KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:47:41 2014 Check: 00 .. Name: ENSP00000378265/1-537 Len: 537 Check: 239 Weight: 1.00 Name: ENSBTAP00000012761/1-535 Len: 537 Check: 1067 Weight: 1.00 Name: bmy_08956T0/1-479 Len: 537 Check: 9370 Weight: 1.00 Name: ENSTTRP00000009408/1-536 Len: 537 Check: 5994 Weight: 1.00 // 1 50 ENSP00000378265/1-537 MGDEDKRITY EDSEPSTGMN YTPSMHQEAQ EETVMKLKGI DANEPTEGSI ENSBTAP00000012761/1-535 MRNQDKRAAH KDSEPSTEVN HTASSYQGRQ QETGMNLRGI DGNEPTEGSN bmy_08956T0/1-479 MENQDKTINH EDSEPSTEVN HTASRCQEKQ EETVMNPRGK DGNEPTEGSN ENSTTRP00000009408/1-536 MENQDKTIKH EDSEPSTEVN HTASRCQVQQ EETVMNPRGI DGNEPTEGSN 51 100 ENSP00000378265/1-537 LLKSSEKKLQ ETPTEANHVQ RLRQMLACPP HGLLDRVITN VTIIVLLWAV ENSBTAP00000012761/1-535 LLNNNE-KMQ ETPAEPNHLQ RRRQIHACPP RGLLARVITN VTMVILLWAV bmy_08956T0/1-479 LLNSNE-KMQ ETPAEPNHLQ RLRQTFACPP RGLLDRVITN ---------- ENSTTRP00000009408/1-536 LLNSNE-KMQ ETPAEPNHLQ RLRQTFACPP RGLLDRVITN VTMVVLLWAV 101 150 ENSP00000378265/1-537 VWSITGSECL PGGNLFGIII LFYCAIIGGK LLGLIKLPTL PPLPSLLGML ENSBTAP00000012761/1-535 VWSVTGSECL PGGNLFGIIM LFYCAIIGGK LFGLIKLPTL PPLPPLLGML bmy_08956T0/1-479 ---------- ---------- ---------- ---------- -------GML ENSTTRP00000009408/1-536 VWSITGPECL PGGNLFGIII LFYCAIIGGK LLGLIKLPTL PPLPPLLGML 151 200 ENSP00000378265/1-537 LAGFLIRNIP VINDNVQIKH KWSSSLRSIA LSIILVRAGL GLDSKALKKL ENSBTAP00000012761/1-535 LAGFLIRNVP VISDNIQIKH KWSSALRSIA LSVILVRAGL GLDSNALKKL bmy_08956T0/1-479 LAGFLIRNIP VISDNVQIKH KWSSALRSIA LAVILVRAGL GLDSNALKKL ENSTTRP00000009408/1-536 LAGFLIRNIP VISDNVQIQH KWSSALRSIA LAVILVRAGL GLDSNALKKL 201 250 ENSP00000378265/1-537 KGVCVRLSMG PCIVEACTSA LLAHYLLGLP WQWGFILGFV LGAVSPAVVV ENSBTAP00000012761/1-535 KGVCVRLSLG PCLIEACTSA VLAYFLMGLP WQWGFMLGFV LGAVSPAVVV bmy_08956T0/1-479 KSVCVRLSLG PCLVEACASA LLAHFLMGLP WQWGFMLGFV LGAVSPAVVV ENSTTRP00000009408/1-536 KGVCIRLSLG PCLVEACASA LLAHFLMGLP WQWGFMLGFV LGAVSPAVVV 251 300 ENSP00000378265/1-537 PSMLLLQGGG YGVEKGVPTL LMAAGSFDDI LAITGFNTCL GIAFSTGSTV ENSBTAP00000012761/1-535 PSMLLLQEGG YGVEKGIPTL LMAAGSFDDI LAITGFNTCL GMAFSTGSTV bmy_08956T0/1-479 PSMLLLQEGG YGVEKGVPTL LMAAGSFDDI LAITGFNTCL GMAFSTGSTV ENSTTRP00000009408/1-536 PSMLLLQEGG YGVEKGVPTL LMAAGSFDDI LAITGFNTCL GMAFSTGSTV 301 350 ENSP00000378265/1-537 FNVLRGVLEV VIGVATGSVL GFFIQYFPSR DQDKLVCKRT FLVLGLSVLA ENSBTAP00000012761/1-535 FNVLKGVLEV IIGVVTGLVL GFFIQYFPSS DQDKLVWKRA FLVLGLSVLA bmy_08956T0/1-479 FNVLKGVLEV VIGMATGLLL GFFIQYFPSS DQDKLVWKRA FLVLGLSVLA ENSTTRP00000009408/1-536 FNVLKGVLEV VVGMAAGLLL GFFIQYFPSS DQDKLVWKRA FLVLGLSVLA 351 400 ENSP00000378265/1-537 VFSSVHFGFP GSGGLCTLVM AFLAGMGWTS EKAEVEKIIA VAWDIFQPLL ENSBTAP00000012761/1-535 VFSSTYFGFP GSGGLCTLVT AFLAGRGWAS TKTDVEKVIA VAWDIFQPLL bmy_08956T0/1-479 VFSSLYFGFP GSGGLCTLVL AFLAGKGWAS AKADVEKVIA VAWFIFQPLL ENSTTRP00000009408/1-536 VFSSMYFGFP GAGGLCTLVL AFLAGKGWAS AKADVEKVIA VAWFIFQPLL 401 450 ENSP00000378265/1-537 FGLIGAEVSI ASLRPETVGL CVATVGIAVL IRILTTFLMV CFAGFNLKEK ENSBTAP00000012761/1-535 FGLIGAEVLI TALRPETIGL CVATLGIAVL IRILVTYLMV CFAGFNIKEK bmy_08956T0/1-479 FGLIGAEVSI TSLRPETVGL CVATLGIAVL IRILATYLLV CFAGFNFKEK ENSTTRP00000009408/1-536 FGLIGAEVAI TALRPETVGL CIATLGIAVL IRILATYLMV CFAGFNFKEK 451 500 ENSP00000378265/1-537 IFISFAWLPK ATVQAAIGSV ALDTARSHGE KQLEDYGMDV LTVAFLSILI ENSBTAP00000012761/1-535 IFISFAWLPK ATVQAAIGSV ALDTARSHGE KQLEGYGMDV LTVAFLSIII bmy_08956T0/1-479 IFISFAWLPK ATVQAAIGSV ALDTARSHGE KQLEGYGMDV LTVAFLAILI ENSTTRP00000009408/1-536 IFISFAWLPK ATVQAAIGSV ALDTARSHGE KQLEGYGMDV LTVAFLAILI 501 550 ENSP00000378265/1-537 TAPIGSLLIG LLGPRLLQKV EHQNKDEEVQ GETSVQV ENSBTAP00000012761/1-535 TAPVGSLLIG LLGPRLLQKA E-QNKDEEDQ GETSIQV bmy_08956T0/1-479 TAPIGSLLIG LLGPRLLQKA EHQNNDEEDQ GETSIQV ENSTTRP00000009408/1-536 TAPIGSLLIG LLGPRLLQKA EHQNKDEEDE GETSIQV