KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:59 2014 Check: 00 .. Name: ENSTTRP00000013813/1-769 Len: 831 Check: 8233 Weight: 1.00 Name: bmy_11637T0/1-584 Len: 831 Check: 4410 Weight: 1.00 Name: ENSP00000381298/1-773 Len: 831 Check: 8915 Weight: 1.00 Name: BACU005202/1-373 Len: 831 Check: 5721 Weight: 1.00 Name: ENSBTAP00000012816/1-638 Len: 831 Check: 9207 Weight: 1.00 // 1 50 ENSTTRP00000013813/1-769 MSSPVVARSS QGESQEADPR PRSRGRFWEV GGG-GDRLER AAAESERWEL bmy_11637T0/1-584 ---------- ---------- ---------- ---------- ---------- ENSP00000381298/1-773 MSSPAVARTS PGGSREMAPA PQGRGRFWEV GGGSGHRLER AAAESERWEL BACU005202/1-373 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012816/1-638 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000013813/1-769 LLRRGELLAL GGHXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_11637T0/1-584 ---------- ---------- ---------- ---------- ---------- ENSP00000381298/1-773 LLRRGELLAL GGHLKGALEA FAAALRRGAP ARPECLGALV DCLVFNYRLR BACU005202/1-373 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012816/1-638 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000013813/1-769 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_11637T0/1-584 ---------- ---------- ---------- ---------- ---------- ENSP00000381298/1-773 HGLGWSAAPV AGADGGAGGL LRCLGCRGFL SEPVTVPCGH SYCRRCLRRE BACU005202/1-373 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012816/1-638 ---------- ---------- ---------- --PVTVPCGH SYCRRCLRRE 151 200 ENSTTRP00000013813/1-769 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_11637T0/1-584 ---------- ---------- ---------- ---------- ---------- ENSP00000381298/1-773 LRARCRLCRD RLPPATASAT DAEGTAPRPP PLAAAIAASD FRTSVVLNHL BACU005202/1-373 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012816/1-638 LRARCRLCRD RLPPAAAP-- DAPGTSPRPP P-ATAIAASG FRTSVVLNHL 201 250 ENSTTRP00000013813/1-769 XXKWFPGERE RARAAGGLGE LLHQGRYREA LAAACEELRT --EPSDLTLK bmy_11637T0/1-584 ---------- ---MFSLLKK LTLINPFPPE AGSLCTLLRP CLEPSDLTLK ENSP00000381298/1-773 AEKWFPGQRE RARAAGRLGE LLHQGRYREA LAAACEALRA --EPSDLIVK BACU005202/1-373 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012816/1-638 AEKWFPGQRE RARAAGRLGE LLYQGRYREA LAAACEELRA --EPSDLTLK 251 300 ENSTTRP00000013813/1-769 IYRAESYAGL REFKAAIEDL NAVLFQLPNW PE-------- ---------- bmy_11637T0/1-584 IYRAESYAGL REFKAAIEDL NAILFQLPNW PEGYNWPYCR AGSKLVINGG ENSP00000381298/1-773 IYRAESYAGL QEFKAAIEDL NAVLFQLPDW PE-------- ---------- BACU005202/1-373 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012816/1-638 IYRAESYAGL QEFKAAIEDL NAVLFQLPNW PE-------- ---------- 301 350 ENSTTRP00000013813/1-769 ---------- ---------- ----VYFRKG KVLHDAGFLG DALQLFLQCL bmy_11637T0/1-584 GFSNGKRREN NSIRKSRVYV LLLKVYFRKG KVLHDAGFLG DALQLFLQCL ENSP00000381298/1-773 ---------- ---------- ----VYFRKG KVLCDAGFLG DALQLFLQCL BACU005202/1-373 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012816/1-638 ---------- ---------- ----VYFRKG KVLHDAGFLG DALQLFLQCL 351 400 ENSTTRP00000013813/1-769 ALDEDFAPAK LEVEKILCDL LSPENLKEGL KDSSWSSLPC IKNKPFGFPS bmy_11637T0/1-584 ALDEDFAPAK LEVEKILCDL LSPENLKEGL KDSSWSSLPC IKNKPFGFPS ENSP00000381298/1-773 ALDEDFAPAK LQVQKILCDL LLPENLKEGL KESSWSSLPC TKNRPFDFHS BACU005202/1-373 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012816/1-638 ALDEDFAPAK LEVEKILCDL LSPENLKEGL KDSSWSSLPC IKNKPFSFPS 401 450 ENSTTRP00000013813/1-769 VIEESHCASE LSPEQNEEIA EVTSEPVKGS LNHARSAQAM NSTDMPARED bmy_11637T0/1-584 VIEESHCASE LSPEQNEEIA EVTSETVKGS LNHARSAQAI NSTDMPARED ENSP00000381298/1-773 VMEESQSLNE PSPKQSEEIP EVTSEPVKGS LNRAQSAQSI NSTEMPARED BACU005202/1-373 ---------- ---------- ---------- ---------- ----MPARED ENSBTAP00000012816/1-638 VMEESHSASE LSPEQNEEIA EVTSEPVKGS LNRARSAQAI NSTDMPARED 451 500 ENSTTRP00000013813/1-769 CLI-VSSEFS LSVPQQGVLL -RKLSLLDPD VMVNENGRYT LKRQGXXXXX bmy_11637T0/1-584 CLKRVSSEPS LSVQEKGVLL KRKLSLLDQD VIVNEDGRNK LKRQGETPNE ENSP00000381298/1-773 CLKRVSSEPV LSVQEKGVLL KRKLSLLEQD VIVNEDGRNK LKKQGETPNE BACU005202/1-373 CLKRVSSEPS LSAQEKGVLL KRKLSLLDQD VIVNEDGRNK LKRQGETPNE ENSBTAP00000012816/1-638 CLKRVSSEPS LCIQGKGVLL KRKLSLLDQD VIVNEDGRNK LKRQGEIPTE 501 550 ENSTTRP00000013813/1-769 XXXXXXXXXX XXXXXXXXXX XXXXXXXXLF FEPVTTPCGH SFCKNCLERC bmy_11637T0/1-584 VCTFSLTYGD IPEELIDVAD FECSLCMRLF FEPVTTPCGH SFCKNCLERC ENSP00000381298/1-773 VCMFSLAYGD IPEELIDVSD FECSLCMRLF FEPVTTPCGH SFCKNCLERC BACU005202/1-373 VCTFSLTYGD IPEELIDVSD FECSLCMRLF FEPVTTPCGH SFCKNCLERC ENSBTAP00000012816/1-638 VCTFSLTYGD VPEELIDVSD FECSLCMRLF FEPVTTPCGH SFCKNCLERC 551 600 ENSTTRP00000013813/1-769 LDHTPYCPLC KESLKEYLAD RRYCVTQLLE DLIVKYLPDE LSERKKIYDE bmy_11637T0/1-584 LDHTPYCPLC KESLKEYLAD RRYCVTQLLE DLIVKYLPDE LSERKKIYDE ENSP00000381298/1-773 LDHAPYCPLC KESLKEYLAD RRYCVTQLLE ELIVKYLPDE LSERKKIYDE BACU005202/1-373 LDHTPYCPLC KESLKEYLAD RRYCVTQLLE DLIVKYLPDE LSERKKIYDE ENSBTAP00000012816/1-638 LDHTPYCPLC KESLKEYLAD RRYCVTQLLE DLIVKYLPDE LSERKKIYDE 601 650 ENSTTRP00000013813/1-769 ETAELSHLTK NVPIFVCTMA YPTVPCPLHV FEPRYRLMIR RSIQTGTKQF bmy_11637T0/1-584 ETAELSHLTK NVPXFVCTMA YPTVPCPLHV FEPRYRLMIR RSIQTGTKQF ENSP00000381298/1-773 ETAELSHLTK NVPIFVCTMA YPTVPCPLHV FEPRYRLMIR RSIQTGTKQF BACU005202/1-373 ETAELSHLTK NVPIFVCTMA YPTVPCPLHV FEPRYRLMIR RSIQTGTKQF ENSBTAP00000012816/1-638 ETAELSHLTK NVPIFVCTMA YPTVPCPLHV FEPRYRLMIR RSIQTGTKQF 651 700 ENSTTRP00000013813/1-769 GMCVSDTQNG FADYGCMLQI RNVHFLPDGR SVVDTVGGKR FRVLKRGMKD bmy_11637T0/1-584 GMCVSDTQNG FADYGCMLQI RNVHFLPDGR SVVDTVGGKR FRVLKRGMKD ENSP00000381298/1-773 GMCVSDTQNS FADYGCMLQI RNVHFLPDGR SVVDTVGGKR FRVLKRGMKD BACU005202/1-373 GMCVSDTQNG FADYGCMLQI RNVHFLPDGR SVVDTVGGKR FRVLKRGMKD ENSBTAP00000012816/1-638 GMCVSDTQNS FADYGCMLQI RNVHFLPDGR SVVDTVGGKR FRVLKRGMKD 701 750 ENSTTRP00000013813/1-769 GYCTADIEYL EDVK------ --------VE NEEEIENLRQ LHDLVYSQAC bmy_11637T0/1-584 GYCTADIEYL EDVKGWMGRL DTDTLLTVVE NEDEIENLRQ LHDLVYSQAC ENSP00000381298/1-773 GYCTADIEYL EDVK------ --------VE NEDEIKNLRE LHDLVYSQAC BACU005202/1-373 GYCTADIEYL EDVK------ --------VE NEDEIENLRQ LHNLVYSQAC ENSBTAP00000012816/1-638 GYCTADIEYL EDIK------ --------VE NEDEIENLRQ LHDLVYSQAC 751 800 ENSTTRP00000013813/1-769 SWFQ-LRDRF RSQILQHFGS MPGREENLQA IPNGPAWCWW LLAVLPVDPR bmy_11637T0/1-584 SWFQNLRDRF RSQILQHFGS MPGREENLQV N--------- ---------- ENSP00000381298/1-773 SWFQNLRDRF RSQILQHFGS MPEREENLQA APNGPAWCWW LLAVLPVDPR BACU005202/1-373 SWFQNLRDRF RSQILQHFGS MPGREENLQA IPNGPAWCWW LLAVLPVDPR ENSBTAP00000012816/1-638 SWFQNLRDRF RSQILQHFGS MPGREENLQA IPNGPAWCWW LLAVLPVDPR 801 850 ENSTTRP00000013813/1-769 YQLSVLSMKS LKERLTKIQH ILTYFSRDQS K bmy_11637T0/1-584 -----VKKRS VEESSYRV-- --------EN R ENSP00000381298/1-773 YQLSVLSMKS LKERLTKIQH ILTYFSRDQS K BACU005202/1-373 YQLSVLSMKS LKERLTKIQH ILTYFSRDQS K ENSBTAP00000012816/1-638 YQLSVLSMKS LKERLTKIQH ILTYFSRDQS K