KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:49 2014 Check: 00 .. Name: ENSTTRP00000011830/1-891 Len: 921 Check: 136 Weight: 1.00 Name: ENSP00000355537/1-894 Len: 921 Check: 2107 Weight: 1.00 Name: ENSBTAP00000012786/1-853 Len: 921 Check: 1141 Weight: 1.00 Name: bmy_10460T0/1-807 Len: 921 Check: 3939 Weight: 1.00 Name: BACU003384/1-880 Len: 921 Check: 550 Weight: 1.00 // 1 50 ENSTTRP00000011830/1-891 MNQIEPGVQY NYVYEDDEYM IQEEEWDRDL LLDPAWEKQQ RKTFTAWCNS ENSP00000355537/1-894 MNQIEPGVQY NYVYDEDEYM IQEEEWDRDL LLDPAWEKQQ RKTFTAWCNS ENSBTAP00000012786/1-853 ---------- ---------- ---------- ---------- -QTFTAWCNS bmy_10460T0/1-807 ---------- ---------- ---------- ----MPPTLC SKTFTAWCNS BACU003384/1-880 ---------- ---------- ---------- ---------- -QTFTAWCNS 51 100 ENSTTRP00000011830/1-891 HLRKAGTQIE NIEEDFRNGL KLMLLLEVIS GERLPKPDRG KMRFHKIANV ENSP00000355537/1-894 HLRKAGTQIE NIEEDFRNGL KLMLLLEVIS GERLPKPDRG KMRFHKIANV ENSBTAP00000012786/1-853 HLRKAGTQIE NIEEDFRNGL KLMLLLEVIS GERLPKPDRG KMRFHKIANV bmy_10460T0/1-807 HLRKAGTQIE NIEEDFRNGL KLMLLLEVIS GERLPKPDRG KMRFHKIANV BACU003384/1-880 HLRKAGTQIE NIEEDFRNGL KLMLLLEVIS GERLPKPDRG KMRFHKIANV 101 150 ENSTTRP00000011830/1-891 NKALDYIASK GVKLVSIGAE EIVDGNVKMT LGMIWTIILR FAIQYVSVEE ENSP00000355537/1-894 NKALDYIASK GVKLVSIGAE EIVDGNVKMT LGMIWTIILR FAIQDISVEE ENSBTAP00000012786/1-853 NKALDYIASK GVKLVSIGAE EIVDGNVKMT LGMIWTIILR FAIQDISVEE bmy_10460T0/1-807 NKALDYIASK GVKLVSIGAE EIVDGNVKMT LGMIWTIILR FAIQDISVEE BACU003384/1-880 NKALDYIASK GVKLVSIGAE EIVDGNVKMT LGMIWTIILR FAIQDISVEE 151 200 ENSTTRP00000011830/1-891 TSAKEGLLLW CQRKTAPYRN VNIQNFHTXX XXXXXXXXXX XXXRPDLIDY ENSP00000355537/1-894 TSAKEGLLLW CQRKTAPYRN VNIQNFHTSW KDGLGLCALI HRHRPDLIDY ENSBTAP00000012786/1-853 TSAKEGLLLW CQRKTAPYRN VNIQNFHTSW KDGLGLCALI HRHRPDLIDY bmy_10460T0/1-807 TSAKEGLLLW CQRKTAPYRN VNIQNFHTSW KDGLGLCALI HRHRPDLIDY BACU003384/1-880 TSAKEGLLLW CQRKTAPYRN VNIQNFHTSW KDGLGLCALI HRHRPDLIDY 201 250 ENSTTRP00000011830/1-891 SKLNKDDPIG NINLAMEIAE KHLDIPKMLD AEDIVNTPKP DERAIMTYVS ENSP00000355537/1-894 SKLNKDDPIG NINLAMEIAE KHLDIPKMLD AEDIVNTPKP DERAIMTYVS ENSBTAP00000012786/1-853 SKLNKDDPIG NINLAMEIAE KHLDIPKMLD AEDIVNTPKP DERAIMTYVS bmy_10460T0/1-807 SKLNKDDPIG NINLAMEIAE KHLDIPKMLD AEDIVNTPKP DERAIMTYVS BACU003384/1-880 SKLNKDDPIG NINLAMEIAE KHLDIPKMLD AEDIVNTPKP DERAIMTYVS 251 300 ENSTTRP00000011830/1-891 CFYHAFAGAE QAETAANRIC KVLAVNQENE RLMEEYERLA SELLE-IQRT ENSP00000355537/1-894 CFYHAFAGAE QAETAANRIC KVLAVNQENE RLMEEYERLA SELLEWIRRT ENSBTAP00000012786/1-853 CFYHAFAGAE QAETAANRIC KVLAVNQENE RLMEEYERLA SELLEWIRRT bmy_10460T0/1-807 CFYHAFAGAE Q--------- ---------- ---------- --LLEWIQRT BACU003384/1-880 CFYHAFAGAE QAETAANRIC KVLAVNQENE RLMEEYERLA SELLAWIQRT 301 350 ENSTTRP00000011830/1-891 IPL--NRTPX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000355537/1-894 IPWLENRTPE KTMQAMQKKL EDFRDYRRKH KPPKVQEKCQ LEINFNTLQT ENSBTAP00000012786/1-853 IPWLENRTPE KTMQAMQKKL EDFRDYRRKH KPPKVQEKCQ LEINFNTLQT bmy_10460T0/1-807 IPWLENRTPE KTMQAMQKKL EDFRDYRRKH KPPKVQEKCQ LEINFNTLQT BACU003384/1-880 IPWLENRTPE KTMQAMQKKL EDFRDYRRKH KPPKVQEKCQ LEINFNTLQT 351 400 ENSTTRP00000011830/1-891 XXXXXXXXXX XXXXXXXXXD IAGAWQRLEQ AEKGYEEWLL NEIRRLERVE ENSP00000355537/1-894 KLRISNRPAF MPSEGKMVSD IAGAWQRLEQ AEKGYEEWLL NEIRRLERLE ENSBTAP00000012786/1-853 KLRISNRPAF MPSEGKMVSD IAGAWQRLEQ AEKGYEEWLL NEIRRLERVE bmy_10460T0/1-807 KLRISNRPAF MPSEGKMVSD IAGAWQRLEQ AEKGYEEWLL NEIRRLERVE BACU003384/1-880 KLRISNRPAF MPSEGKMVSD IAGAWQRLEQ AEKGYEEWLL NEIRRLERVE 401 450 ENSTTRP00000011830/1-891 HLAEKFRQKA STHETWAYGK EQILLQKDYE SASLTEVRAL LRKHEAFESD ENSP00000355537/1-894 HLAEKFRQKA STHETWAYGK EQILLQKDYE SASLTEVRAL LRKHEAFESD ENSBTAP00000012786/1-853 HLAEKFRQKA STHETWAYGK EQILLQKDYE SSTLTEVRAL LRKHEAFESD bmy_10460T0/1-807 HLAEKFRQKA STHETWAYGK EQILLQKDYE SASLTEVRAL LRKHEAFESD BACU003384/1-880 HLAEKFRQKA STHETWAYGK EQILLQKDYE SASLTEVRAL LRKHEAFESD 451 500 ENSTTRP00000011830/1-891 LAAHQDRVEQ IAAIAQELNE LDYHDAVNIN DRCQKICDQW DRLGTLTQKR ENSP00000355537/1-894 LAAHQDRVEQ IAAIAQELNE LDYHDAVNVN DRCQKICDQW DRLGTLTQKR ENSBTAP00000012786/1-853 LAAHQDRVEQ IAAIAQELNE LDYHDAVNVN DRCQKICDQW DRLGTLTQKR bmy_10460T0/1-807 LAAHQDRVEQ IAAIAQELNE LDYHDAVNIN DRCQKICDQW DRLGTLTQKR BACU003384/1-880 LAAHQDRVEQ IAAIAQELNE LDYHDAVNIN DRCQKICDQW DRLGTLTQKR 501 550 ENSTTRP00000011830/1-891 REALEXXEKL LETIDQLHLE FAKRAAPFNN WMEGAMEDLQ DMFIVHSIEE ENSP00000355537/1-894 REALERMEKL LETIDQLHLE FAKRAAPFNN WMEGAMEDLQ DMFIVHSIEE ENSBTAP00000012786/1-853 REALERTEKL LETIDQLHLE FAKRAAPFNN WMEGAMEDLQ DMFIVHSIEE bmy_10460T0/1-807 REALERTEKL LETIDQLHLE FAKRAAPFNN WMEGAMEDLQ DMFIVHSIEE BACU003384/1-880 REALERTEKL LETIDQLHLE FAKRAAPFNN WMEGAMEDLQ DMFIVHSIEE 551 600 ENSTTRP00000011830/1-891 IQSLITAHEQ FKATLPEADS ERQSILAIQN EVEKVIQSYS IRISSSNPYS ENSP00000355537/1-894 IQSLITAHEQ FKATLPEADG ERQSIMAIQN EVEKVIQSYN IRISSSNPYS ENSBTAP00000012786/1-853 IQSLITAHEQ FKATLPEADG ERQSILAIQN EVEKVIQSYS IRISSSNPYS bmy_10460T0/1-807 IQSLITAHEQ FRATLPEADG ERQSILAIQN EVEKVIQSYS IRISSSNPYS BACU003384/1-880 IQSLITAHEQ FRATLPEADG ERQSILAIQN EVEKVIQSYS IRISSSNPYS 601 650 ENSTTRP00000011830/1-891 TVTVDEIRSK WDKVKQLVPI RDQSLQEELA RQHANERLRR QFAAQANAIG ENSP00000355537/1-894 TVTMDELRTK WDKVKQLVPI RDQSLQEELA RQHANERLRR QFAAQANAIG ENSBTAP00000012786/1-853 TVTVDEIRSK WDKVKQLVPI RDQSLQEELA RQHANERLRR QFAAQANAIG bmy_10460T0/1-807 TVTVDEIRSK WDKVKQLVPV RDQSLQEELA RQHANERLRR QFAAQANAIG BACU003384/1-880 TVTVDEIRSK WDKVKQLVPV RDQSLQEELA RQHANERLRR QFAAQANAIG 651 700 ENSTTRP00000011830/1-891 PWIQNKME-- ---------- ---------- -----XXXXX XXXXXXXXXX ENSP00000355537/1-894 PWIQNKME-- ---------- ---------- -----EIARS SIQITGALED ENSBTAP00000012786/1-853 PWIQNKME-- ---------- ---------- -----EIARS SIQITGALED bmy_10460T0/1-807 PWIQNKME-- ---------- ---------- -----EIARS SIQITGALED BACU003384/1-880 PWIQSKMECH ESTIQLAVGL TLDGPWALAA WAPMSEIARS SIQITGALED 701 750 ENSTTRP00000011830/1-891 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXHIRVG ENSP00000355537/1-894 QMNQLKQYEH NIINYKNNID KLEGDHQLIQ EALVFDNKHT NYTMEHIRVG ENSBTAP00000012786/1-853 QMNQLKQYEH NIINYKNNID KLEGDHQLIQ EALVFDNKHT NYTMEHIRVG bmy_10460T0/1-807 QMNQLKQYEH NIINYKNNID KLEGDHQLIQ EALVFDNKHT NYTMEHIRVG BACU003384/1-880 QMNQLKQYEH NIINYKNNID KLEGDHQLIQ EALVFDNKHT NYTMEHIRVG 751 800 ENSTTRP00000011830/1-891 WELLLTTIAR TINEVETQIL MRDAKGITQE QMNEFRASFN HFDRRKNGLM ENSP00000355537/1-894 WELLLTTIAR TINEVETQIL TRDAKGITQE QMNEFRASFN HFDRRKNGLM ENSBTAP00000012786/1-853 WELLLTTIAR TINEVETQIL TRDAKGITQE QMNEFRASFN HFDRRKNGLM bmy_10460T0/1-807 WELLLTTIAR TINEVETQIL MRDAKGITQE QMNEFRASFN HFDR------ BACU003384/1-880 WELLLTTIAR TINEVETQIL MRDAKGITQE QMNEFRASFN HFDRRKNGLM 801 850 ENSTTRP00000011830/1-891 DHEDFRACLI SMGYDLXXXX XXXXXXXXXX XXXXXXXXXS FIDFMTRETA ENSP00000355537/1-894 DHEDFRACLI SMGYDLGEAE FARIMTLVDP NGQGTVTFQS FIDFMTRETA ENSBTAP00000012786/1-853 DHEDFRACLI SMGYDLGEAE FARIMTLVDP NGQGTVTFQS FIDFMTRETA bmy_10460T0/1-807 ---------- ------GEAE FARIMTLVDP NGQGTVTFQS FIDFMTRETA BACU003384/1-880 DHEDFRACLI SMGYDLGEAE FARIMTLVDP NGQGTVTFQS FIDFMTRETA 851 900 ENSTTRP00000011830/1-891 DTDTAEQVIA SFRILASDKP YILAEELRRE LPPDQAQYCI KRMPAYSGPG ENSP00000355537/1-894 DTDTAEQVIA SFRILASDKP YILAEELRRE LPPDQAQYCI KRMPAYSGPG ENSBTAP00000012786/1-853 DTDTAEQVIA SFRILASDKP YILAEELRRE LPPDQAQYCI KRMPAYSGPG bmy_10460T0/1-807 DTDTAEQVIA SFRILASDKP YILAEELRRE LPPDQAQYCI KRMPAYXGPG BACU003384/1-880 DTDTAEQVIA SFRILASDKP YILAEELRRE LPPDQAQYCI KRMPAYSGPG 901 950 ENSTTRP00000011830/1-891 SVPGALDYAA FSSALYGESD L ENSP00000355537/1-894 SVPGALDYAA FSSALYGESD L ENSBTAP00000012786/1-853 SVPGALDYTA FSSALYGESD L bmy_10460T0/1-807 SVPGALDYAA FSSALYGESD L BACU003384/1-880 SVPGALDYAA FSSALYGESD L