KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:48:15 2014 Check: 00 .. Name: ENSP00000356465/1-225 Len: 226 Check: 625 Weight: 1.00 Name: ENSBTAP00000012905/1-225 Len: 226 Check: 9750 Weight: 1.00 Name: ENSTTRP00000009457/1-224 Len: 226 Check: 5629 Weight: 1.00 Name: bmy_17441T0/1-149 Len: 226 Check: 9735 Weight: 1.00 Name: BACU003672/1-151 Len: 226 Check: 5150 Weight: 1.00 // 1 50 ENSP00000356465/1-225 MAGGGAGDPG LGAAAAPA-P ETREHLFKVL VIGELGVGKT SIIKRYVHQL ENSBTAP00000012905/1-225 MAGGGAGDPG RGAAAAAAPP ETSEHLFKVL VIGELGVGKT SIIKRYVHQL ENSTTRP00000009457/1-224 MAGGGAGDPG RGAAAATV-P ETREHLFKVL VIGELGVGKT SIIKRYVHQL bmy_17441T0/1-149 ---------- ---------- ---------- --------MS SILPVY---- BACU003672/1-151 ---------- ---------- -----VFNLL L--------- -----YLFL- 51 100 ENSP00000356465/1-225 FSQHYRATIG VDFALKVLNW DSRTLVRLQL WDIAGQERFG NMTRVYYKEA ENSBTAP00000012905/1-225 FSQHYRATIG VDFALKVLNW DSRTLVRLQL WDIAGQERFG NMTRVYYKEA ENSTTRP00000009457/1-224 FSQHYRATIG VDFALKVLNW DSRTLVRLQL WDIAGQERFG NMTRVYYKEA bmy_17441T0/1-149 ---------- ---------- ---------- ----GQERFG NMTRVYYKEA BACU003672/1-151 ---------- ---------- ---------- ----GQERFG NMTRVYYKEA 101 150 ENSP00000356465/1-225 VGAFVVFDIS RSSTFEAVLK WKSDLDSKVH LPNGSPIPAV LLANKCDQNK ENSBTAP00000012905/1-225 VGAFIVFDIS RGSTFDAVLK WKSDLDSKVH LPNGSPIPAV LLANKCDQKK ENSTTRP00000009457/1-224 VGAFVVFDIS RGSTFEAVLK WKSDLDSKVH LPNGNPIPAV LLANKCDQKK bmy_17441T0/1-149 VGAFVVFDIS RGSTFEAVLK WKNDLDSKVH LPNGNPIPAV LLANKCDQKK BACU003672/1-151 VGAFVVFDIS RGSTFEAVLK WKNDLDSKVH LPNGNPIPAV LLAKKCDQKK 151 200 ENSP00000356465/1-225 DSSQSPSQVD QFCKEHGFAG WFETSAKDNI NIEEAARFLV EKILVNHQSF ENSBTAP00000012905/1-225 DSGQTPSQMD QFCKEHGFTG WFETSAKDNV NIDEAARFLV ENILANHQSF ENSTTRP00000009457/1-224 DSGQNTPEMD QFCKEHGFTG WFETSAKDNI NIDEASRFLV ENILANHQSF bmy_17441T0/1-149 DSGQNTPQMD QFCKEHGFTG WFETSAKDNI NIDEASRFLV ENILANHQSF BACU003672/1-151 DSGQNTPQMD QFCKEHGFTG WFETSAKDNI NIDEASRFLV ENILANHQSF 201 250 ENSP00000356465/1-225 PNEENDVDKI KLDQETLRAE NKSQCC ENSBTAP00000012905/1-225 PNEEND-GRI KLEEETVKKE SKTQCC ENSTTRP00000009457/1-224 PNEEND-GRI KLDEETVKKE NKSQCC bmy_17441T0/1-149 PNEEND-GRI KLDEETVKKE NKSQCC BACU003672/1-151 PNEEND-GRI KLDEETVKKE NKSQCC