGASPTAS ENSBTAP00000012674/1-747 QLEDADLLLA EAMRLAGSLT AVAVETQRRK HLAYLLADQG QLLGAPATTG 901 950 bmy_00985T0/1-540 LSQM------ ---------- --SEEAARVR CR-------- -------LGL ENSTTRP00000010907/1-745 LSQVVRRRTQ RRKSGITSLL FGEDDLEALK AKNIKQTELV ADLREAILRV ENSP00000248929/1-749 LSQVVRRRTQ RRKSTITALL FGEDDLEALK AKNIKQTELV ADLREAILRV BACU013395/1-1255 LSQVVRRRTQ RRKSGITSLL FGEEELEVLK AKNIKQTELV ADLREAILRV ENSBTAP00000012674/1-747 LSQVVRRRTQ RRKSGITSLL FGEDDLEAMK AKNIKQTELV ADLREAILRV 951 1000 bmy_00985T0/1-540 CTEGLCSPSP VLGRHPL--G WAPGAWGRRR PDFPACR--- -------LSA ENSTTRP00000010907/1-745 ARHFQCTDPK NCSV-ELSPD YSMESHQRDH ENYVACLRGH PRRAKALLDF ENSP00000248929/1-749 ARHFQCTDPK NCSV-ELTPD YSMESHQRDH ENYVACSRSH RRRAKALLDF BACU013395/1-1255 ARHFQCTDPK NCSVQELSPD YSMESHQRDH ENYVACSRGH PRRAKALLDF ENSBTAP00000012674/1-747 ARHFQCTDPK NCNV-ELTPD YSMESHQRDH ESYVACSRGH PRRAKALLDF 1001 1050 bmy_00985T0/1-540 AGPSGGSLAS RR-------- -------CSS VRTPRGWPSA GL-------G ENSTTRP00000010907/1-745 ERHDDDELGF RKNDIITIIS QKDEHCWVGE VNGLRGWFPA KFVEVLDERS ENSP00000248929/1-749 ERHDDDELGF RKNDIITIVS QKDEHCWVGE LNGLRGWFPA KFVEVLDERS BACU013395/1-1255 ERHDDDELGF RKNDIITIIS QKDEHCWVGE LNGLRGWFPA KFVEVLDERS ENSBTAP00000012674/1-747 ERHDDDELGF RKNDIITIVS QKDEHCWVGE LNGLRGWFPA KFVEVLDERS 1051 1100 bmy_00985T0/1-540 SESGAAG--A VRPGASGLTR ---------- -----RVDSA L-----PW-- ENSTTRP00000010907/1-745 KEYSIAGDDS VTEGVTDLVR GTLCPALKAL FEHGLKKPSL LGGACHPWLF ENSP00000248929/1-749 KEYSIAGDDS VTEGVTDLVR GTLCPALKAL FEHGLKKPSL LGGACHPWLF BACU013395/1-1255 KEYSIAGDDS VTEGVTDLVR GTLCPALKAL FEHGLKKPSL LGGACHPWLF ENSBTAP00000012674/1-747 KEYSIAGDDA VTEGVTDLVR GTLCPALKAL LEHGLKKPSL LGGACHPWLF 1101 1150 bmy_00985T0/1-540 SRDRAGLGHG RH-------- --CSLGLAGE DD-------- -LEALKAKNI ENSTTRP00000010907/1-745 IEEAAGREVE RDFDSVYSRL VLCKTYRLDE DGKVLTPEEL LYRAVQSVNV ENSP00000248929/1-749 IEEAAGREVE RDFASVYSRL VLCKTFRLDE DGKVLTPEEL LYRAVQSVNV BACU013395/1-1255 IEEAAGREVE RDFDSVYSRL VLCKTYRLDE DGKVLTPEEL LYRAVQSVNV ENSBTAP00000012674/1-747 IEEAAGREVE RDFDSVYSRL VLCKTYRLDE DGKVLTPEEL LYRAVQSVNV 1151 1200 bmy_00985T0/1-540 KQTE------ ------LVAD LREAILRVAR HFQCTD---- ---------- ENSTTRP00000010907/1-745 THDAAHAQMD VKLRSLICVG LNEQVLHLWL EVLCSSLPTV EKWYQPWSFL ENSP00000248929/1-749 THDAVHAQMD VKLRSLICVG LNEQVLHLWL EVLCSSLPTV EKWYQPWSFL BACU013395/1-1255 THDAAHAQMD VKLRSLICVG LNEQVLHLWL EVLCSSLPTV EKWYQPWSFL ENSBTAP00000012674/1-747 THDAAHAQMD VKLRSLICVG LNEQVLHLWL EVLCSSLPTV EKWYQPWSFL 1201 1250 bmy_00985T0/1-540 ------PKNC SVVSLGSQAV HTAHAGALAL FQ----APPC GG-------- ENSTTRP00000010907/1-745 RSPGWVQIKC ELRVLCCFAF SLSQDWELPA KR-EEKQPLK EGVQDMLVKH ENSP00000248929/1-749 RSPGWVQIKC ELRVLCCFAF SLSQDWELPA KR-EAQQPLK EGVRDMLVKH BACU013395/1-1255 RSPGWVQIKC ELRVLCCFAF SLSQDWELPA KREEEKQPLK EGVQDMLVKH ENSBTAP00000012674/1-747 RSPGWVQIKC ELRVLCCFAF SLSQDWELPA KREEEKKPLK EGVQDMLVKH 1251 1300 bmy_00985T0/1-540 -LFCLHSRS ENSTTRP00000010907/1-745 HLFSWDIDG ENSP00000248929/1-749 HLFSWDVDG BACU013395/1-1255 HLFSWDIDG ENSBTAP00000012674/1-747 HLFSWDIDG