KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:48:17 2014 Check: 00 .. Name: bmy_05745T0/1-378 Len: 1089 Check: 4395 Weight: 1.00 Name: BACU010547/1-1012 Len: 1089 Check: 2093 Weight: 1.00 Name: ENSP00000257552/1-362 Len: 1089 Check: 64 Weight: 1.00 Name: ENSBTAP00000012926/1-342 Len: 1089 Check: 8007 Weight: 1.00 Name: ENSTTRP00000005346/1-342 Len: 1089 Check: 7912 Weight: 1.00 // 1 50 bmy_05745T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU010547/1-1012 MGGAAAPRSR PASGXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000257552/1-362 METDAPQPGL ASPDSPHDPC KM-------- ---------- ---------- ENSBTAP00000012926/1-342 ---------- ---------- KM-------- ---------- ---------- ENSTTRP00000005346/1-342 ---------- ---------- KM-------- ---------- ---------- 51 100 bmy_05745T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU010547/1-1012 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000257552/1-362 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012926/1-342 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005346/1-342 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_05745T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU010547/1-1012 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000257552/1-362 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012926/1-342 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005346/1-342 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_05745T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU010547/1-1012 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000257552/1-362 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012926/1-342 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005346/1-342 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_05745T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU010547/1-1012 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000257552/1-362 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012926/1-342 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005346/1-342 ---------- ---------- ---------- ---------- ---------- 251 300 bmy_05745T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU010547/1-1012 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000257552/1-362 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012926/1-342 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005346/1-342 ---------- ---------- ---------- ---------- ---------- 301 350 bmy_05745T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU010547/1-1012 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000257552/1-362 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012926/1-342 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005346/1-342 ---------- ---------- ---------- ---------- ---------- 351 400 bmy_05745T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU010547/1-1012 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000257552/1-362 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012926/1-342 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005346/1-342 ---------- ---------- ---------- ---------- ---------- 401 450 bmy_05745T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU010547/1-1012 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000257552/1-362 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012926/1-342 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005346/1-342 ---------- ---------- ---------- ---------- ---------- 451 500 bmy_05745T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU010547/1-1012 XXXXXXXXXX XXXXXXXXXX XXGAAPGAAG TRPEPPPLQP SSALGFLGPP ENSP00000257552/1-362 ---------- ---------- ---------- ---------- -----FIG-- ENSBTAP00000012926/1-342 ---------- ---------- ---------- ---------- -----FIG-- ENSTTRP00000005346/1-342 ---------- ---------- ---------- ---------- -----FIE-- 501 550 bmy_05745T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU010547/1-1012 VGARRLHGSR VRTGGGGSGG ERAACLARGR PGRAGVTGGK GRGKGGRARG ENSP00000257552/1-362 ---------- ---------- ---------- ---------- ---------G ENSBTAP00000012926/1-342 ---------- ---------- ---------- ---------- ---------G ENSTTRP00000005346/1-342 ---------- ---------- ---------- ---------- ---------G 551 600 bmy_05745T0/1-378 ---------- ---------- -------MLM FDKTTNRHRE ---------- BACU010547/1-1012 AGWSEGGCVV TEGLREYFGQ FGEVKECLVM RDPLTKRSRG FGFVTFMDQA ENSP00000257552/1-362 LSWQ----TT QEGLREYFGQ FGEVKECLVM RDPLTKRSRG FGFVTFMDQA ENSBTAP00000012926/1-342 LSWQ----TT QEGLREYFGQ FGEVKECLVM RDPLTKRSRG FGFVTFMDQA ENSTTRP00000005346/1-342 LSWQ----TT QEGLREYFGQ FGEVKECLVM RDPLTKRSRG FGFVTFMDQA 601 650 bmy_05745T0/1-378 --TCRIADTR EEQRSRPLLP LQLSPPPPPQ P--------- --------VS BACU010547/1-1012 GVDKVLAQSR HELDSKTIDP -KVAFPRRAQ PKMVTRTKKI FVGGLSVNTT ENSP00000257552/1-362 GVDKVLAQSR HELDSKTIDP -KVAFPRRAQ PKMVTRTKKI FVGGLSVNTT ENSBTAP00000012926/1-342 GVDKVLAQSR HELDSKTIDP -KVAFPRRAQ PKMVTRTKKI FVGGLSVNTT ENSTTRP00000005346/1-342 GVDKVLAQSR HELDSKTIDP -KVAFPRRAQ PKMVTRTKKI FVGGLSVNTT 651 700 bmy_05745T0/1-378 AQPVSAW--- ------AYLV --------PG FGFVTFESED IVEKVCEIHF BACU010547/1-1012 VEDVKQYFEQ FGKVDDAMLM FDKTTNRHRG FGFVTFESED IVEKVCEIHF ENSP00000257552/1-362 VEDVKQYFEQ FGKVDDAMLM FDKTTNRHRG FGFVTFESED IVEKVCEIHF ENSBTAP00000012926/1-342 VEDVKQYFEQ FGKVDDAMLM FDKTTNRHRG FGFVTFESED IVEKVCEIHF ENSTTRP00000005346/1-342 VEDVKQYFEQ FGKVDDAMLM FDKTTNRHRG FGFVTFESED IVEKVCEIHF 701 750 bmy_05745T0/1-378 HEINNKMVEC KKAQPKEVMS PTGSARGRSR VMPYGMDAFM LGIGMLGYPG BACU010547/1-1012 HEINNKMVEC KKAQPKEVMS PTGSARGRSR VMPYGMDAFM LGIGMLGYPG ENSP00000257552/1-362 HEINNKMVEC KKAQPKEVMS PTGSARGRSR VMPYGMDAFM LGIGMLGYPG ENSBTAP00000012926/1-342 HEINNKMVEC KKAQPKEVMS PTGSARGRSR VMPYGMDAFM LGIGMLGYPG ENSTTRP00000005346/1-342 HEINNKMVEC KKAQPKEVMS PTGSARGRSR VMPYGMDAFM LGIGMLGYPG 751 800 bmy_05745T0/1-378 FQATTYASRS YTGLAPGYTY QFPEFRVERT PLPSAPVLPE LTGQSLGFRT BACU010547/1-1012 FQATTYASRS YTGLAPGYTY QFPEFRVERT PLPSAPVLPE LT-------- ENSP00000257552/1-362 FQATTYASRS YTGLAPGYTY QFPEFRVERT PLPSAPVLPE LT-------- ENSBTAP00000012926/1-342 FQATTYASRS YTGLAPGYTY QFPEFRVERT PLPSAPVLPE LT-------- ENSTTRP00000005346/1-342 FQATTYASRS YTGLAPGYTY QFPEFRVERT PLPSAPVLPE LT-------- 801 850 bmy_05745T0/1-378 PHRPHGEKEN DPGTFPGKAS GTLFSCPPVY EDAADSGTGH HHAEAPIPFL BACU010547/1-1012 ---------- ---------- ---------- ---------- ---------- ENSP00000257552/1-362 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012926/1-342 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005346/1-342 ---------- ---------- ---------- ---------- ---------- 851 900 bmy_05745T0/1-378 PAIPLTAYGP MAAAAAAAAV VRGT------ -----GSTPS RTGGFLGTTS BACU010547/1-1012 -AIPLTAYGP MAAAAAAAAV VRGT------ -----GSTPS RTGGFLGTTS ENSP00000257552/1-362 -AIPLTAYGP MAAAAAAAAV VRGTGSHPWT MAPPPGSTPS RTGGFLGTTS ENSBTAP00000012926/1-342 -AIPLTAYGP MAAAAAAAAV VRGTGSHPWT MAPPPGSTPS RTGGFLGTTS ENSTTRP00000005346/1-342 -AIPLTAYGP MAAAAAAAAV VRGTXXXXXX XXXXXXXXXX XXXXXXXXXX 901 950 bmy_05745T0/1-378 PGPMAELYGA ANQDSGVSSY ISAASPAPST GFGHSLGGPL IATAFTNGFV BACU010547/1-1012 PGPMAELYGA ANQDSGVSSY ISAASPAPST GFGHSLGSGL ------HGFC ENSP00000257552/1-362 PGPMAELYGA ANQDSGVSSY ISAASPAPST GFGHSLGGPL IATAFTNGYH ENSBTAP00000012926/1-342 PGPMAELYGA ANQDSGVSSY ISAASPAPST GFGHSLGGPL IATAFTNGYH ENSTTRP00000005346/1-342 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXGPL IATAFTNGYH 951 1000 bmy_05745T0/1-378 NVKPQAAGGK GPGAPPHQLR TKCLCGCGPL ASSLQPWRGQ GC-------- BACU010547/1-1012 PEPPLGAAQS GISPRALWQF RGMIKCAMPS SKPLMDFNNY GCYCGLGGSG ENSP00000257552/1-362 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012926/1-342 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005346/1-342 ---------- ---------- ---------- ---------- ---------- 1001 1050 bmy_05745T0/1-378 --VGQAEPLE PSRPVSYVNT VR-------- ---------- ---------- BACU010547/1-1012 TPVDELDTCC QTHDNCYLEA KKLDSCTFLL DNPYTESYSY SCSNTEITCN ENSP00000257552/1-362 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012926/1-342 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005346/1-342 ---------- ---------- ---------- ---------- ---------- 1051 1100 bmy_05745T0/1-378 ---------- ---------- ---------- --------- BACU010547/1-1012 SKNDACEAFI CNCDRTAAIC FSKVPYNKQH KDLDTKKYC ENSP00000257552/1-362 ---------- ---------- ---------- --------- ENSBTAP00000012926/1-342 ---------- ---------- ---------- --------- ENSTTRP00000005346/1-342 ---------- ---------- ---------- ---------