KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:33 2014 Check: 00 .. Name: ENSP00000422626/1-589 Len: 590 Check: 502 Weight: 1.00 Name: ENSBTAP00000012693/1-578 Len: 590 Check: 2561 Weight: 1.00 Name: ENSTTRP00000004937/1-519 Len: 590 Check: 4155 Weight: 1.00 Name: bmy_11852T0/1-581 Len: 590 Check: 1863 Weight: 1.00 Name: BACU014422/1-581 Len: 590 Check: 739 Weight: 1.00 // 1 50 ENSP00000422626/1-589 MIPNIEGMET ESGNQEKVME EESTEKKKEV EKKKRSRVKQ VLADIAKQVD ENSBTAP00000012693/1-578 -------MEA ESGNKEKAM- EESIEKKKE- EKKKRSRVKQ VLADIVKQVD ENSTTRP00000004937/1-519 ---------- ---------- ---------- ---------- ---------- bmy_11852T0/1-581 -------MET ENGNQEKALE EESTEKKKEV EKKKRSRVKQ VLADIAKQVD BACU014422/1-581 -------MET ESGNQEKALE EESTEKKKEV EKKKRSRVKQ VLADIAKQVD 51 100 ENSP00000422626/1-589 FWFGDANLHK DRFLREQIEK SRDGYVDISL LVSFNKMKKL TTDGKLIARA ENSBTAP00000012693/1-578 FWFGDANLHK DRFLREQIEK SRDGYVDISL LVSFNKMKKL TTDGKLIARA ENSTTRP00000004937/1-519 ---------- ----REQIE- SRDGYVDISL LVSFNKMKKL TTDGKLIARA bmy_11852T0/1-581 FWFGDANLHK DRFLREQIEK SRDGYVDISL LVSFNKMKKL TTDGKLIARA BACU014422/1-581 FWFGDANLHK DRFLREQIEK SRDGYVDISL LVSFNKMKKL TTDGKLIARA 101 150 ENSP00000422626/1-589 LRSSAVVELD LEGTRIRRKK PLGERPKDED ERTVYVELLP KNVNHSWIER ENSBTAP00000012693/1-578 LKSSAVVELD LEGTRIRRKK PLGERPKDED ERTVYVELLP KNVNHSWIER ENSTTRP00000004937/1-519 LKNSAVVELD LEGTRIRRKK PLGERPKDED ERTVYVELLP KNVNHSWIER bmy_11852T0/1-581 LKNSAVVELD LEGTRIRRKK PLGERPKDED ERTVYVELLP KNVNHSWIER BACU014422/1-581 LKNSAVVELD LEGTRIRRKK PLGERPKDED ERTVYVELLP KNVNHSWIER 151 200 ENSP00000422626/1-589 VFGKCGNVVY ISIPHYKSTG DPKGFAFVEF ETKEQAAKAI EFLNNPPEEA ENSBTAP00000012693/1-578 VFGKCGNVVY ISIPHYKSTG DPKGFAFVEF ETKEQAAKAI EFLNNPPEEA ENSTTRP00000004937/1-519 VFGKCGNVVY ISIPHYKSTG DPKGFAFVEF ETKEQAAKAI EFLNNPPEEA bmy_11852T0/1-581 VFGKCGNVVY ISIPHYKSTG DPKGFAFVEF ETKEQAAKAI EFLNNPPEEA BACU014422/1-581 VFGKCGNVVY ISIPHYKSTG DPKGFAFVEF ETKEQAAKAI EFLNNPPEEA 201 250 ENSP00000422626/1-589 PRKPGIFPKT VKNKPIPALR VVEEKKKKKK KKGRMKKEDN IQAKEENMDT ENSBTAP00000012693/1-578 PRKPGVFPKT VKNKPIPALS VTEEKKKKKK KKGRTKKDDN IQTKESNMDA ENSTTRP00000004937/1-519 PRKPGVFPKT VKNKPIPALR VAEEKKKKKK KKGRMKKEDS IQTKESNMDP bmy_11852T0/1-581 PRKPGIFPKT VKNKPIPALR VAEEKKKKKK KKGRMKKEDS IQTKESNMDT BACU014422/1-581 PRKPGIFPKT VKNKPIPALR VAEEKKKKKK KKGRMKKEDS IQTKESNMDT 251 300 ENSP00000422626/1-589 SNTSISKMKR SRPTSEGSDI ESTEPQKQCS KKKKKRDRVE ASSLPEVRTG ENSBTAP00000012693/1-578 SKESGCK-KR SRTTSESSEV EVTEPQKQPT KKKKKREKTE VSSLPLVKAG ENSTTRP00000004937/1-519 SKESVCK-KR SRTTSEGSEV EVTEAQKPPT KKKKKRERTE VSSLPLGKTG bmy_11852T0/1-581 SKESVCK-KR SRTTSEGSEV EVTEPQKPPT KKKKKRERTE VSSLPLGKTG BACU014422/1-581 SKESVCK-KR SRTTSEGSEV EVTEPQKPPT KKKKKRERTE VSSLPLGKTG 301 350 ENSP00000422626/1-589 KRKRSSSEDA ESLAPRSKVK KIIQKD-IIK EASEASKENR DIEISTEEEK ENSBTAP00000012693/1-578 KRKRSGSEDA DCLTPKVKVK KVSQKD-VKK EAPEVCKENK ELEVSTEEEK ENSTTRP00000004937/1-519 KRKRSSSEDA DYLTPKSKLK KVAQKD--IK KASEVCKENK D-EVSTEEEK bmy_11852T0/1-581 KRKRSSSEDA DYLTPKSKLK KVAQKDNIKK EASEVCKENK ELEVSTEEEK BACU014422/1-581 KRKRSSSEDA DYLTPKSKLK KVAQKDNIKK EASEVCKENK ELEVSTEEEK 351 400 ENSP00000422626/1-589 DTGDLKDSSL LKTKRKHKKK HKERHKMGEE VIPLRVLSKS EWMDLKKEYL ENSBTAP00000012693/1-578 DTGDIKDGSL LKAKRKHKKK HKERHKMGEE VIPLRVLSKT EWLDLKKEYL ENSTTRP00000004937/1-519 DTGDIKDGSL LKAKRKHKKK HKERHK-GEE VIPLRVLSKT QWLDLKKEYL bmy_11852T0/1-581 DTGDIKDGSL LKAKRKHKKK HKERHKMGEE VIPLRVLSKT EWLDLKKEYL BACU014422/1-581 DTGDIKDGSL LKAKRKHKKK HKERHKMGEE VIPLRVLSKT EWLDLKKEYL 401 450 ENSP00000422626/1-589 ALQKASMASL KKTISQIKSE SEMETDSGVP QNTGMKNEKT ANREECRTQE ENSBTAP00000012693/1-578 ALQKASMASL KKTISQIKSQ SEMETN-GVP TNSGMKNEKT ANSEECGPQE ENSTTRP00000004937/1-519 ALQKASMASL KKTISQIKLE SEMETNHGVP TKSEMKNEKT -DSEEGGPQE bmy_11852T0/1-581 ALQKASMASL KKTISQIKSE SEMETNLGVP TKSEMKSEKT -DSEEGGPQE BACU014422/1-581 ALQKASMASL KKTISQIKSE SEMETNLGIP TKSEMKSEKT -DSEEGGPQE 451 500 ENSP00000422626/1-589 KVNATGPQFV SGVIVKIIST EPLPGRKQVR DTLAAISEVL YVDLLEGDTE ENSBTAP00000012693/1-578 KVNSAGPQFV SGVIVKIVST EPLPGRKQVR DTLAAISEVV YVDLLEGDTE ENSTTRP00000004937/1-519 KVNAAGPQFV SGVIVKIISA EPLPGRKQVR DTLAVISEVV YVDLLEGDTE bmy_11852T0/1-581 KVNAAGPQFV SGVXVKIIST EPLPGRKQVR DTLAAISEVV YVDLLEGDTE BACU014422/1-581 KVNAAGPQFV SGVIVKIIST EPLPGRKQVR DTLAAISEVV YVDLLEGDTE 501 550 ENSP00000422626/1-589 CHARFKTPED AQAVINAYTE INKKHCWKLE ILSGDHEQRY WQKILVDRQA ENSBTAP00000012693/1-578 CHARFKTPED AQAVVTAHSE IKKKHCWQLE ILSGDHEQRY WQKILVDRQA ENSTTRP00000004937/1-519 CHARFKTPDD AQAVINAYTE IKKKHCWKLE ILSGDHEQRY WQKILVDRQA bmy_11852T0/1-581 CHARFKTPED AQAVINAYTE IKKKHCWKLE ILSGDHEQRY WQKILVDRQA BACU014422/1-581 CHARFKTPED AQAVINAYTE IKKKHCWKLE ILSGDHEQRY WQKILVDRQA 551 600 ENSP00000422626/1-589 KLNQPREKKR GTEKLITKAE KIRLAKTQQA SKHIRFSEYD ENSBTAP00000012693/1-578 KLNQPREKKR GTEKLITKAE KIRLEKTQQA SQHIRFSEYD ENSTTRP00000004937/1-519 KLNQPREKKR GTEKLITKAE KIRLEKTQQA SKHIRFSEYD bmy_11852T0/1-581 KLNQPREKKR GTEKLITKAE KIRLEKTQQA SKHIRFSEYD BACU014422/1-581 KLNQPREKKR GTEKLITKAE KIRLEKTQQA SKHIRFSEYD