KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:45 2014 Check: 00 .. Name: ENSP00000393154/1-510 Len: 529 Check: 2239 Weight: 1.00 Name: ENSBTAP00000012776/1-466 Len: 529 Check: 2860 Weight: 1.00 Name: BACU013830/1-409 Len: 529 Check: 6951 Weight: 1.00 Name: bmy_17043T0/1-383 Len: 529 Check: 4309 Weight: 1.00 Name: ENSTTRP00000007287/1-432 Len: 529 Check: 3474 Weight: 1.00 // 1 50 ENSP00000393154/1-510 MATGRGRILQ QHWLGLQTLR GPSRGGGAAR GRARAFGCRK GPGVKLSAGS ENSBTAP00000012776/1-466 ---------- ---------- ---------- ---------- ----MLPAGP BACU013830/1-409 ---------- ---------- ---------- ---------M KLVAGVTVGE bmy_17043T0/1-383 ---------- ---------- ---------- ---------M RVQCASCTGS ENSTTRP00000007287/1-432 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000393154/1-510 AALRCHAGGG QHWESSFSCC SGFLDGMPSE ILLKI--FSY LDAVSLLCTG ENSBTAP00000012776/1-466 AALSRRARQD KVCRRPSTGC SASLDSLPSE VLLKI--LSY LDAAALLCAG BACU013830/1-409 SGFWSAVRGG L--------L SPRQADLPTQ SAAALWSLPL MNPSPGLAEQ bmy_17043T0/1-383 VCLLPSIWRC TASCFLDVSL IPPSLSLPSE ILLKI--LSY LDAVALLCAG ENSTTRP00000007287/1-432 ---------- ---------- -------PSE ILLKI--LSY LDAVALLRA- 101 150 ENSP00000393154/1-510 CVSRRFYHLA ND-------- ---------N FIWIGIYSTA FSPARSNWKF ENSBTAP00000012776/1-466 CVNRRFYHLA ND-------- ---------N FIWIRIYSTA FSPRRSHWRV BACU013830/1-409 TLRK---DKA GPPLGVCGEN RNLPAVELAC FIWIRIYSTA FSPKRSNWKV bmy_17043T0/1-383 CVNRRFYHLA NDKCITVSLR QLTYFLSSXS FIWIRIYSTA FSPKRSNWKV ENSTTRP00000007287/1-432 CVNRRFYHLA ND-------- ---------N FIWIRIYSTA FSPKRSNWKV 151 200 ENSP00000393154/1-510 NSVEKIAMSM SFLSVQDKEA GYWKKEYITK QIASVKAALA DILKPVNPYT ENSBTAP00000012776/1-466 DPAEKTDLSV NLLSAGDKEA GYWKKEYLTK QIASVKAALA RVLKPLHPHT BACU013830/1-409 NSVEKTAVSM NSLSVGDKEA GYWKKEYITK QIASVKAALA RVLKPLHPYT bmy_17043T0/1-383 NSVEKTAVSM NSLSVGDKDA GYWKKEYITK QIASVKAALA RVLKPLHPYT ENSTTRP00000007287/1-432 NSVEKTAVSM NSLSAGDKEA GYWKKEYITK QIASVKAALA RVLKPLHPCT 201 250 ENSP00000393154/1-510 GLPVKTKEAL RIFGLGWAII LKEKGGKEYI MEHVDLSIND TSVTVIWYGK ENSBTAP00000012776/1-466 GLPVKTKEAL RVSGLGWVII LRAADGREYT MEHADLSVND SSVTVVWYGK BACU013830/1-409 GLPVKTKEAL RISGLGWVII LKENSGKEHI LEHVDLSIND SSVTAVWYGK bmy_17043T0/1-383 GLPVKTKEAL RISGLGWVII LKENSGKEHI LEHVDLSIND SSVTAVWYGK ENSTTRP00000007287/1-432 GLPVKTKEAL RISGLGWVII LKENSGKEHI LEHVDLSFND SSVTAMWYGK 251 300 ENSP00000393154/1-510 KWPCLASLST LDLCGMTPVF TDWYKTPTKH RLRWHSLIAK YNLSHLTIST ENSBTAP00000012776/1-466 DWPPLATLST LDLCGATPVF MGQSRTPSRI RPRWHSLITK YQLSQLTESS BACU013830/1-409 DWPRLVTLST LDLCGVTPVF MNRSQTPIKN G--------- ---------- bmy_17043T0/1-383 DWPRLVTLST LDLCGVTPVF MNRSQTPMKN GPRWHSLIAK YNLSHLTKST ENSTTRP00000007287/1-432 DWPRLVTLST LDLCGVTPVF LNRSQTPMKN GPRWHSLIAK YNLSHLTEST 301 350 ENSP00000393154/1-510 MIGCDRLIRI FCLHPGLLVG VWKKEEELAF VMANLHFHHL VERSTLGSAT ENSBTAP00000012776/1-466 AVGGDRLMRV FCLPPGLVVG LWKREEELAF VMANLHLHCL VERSMLGSPA BACU013830/1-409 ---------- ---------- ---------- ---------- ---------- bmy_17043T0/1-383 MLGCDRLIRI FCLHPGLVVG LWKREEELAF VMANLHFHHL VERSTLGSAA ENSTTRP00000007287/1-432 MLGCDRLIRI FCLHPGLVVG LWKREEELAF VMANLHFHHL VERSTLGSAA 351 400 ENSP00000393154/1-510 IPYELPPHSP FLDDSPEYGL HGYQLHVDLH SGGVFYLCGT FRNLFTKRGN ENSBTAP00000012776/1-466 VPYELPPHTP VSDDSPERGL HGYRLHVDMH SGGASCLCGS FHNLSASKGY BACU013830/1-409 -PYELPPHTP LLDDSPERGL SDYQLHVDMH SGGVFCLCGT FHNLSTSKGY bmy_17043T0/1-383 IPYELPPHTP LLDDSPERGL SDYQLHVDMH SGGVFCLCGT FRNLSTSKE- ENSTTRP00000007287/1-432 VPYALPPHSP LSDDSPECGL SGYQLHVDMH SGGVFCLCGT FGNLSTSKEY 401 450 ENSP00000393154/1-510 IENGHVKLIV IHLKNNREHL PLIGKVGLSW KTDIFDGCIK SCSMMDVTLL ENSBTAP00000012776/1-466 LENEYMKLTV ISFKNNTEHL PLIGKVGLSW KTNSFDGCIK SCSIMDLTLL BACU013830/1-409 IENEYMKLSV ISFKNSTEHL PLIGKVGLSW KTNIFDGCIK SCSIMDVTLL bmy_17043T0/1-383 ---------- ---------- ---------W NSK------- ---------- ENSTTRP00000007287/1-432 IENEYMKLSV ISFKNSTEHL PLVGKVGLSW KTNIFDGCIK SCSVMDITLL 451 500 ENSP00000393154/1-510 DEHGKPFWCF SSPVCLRSPA TPSDSSSFLG QTYNVDYVDA EGRVHVELVW ENSBTAP00000012776/1-466 EEYGKPFWCF SSPVCVRCCP GPSDGPSFLG EAYCVDYSDS EGRLHMELVW BACU013830/1-409 EEYGKPFWCF SSPVCMRPSP GPSDGPTFLG ETYRVDYADA EGRVHLELVW bmy_17043T0/1-383 ---------- ---------A GEARGPRFIS E--------- ---------- ENSTTRP00000007287/1-432 EEYGKPFWCF SSPVCMRPSP GPSDGPAFLG ETYHVDYADA EGRVHLELVW 501 550 ENSP00000393154/1-510 IRETEEYLIV NLVLYLSIAK INHWFGTEY ENSBTAP00000012776/1-466 VEETEEYFIV SLALYLRLAK VNQWFGTQY BACU013830/1-409 IEETGEYFIV SLALYLPVAK INHWFGTKY bmy_17043T0/1-383 ---------- -----LRIAP ---WLAP-- ENSTTRP00000007287/1-432 IEEMGEYFIV SLALYLRVAK INHWFGTEH