KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:32 2014 Check: 00 .. Name: bmy_07209T0/1-381 Len: 397 Check: 77 Weight: 1.00 Name: ENSP00000353132/1-377 Len: 397 Check: 8771 Weight: 1.00 Name: ENSBTAP00000012679/1-379 Len: 397 Check: 6325 Weight: 1.00 Name: BACU019873/1-384 Len: 397 Check: 9321 Weight: 1.00 Name: ENSTTRP00000011291/1-383 Len: 397 Check: 6834 Weight: 1.00 // 1 50 bmy_07209T0/1-381 MQHYGVNGYS LHAMNSLSAM YNLHQQAAQQ AQHAPDYRPS VHALTLAERL ENSP00000353132/1-377 MQHYGVNGYS LHAMNSLSAM YNLHQQAAQQ AQHAPDYRPS VHALTLAERL ENSBTAP00000012679/1-379 MQHYGVNGYS LHAMNSLSAM YNLHQQAAQQ AQHAPDYRPS VHALTLAERL BACU019873/1-384 MQHYGVNGYS LHAMNSLSAM YNLHQQAAQQ AQHAPDYRPS VHALTLAERL ENSTTRP00000011291/1-383 MQHYGVNGYS LHAMNSLSAM YNLHQQAAQQ AQHAPDYRPS VHALTLAERL 51 100 bmy_07209T0/1-381 A------DII LEARYGSQHR KQRRSRTAFT AQQLEALEKT FQKTHYPDVV ENSP00000353132/1-377 A------DII LEARYGSQHR KQRRSRTAFT AQQLEALEKT FQKTHYPDVV ENSBTAP00000012679/1-379 A-GCTFQDII LEARYGSQHR KQRRSRTAFT AQQLEALEKT FQKTHYPDVV BACU019873/1-384 ADGCTFQDII LEARYGSQHR KQRRSRTAFT AQQLEALEKT FQKTHYPDVV ENSTTRP00000011291/1-383 A-GCTFQDII LEARYGSQHR KQRRSRTAFT AQQLEALEKT FQKTHYPDVV 101 150 bmy_07209T0/1-381 MRERLAMCTN LPEARVQPFP MSICDSVVTI SRVNKTLLSH QNQTTTTRKR ENSP00000353132/1-377 MRERLAMCTN LPEARVQVW- ---------- FKNRRAKFRK KQRSLQKEQL ENSBTAP00000012679/1-379 MRERLAMCTN LPEARVQVW- ---------- FKNRRAKFRK KQRSLQKEQL BACU019873/1-384 MRERLAMCTN LPEARVQVW- ---------- FKNRRAKFRK KQRSLQKEQL ENSTTRP00000011291/1-383 MRERLAMCTN LPEARVQVW- ---------- FKNRRAKFRK KQRSLQKEQL 151 200 bmy_07209T0/1-381 KKKKKRKGVS PKSQTWGPWQ SLVLLQEAWV PPSQDSGGCS ALAEMGGYGF ENSP00000353132/1-377 QKQKEAEGSH GEGKAEAPTP DTQLDTEQ-- PPRLPGSDPP AELHLSLSEQ ENSBTAP00000012679/1-379 QKQKEAEGSH GEGKTEAPTP DTQLETDQ-- PPNLPSGDPP AELHLSLSEQ BACU019873/1-384 QKQKEAEASH GEGKTEAPIP DTQLETDQ-- PPSLPSGDPP AELHLSLSEQ ENSTTRP00000011291/1-383 QKQKEAEGSH GEGKTEALTP DTPLEADQ-- PPSLPSGDPP AELHLSLSEQ 201 250 bmy_07209T0/1-381 SQSLSCLQLQ GGGKAE---- -GAPPGRPVP CPESSIL--- -GSLLADSPG ENSP00000353132/1-377 SASESAPEDQ PDREEDPRAG AEDPKAEKSP GADSKGLGCK RGSPKADSPG ENSBTAP00000012679/1-379 SASESAPEDQ PDREEDPQAG AEDPKTEKSP GAESKGLGCK RGSPKADSPG BACU019873/1-384 SASESAPEDQ LDREEDPRAG AADPHTEKSP GAESKGLGCK RGSPKADSPG ENSTTRP00000011291/1-383 SASESAPEDQ PDREEDPRAG AADSKTEKSP GAESKGLGCK RGSPKADSPG 251 300 bmy_07209T0/1-381 SLALAPAAPG GGLLGPSHSY SSSPLSLFRL QEQFRQHMAA TNNLVHYSSF ENSP00000353132/1-377 SLTITPVAPG GGLLGPSHSY SSSPLSLFRL QEQFRQHMAA TNNLVHYSSF ENSBTAP00000012679/1-379 SLALTPAAPG AGLLGPSHSY SSSPLSLFRL QEQFRQHMAA TSNLVHYSSF BACU019873/1-384 SLALAPAAPG GGLLGPSHSY SSSPLSLFRL QEQFRQHVAA TNNLVHYSSF ENSTTRP00000011291/1-383 SLALAPAAPG GGLLGPSHSY SSSPLSLFRL QEQFRQHMAA TNNLVHYSSF 301 350 bmy_07209T0/1-381 EVGGPAPA-A AAAAAAVPYL GVNMAPLGSL HCQSYYQSLS AAAAAHQGVW ENSP00000353132/1-377 EVGGPAPA-A AAAAAAVPYL GVNMAPLGSL HCQSYYQSLS AAAAAHQGVW ENSBTAP00000012679/1-379 EVGGPAPT-- --AAAAVPYL GVNVAPLGSL HCQSYYQSLS AAAAAHQGVW BACU019873/1-384 EVGGPAPAAA AAAAAAVPYL GVNMAPLGSL HCQSYYQSLS AAAAAHQGVW ENSTTRP00000011291/1-383 EVGGPAPAAA AAAAAAVPYL GVNMAPLGSL HCQSYYQSLS AAAAAHQGVW 351 400 bmy_07209T0/1-381 GSPLLPTPPA GLAPASAALN SKTTSIENLR LRAKQHAASL GLDTLPN ENSP00000353132/1-377 GSPLLPAPPA GLAPASATLN SKTTSIENLR LRAKQHAASL GLDTLPN ENSBTAP00000012679/1-379 GSPLLPAPPA GLAPASAALN SKTTSIENLR LRAKQHAASL GLDTLPN BACU019873/1-384 GSPLLPAPPA GLAPASAALN SKTTSIENLR LRAKQHAASL GLDMLPN ENSTTRP00000011291/1-383 GSPLLPAPPA GLAPASAALN SKTTSIENLR LRAKQHAASL GLDTLPN