KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:48:12 2014 Check: 00 .. Name: BACU014608/1-481 Len: 484 Check: 8829 Weight: 1.00 Name: bmy_20862T0/1-262 Len: 484 Check: 4697 Weight: 1.00 Name: ENSTTRP00000013743/1-295 Len: 484 Check: 1928 Weight: 1.00 Name: ENSBTAP00000012866/1-295 Len: 484 Check: 2738 Weight: 1.00 // 1 50 BACU014608/1-481 MEELQSRLQE TLDLLSSQEL RSFRDHLRKV EPRVSQVKLE LEGRSPSELA bmy_20862T0/1-262 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013743/1-295 -------MSG ALDVLQMKE- ---------- ---------- ---------- ENSBTAP00000012866/1-295 -------MSG ALDVLQMKE- ---------- ---------- ---------- 51 100 BACU014608/1-481 RLLAKQYYPP AAAKRVLVQD HYDLSGRRKA FLMCVKRNRL GAHQDVLLME bmy_20862T0/1-262 ---------- ---------- ---------- ---------- --------ME ENSTTRP00000013743/1-295 ---------- ---------- -------EDV LKFLAAGTHL GGTNLDFQME ENSBTAP00000012866/1-295 ---------- ---------- -------EDV LKFLAAGTHL GGTNLDFQME 101 150 BACU014608/1-481 DWLGQCQFEN TLCIDPDKME LLGKITSFRD GLNEIKDDIG CCLVALMSHG bmy_20862T0/1-262 KYI------- ---------- ---------- ---------- ---------- ENSTTRP00000013743/1-295 QYI------- ---------- ---------- ---------- ---------- ENSBTAP00000012866/1-295 QYI------- ---------- ---------- ---------- ---------- 151 200 BACU014608/1-481 EEGFIRMKDG -EKVSLEGIF E--MFNNKNC PALQEKPKIF IIQACRGERR bmy_20862T0/1-262 ---YKRKSDG IYIINLKGTW EKLLLEAHAI VAIENPADVS VLSS-----R ENSTTRP00000013743/1-295 ---YKRKSDG IYIINLKRTW EKLLLAARAI VAIENPADVS VISS-----R ENSBTAP00000012866/1-295 ---YKRKSDG IYIINLKRTW EKLLLAARAI VAIENPADVS VISS-----R 201 250 BACU014608/1-481 DSGVETDDEP MDSDDGSEKR RLPTFSDYFI IYPTQADHVA LRDPRTGSVM bmy_20862T0/1-262 NTG------- ---------- ---------- ---------- ---------- ENSTTRP00000013743/1-295 NTG------- ---------- ---------- ---------- ---------- ENSBTAP00000012866/1-295 NTG------- ---------- ---------- ---------- ---------- 251 300 BACU014608/1-481 IKAMTEVFKQ YGNKWHIADF FTKRAVLKFA AATGATPIAG RFTPGTFTNQ bmy_20862T0/1-262 ---------- ---------- --QRAGLKFA AATGATPIAG CFTPGTFTNE ENSTTRP00000013743/1-295 ---------- ---------- --QRAVLKFA AATGATPIAG RFTPGTFTNQ ENSBTAP00000012866/1-295 ---------- ---------- --QRAVLKFA AATGATPIAG RFTPGTFTNQ 301 350 BACU014608/1-481 IQAAFREPRL LVVTDPRADH QPLTEASYVN LPTIALCNTD SPLRYVDIAI bmy_20862T0/1-262 IQAAFREPRL LVVTDPRADH LPLTGASYAN LPTIALCNAD SPLRYVDIAI ENSTTRP00000013743/1-295 IQAAFREPRL LVVTDPRADH QPLTEASYVN LPTIALCNTD SPLRYVDIAI ENSBTAP00000012866/1-295 IQAAFREPRL LVVTDPRADH QPLTEASYVN LPTIALCNTD SPLRYVDIAI 351 400 BACU014608/1-481 PCNNKGAHSV GLMWWMLARE VLRMRGTISR EHPWEVMPDL YFYRDPEEIE bmy_20862T0/1-262 PCNNKGAHSV GLMWWMLARE VLHMRGTISR EHPWEVMPDL YFYRDPEEIE ENSTTRP00000013743/1-295 PCNNKGAHSV GLMWWMLARE VLRMRGTISR EHPWEVMPDL YFYRDPEEIE ENSBTAP00000012866/1-295 PCNNKGAHSV GLMWWMLARE VLRMRGTISR EHPWEVMPDL YFYRDPEEIE 401 450 BACU014608/1-481 KEEQAAAEKA VTKEEFQGEW TAPAPEFTAA QPEVADWSEG VQVPSVPIQQ bmy_20862T0/1-262 NEEQAAAEKA VAKEEFQSEW TAPAPEFTAT QPEVVDWSEG VQVPSVPIQQ ENSTTRP00000013743/1-295 KEEQAAAEKA VTKEEFQGEW TAPAPEFTAA QPEVADWSEG VQVPSVPIQQ ENSBTAP00000012866/1-295 KEEQAAAEKA VTKEEFQGEW TAPAPEFTAA QPEVADWSEG VQVPSVPIQQ 451 500 BACU014608/1-481 FPTEDWSAQP ATEDWSAAPT AQATEWVGTT TEWS bmy_20862T0/1-262 FPTEDWSAQP PTEDWFAAPT ARAIEWVGTT TEWS ENSTTRP00000013743/1-295 FPTEDWSAQP ATEDWSAAPT AQATEWVGTT TEWS ENSBTAP00000012866/1-295 FPTEDWSAQP STEDWSAAPT AQATEWVGTT TEWS