KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:39 2014 Check: 00 .. Name: ENSTTRP00000013283/1-350 Len: 360 Check: 5700 Weight: 1.00 Name: BACU020158/1-337 Len: 360 Check: 6717 Weight: 1.00 Name: ENSP00000234313/1-350 Len: 360 Check: 1801 Weight: 1.00 Name: bmy_09589T0/1-331 Len: 360 Check: 9942 Weight: 1.00 Name: ENSBTAP00000012724/1-350 Len: 360 Check: 89 Weight: 1.00 // 1 50 ENSTTRP00000013283/1-350 MEPKRIREGY LVKRGSMFNT WKPMWVVLLE DGVEFYKKKS DNSPKGMIPL BACU020158/1-337 ---------- ---QGSMFNT WKPMWVVLLE DGIEFYKKKS DNSPKGMIPL ENSP00000234313/1-350 MEPKRIREGY LVKKGSVFNT WKPMWVVLLE DGIEFYKKKS DNSPKGMIPL bmy_09589T0/1-331 MEPKRIREGY LVKRGSMFNT WKPMWVVLLE DGIEFYKKKS DNSPKGMIPL ENSBTAP00000012724/1-350 MEPKRIREGY LVKKGSMFNS WKPMWVVLLE DGIEFYKKKS DNSPKGMIPL 51 100 ENSTTRP00000013283/1-350 KGSTLTSPCQ DFGKRMX--- -------XXX XXXXXXXXXX XXXXXXXXXX BACU020158/1-337 KGSTLTSPCQ DFGKRMVRRG RSQESDEICA LSLERMSTFS HQESFLVKTQ ENSP00000234313/1-350 KGSTLTSPCQ DFGKRMF--- -------VFK ITTTKQQDHF FQAAFLEERD bmy_09589T0/1-331 KGSTLTSPCQ DFGKRMF--- -------VFK ITTTKQQGHF FQAAFLEERD ENSBTAP00000012724/1-350 KGSALTSPCQ DFGKRMF--- -------VFK ITTTKQQDHF FQAAFLEERD 101 150 ENSTTRP00000013283/1-350 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXALY LSMKDTEKGV BACU020158/1-337 EELPSL--AV AAGWGGQVIT --------FL ATAVRTNALY LSMKDTEKGV ENSP00000234313/1-350 AWVRDIKKAI KCIEGGQKFA RKSTRRSIRL PETIDLGALY LSMKDTEKGI bmy_09589T0/1-331 AWVRDIKKAI KCIEGGQ--- ---------- ------NALY LSMKDTEKGV ENSBTAP00000012724/1-350 AWVRDIKKAT KCIEGGQKFA RKSTRRSIRL PETIDLSALY LSMKDTEKGV 151 200 ENSTTRP00000013283/1-350 KELNLEKDKK IFNHCFTGNC VIDWLVSNKS VRNRQEGLVV ASSLLNEGYL BACU020158/1-337 KELNLEKDKK IFNHCFTGNC VIDWLVSNQS VRNRQEGLVI ASSLLNEGYL ENSP00000234313/1-350 KELNLEKDKK IFNHCFTGNC VIDWLVSNQS VRNRQEGLMI ASSLLNEGYL bmy_09589T0/1-331 KELNLEKDKK IFNHCFTGNC VIDWLVSNKS VRNRQEGLVI ASSLLNEGYL ENSBTAP00000012724/1-350 KELNLEKDKK IFNHCFTGNC VIDWLVSNKS VRNRQEGLVI ASSLLNEGYL 201 250 ENSTTRP00000013283/1-350 QPAGDLSKYS VDGTAENPFL DNPDAFYYFP DSGFFCEENS SDDDVILKEE BACU020158/1-337 QPAGDLSKNA VDGTAENPFL DNPDAFYYFP DSGFFCEENS SDDDVILKEE ENSP00000234313/1-350 QPAGDMSKSA VDGTAENPFL DNPDAFYYFP DSGFFCEENS SDDDVILKEE bmy_09589T0/1-331 QPAGDLSKNA VDGTAENPFL DNPDAFYYFP DSGFFCEENS SDDDVILKEE ENSBTAP00000012724/1-350 QPAGDLSKNA VDGTAENPFL DNPDAFYYFP DSGFFCEENS SDDDVILKEE 251 300 ENSTTRP00000013283/1-350 FRGVIIKQGC LLKQGHRRKN WKVRKFILRE DPAYLHYYDP AGGEDPLGAI BACU020158/1-337 FRGVIIKQGC LLKQGHRRKN WKVRKFILRE DPAYLHYYDP AGGEDPLGTI ENSP00000234313/1-350 FRGVIIKQGC LLKQGHRRKN WKVRKFILRE DPAYLHYYDP AGAEDPLGAI bmy_09589T0/1-331 FRGVVIKQGC LLKQGHRRKN WKVRKFILRE DPAYLHYYDP AGGEDPLGAI ENSBTAP00000012724/1-350 FRGVIIKQGC LLKQGHRRKN WKVRKFILRE DPAYLHYYDP AGGEDPLGAI 301 350 ENSTTRP00000013283/1-350 RLRGCVVTSV ESNPDGKKSE DENLFEIITA DEVHYFLQAA TPKERTEWIK BACU020158/1-337 RLRGCVVTSV ESNPDGKKSE EENLFEIITA DEVHYFLQAA TPKERTEWIK ENSP00000234313/1-350 HLRGCVVTSV ESNSNGRKSE EENLFEIITA DEVHYFLQAA TPKERTEWIR bmy_09589T0/1-331 RLRGCVVTSV ESNPDGKKSE EENLFEIITA DEVHYFLQAA TPKERTEWIK ENSBTAP00000012724/1-350 RLRGCVVTSV ESHPDGKKSE EENLFEIITA DEVHYFLQAA TPKERIEWIK 351 400 ENSTTRP00000013283/1-350 AIQVAFRTGK BACU020158/1-337 AIQAAFRTGK ENSP00000234313/1-350 AIQMASRTGK bmy_09589T0/1-331 AIQAAFRTGK ENSBTAP00000012724/1-350 AIQVASRTGK