KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:48:13 2014 Check: 00 .. Name: bmy_21455T0/1-140 Len: 140 Check: 4689 Weight: 1.00 Name: BACU014606/1-94 Len: 140 Check: 9993 Weight: 1.00 Name: ENSP00000373261/1-81 Len: 140 Check: 8703 Weight: 1.00 Name: ENSBTAP00000012891/1-81 Len: 140 Check: 8991 Weight: 1.00 // 1 50 bmy_21455T0/1-140 MSQKVVKEGP RLSKNQKFSE HFSIHCCPPF TFLNSKREIV DRNTLRADGK BACU014606/1-94 MSQKVVKEGP RLSKNQKFSE HFSIHCCPPF TFLNSKREIV DRKY-----S ENSP00000373261/1-81 MSQKPAKEGP RLSKNQKYSE HFSIHCCPPF TFLNSKKEIV DRKY-----S ENSBTAP00000012891/1-81 MSQKVVKEGP RLSKNQKFSE HFSIHCCPPF TFLNSKREIV DRKY-----S 51 100 bmy_21455T0/1-140 GCRSEGEIGN KGEGMEIVDR VREARLLHMR LKGGIADALL YRATMILTIE BACU014606/1-94 ICKS-GCFYQ KKEEDWICCA CQKTRSCQTE LGGALG---- ---------H ENSP00000373261/1-81 ICKS-GCFYQ KKEEDWICCA CQKTRL---- ---------- ---------K ENSBTAP00000012891/1-81 ICKS-GCFYQ KKEEDWICCA CQKTRL---- ---------- ---------K 101 150 bmy_21455T0/1-140 KEDQTDPSEE VMEEFQVNGR PQLPDSLLLD PRALGQFIWL BACU014606/1-94 SEMPPYEMRR ---------- ---------- -------MWS ENSP00000373261/1-81 RKIRPTPKKK ---------- ---------- ---------- ENSBTAP00000012891/1-81 RKTKPTPRKK ---------- ---------- ----------