KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:48:16 2014 Check: 00 .. Name: ENSBTAP00000012910/1-702 Len: 717 Check: 2122 Weight: 1.00 Name: ENSP00000297029/1-715 Len: 717 Check: 8983 Weight: 1.00 Name: ENSTTRP00000005613/1-713 Len: 717 Check: 2544 Weight: 1.00 Name: bmy_15008T0/1-410 Len: 717 Check: 6619 Weight: 1.00 Name: BACU000482/1-715 Len: 717 Check: 5868 Weight: 1.00 // 1 50 ENSBTAP00000012910/1-702 MAQGLYHEEF ARAGKRAGLQ VWRIEKLELV PVPESAYGNF YVGDAYLVLH ENSP00000297029/1-715 MARELYHEEF ARAGKQAGLQ VWRIEKLELV PVPQSAHGDF YVGDAYLVLH ENSTTRP00000005613/1-713 MAQGLYHEEF ARAGKQAGLQ VWRIEKLELV AVPESAYGDF YVGDAYLVLH bmy_15008T0/1-410 ---------- ---------- ---------- ---------- ---------- BACU000482/1-715 MAQGLYHEEF ARAGKQAGLQ VWRIEKLELV AVPEGAYGDF YVGDAYLVLH 51 100 ENSBTAP00000012910/1-702 TTQASRGFTY RLHFWLGKEC TQDESTAAAI FTVQMDDYLG GKPVQNRELQ ENSP00000297029/1-715 TAKTSRGFTY HLHFWLGKEC SQDESTAAAI FTVQMDDYLG GKPVQNRELQ ENSTTRP00000005613/1-713 TTQASRGFTY RLHFWLGKEC TQDESAAAAI FTVQMDDYLG GKPVQNRELQ bmy_15008T0/1-410 ---------- ---------- ---------- ---------- ---------- BACU000482/1-715 TTQASRGFTY RLHFWLGKEC TQDESAAAAI FTVQMDDYLG GKPVQNRELQ 101 150 ENSBTAP00000012910/1-702 GYESTDFVGY FKGGLKYKAG GVASGLNHVL TNDLTAQRLL HVKGRRVVRA ENSP00000297029/1-715 GYESNDFVSY FKGGLKYKAG GVASGLNHVL TNDLTAKRLL HVKGRRVVRA ENSTTRP00000005613/1-713 GYESMDFVGY FKGGLKYKAG GVASGFNHVL TNDLTTQRLL HVKGRRVVRA bmy_15008T0/1-410 ---------- ---------- ---------- ---------- ---------- BACU000482/1-715 GYESMDFVGY FKGGLKYKAG GVASGLNHVL TNDLTAQRLL HVKGRRVVRA 151 200 ENSBTAP00000012910/1-702 TEVPLSWDSF NKGDCFIIDL GTVSVMLTW- --RCLEEGKL SSDQIRY--- ENSP00000297029/1-715 TEVPLSWDSF NKGDCFIIDL GT--EIYQWC GSSCNKYERL KANQVATGIR ENSTTRP00000005613/1-713 TEVPLSWDSF NKGDCFIIDL GT--EIYQWC GSSCNKYERL KASQVAIGIR bmy_15008T0/1-410 ---------- ---------- ---------- ---------- ---------- BACU000482/1-715 TEVPLSWDSF NKGDCFIIDL GT--EIYQWC GSSCNKYERL KASQVAIGIR 201 250 ENSBTAP00000012910/1-702 ---------L IRMEEMSEPC HFSWVLGEKP KLRDGEDDDD IKADITNRKM ENSP00000297029/1-715 YNERKGRSEL IVVEEGSEPS ELIKVLGEKP ELPDGGDDDD IIADISNRKM ENSTTRP00000005613/1-713 DNERKGRAQL IVVEDGHESS QLIKVLGQKP ELRDGEEDDD MIADITNRKM bmy_15008T0/1-410 ---------- ---------- ---------- ---------- ---------M BACU000482/1-715 DNERKGRSQL IVVEEGHEPS ELITVLGEKP ELRDGEEDDD IIADITNRKM 251 300 ENSBTAP00000012910/1-702 AKLYMVSDAS GSMKVSLVAE ENPFSMAMLL SEECFILDHG AAKQIFVWKG ENSP00000297029/1-715 AKLYMVSDAS GSMRVTVVAE ENPFSMAMLL SEECFILDHG AAKQIFVWKG ENSTTRP00000005613/1-713 AKLYMVSDAS GSMKLSMVAE ENPFSMAMLL SEECFILDHG AAKQIFVWKG bmy_15008T0/1-410 AKLYMVSDAS GSMKVSMVAE ENPFSMTMLL SEECFILDHG AAKQIFVWKG BACU000482/1-715 AKLYMVSDAS GSMKVSVVAE ENPFSMAMLL SEECFILDHG AAKQIFVWKG 301 350 ENSBTAP00000012910/1-702 KDANPQERKA AMKTAEEFLQ QMNYSTNTQI QVLPEGGETP IFKQFFKDWR ENSP00000297029/1-715 KDANPQERKA AMKTAEEFLQ QMNYSKNTQI QVLPEGGETP IFKQFFKDWR ENSTTRP00000005613/1-713 RDANRQERKA AMKTAEEFLE KMHYSTNTKI QVLPEGGETP IFKQFFKDWR bmy_15008T0/1-410 RDANPQERKA AMKTAEEFLE QMHYSTNTQI QVLPEGGETP IFKQFFKDWR BACU000482/1-715 RDANPQERKA AMKTAEEFLE QMHYSTNTQI QVLPEGGETP IFKQFFKDWR 351 400 ENSBTAP00000012910/1-702 DRDQSDGFGK VYVTEKVAHV KQIPFDASKL HSSPQMAAQH HVVDDGSGKV ENSP00000297029/1-715 DKDQSDGFGK VYVTEKVAQI KQIPFDASKL HSSPQMAAQH NMVDDGSGKV ENSTTRP00000005613/1-713 DKDQSDGFGK VYVTEKVAQI KQIPFDASKL HSSPTMAAQH NMVDDGSGKV bmy_15008T0/1-410 DKDQSDGFGK VYVTEKVAQI KQIPFDXSKL HSSPQMAAQH NMVDDGSGKV BACU000482/1-715 DKDQSDGFGK VYVTEKVAQI KQIPFDASKL HSSPQMAAQH NMVDDGSGKV 401 450 ENSBTAP00000012910/1-702 QIWRVENNGR VEIDRNSYGE FYGGDCYIIL YTYPRGQIIY TWQGANATRD ENSP00000297029/1-715 EIWRVENNGR IQVDQNSYGE FYGGDCYIIL YTYPRGQIIY TWQGANATRD ENSTTRP00000005613/1-713 EIWRVENHGR IEIDRNSYGE FYGGDCYIIL YTYPRGQIIY TWQGANATRD bmy_15008T0/1-410 EIWRXENNGR IEIDRNSYGE FYGGDCYIIL YTYPRGQIIY TWQGANATRD BACU000482/1-715 EIWRVENNGR IGIDRNSYGE FYGGDCYIIL YTYPRGQIIY TWQGANATRD 451 500 ENSBTAP00000012910/1-702 ELTTSAFLTV QLDRSLGGQA VQIRVSQGKE PAHLLSLFKD KPLIIYKNGT ENSP00000297029/1-715 ELTTSAFLTV QLDRSLGGQA VQIRVSQGKE PVHLLSLFKD KPLIIYKNGT ENSTTRP00000005613/1-713 ELTTSAFLTV QLDRSLGGQA VQIRVSQGKE PAHLLSLFKD KPLIIYKNGT bmy_15008T0/1-410 ELTTSAFLTV QLDRSLGGQA VQIRVSQGKE PAHLLSLFKD KPLIIYKNGT BACU000482/1-715 ELTTSAFLTV QLDRSLGGQA VQIRVSQGKE PAHLLSLFKD KPLIIYKNGT 501 550 ENSBTAP00000012910/1-702 SKKEGQAPAP PIRLFQVRRN LASITRIMEV DVDANSLNSN DVFVLKLRQN ENSP00000297029/1-715 SKKGGQAPAP PTRLFQVRRN LASITRIVEV DVDANSLNSN DVFVLKLPQN ENSTTRP00000005613/1-713 SKKGGQVPAP ATRLFQVRRN LASITRIVEV DVDAKSLNSN DVFVLKLRQN bmy_15008T0/1-410 SKKGGQVPAP PTRLFQVRRN LASITRIVEV DVDAKSLNSN DAFVLKLRQN BACU000482/1-715 SKKGGQVPAP PTRLFQVRRN LASITRIVEV DVDAKSLNSN DAFVLKLRQN 551 600 ENSBTAP00000012910/1-702 NGYIWIGKGS TQEEEKGAEY VASVLKCKTS TIQEGKEPEE FWNSLGGKKD ENSP00000297029/1-715 SGYIWVGKGA SQEEEKGAEY VASVLKCKTL RIQEGEEPEE FWNSLGGKKD ENSTTRP00000005613/1-713 NGYIWRGKGV SQEEN-GAAY VASVLKCKTT RIQEA-ESEE FWNSLGGKKD bmy_15008T0/1-410 NGYIWRGKGA SQEEEKGAEY VASVLKCKTT RIQEGEEPEE FWNSLGGKKD BACU000482/1-715 NGYIWRGKGA SQEEEKGAEY VASVLKCKTM RIQEGEEPEE FWNSLGGKKD 601 650 ENSBTAP00000012910/1-702 YQTSPLLESQ AEDHPPRLYG CSNKTGRFII EEVPGEFTQD DLAEDDVMLL ENSP00000297029/1-715 YQTSPLLETQ AEDHPPRLYG CSNKTGRFVI EEIPGEFTQD DLAEDDVMLL ENSTTRP00000005613/1-713 YQTSPLLETQ AEDHPPRLYA CSNKTGRFIV EEVPGEFTQD DLAEDDVMLL bmy_15008T0/1-410 YQTSPLLETQ AEDHPPRLYA CSNKTGRFFV EEVPGEFTQD DLAEDDVMLL BACU000482/1-715 YQTSPLLETQ AEDHPPRLYA CSNKTGRFFV EEVPGEFTQD DLAEDDVMLL 651 700 ENSBTAP00000012910/1-702 DAWEQIFIWI GKDANEVEKS ESLKSAKIYL ETDPSGRDKR TPIVIIKQGH ENSP00000297029/1-715 DAWEQIFIWI GKDANEVEKK ESLKSAKMYL ETDPSGRDKR TPIVIIKQGH ENSTTRP00000005613/1-713 DAWEQXXXXX XXXXXXXXXX XXXXXXKIYL ETDPSGRDKR TPIVIIKQGH bmy_15008T0/1-410 DAWEQI---- ---------- ---------- ---------- --------GH BACU000482/1-715 DAWEQIFIWI GKDANEVERS ESLKSAKIYL ETDPSGRDKG TPIVIIKQGH 701 750 ENSBTAP00000012910/1-702 EPPTFTGWFL GWDSSRW ENSP00000297029/1-715 EPPTFTGWFL GWDSSKW ENSTTRP00000005613/1-713 EPSTFTGWFL GWDSSRW bmy_15008T0/1-410 E--------- ------- BACU000482/1-715 EPSTFTGWFL GWDSSRW