KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:48:21 2014 Check: 00 .. Name: ENSP00000401597/1-781 Len: 920 Check: 4710 Weight: 1.00 Name: ENSBTAP00000012967/1-781 Len: 920 Check: 690 Weight: 1.00 Name: ENSTTRP00000011153/1-608 Len: 920 Check: 6799 Weight: 1.00 Name: bmy_19144T0/1-415 Len: 920 Check: 1790 Weight: 1.00 Name: BACU007653/1-920 Len: 920 Check: 649 Weight: 1.00 // 1 50 ENSP00000401597/1-781 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012967/1-781 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011153/1-608 ---------- ---------- ---------- ---------- ---------- bmy_19144T0/1-415 ---------- ---------- ---------- ---------- ---------- BACU007653/1-920 MDTEDIGSGK LGQILKQIWR QNLMLKQALL GEDHCEGAGG ATWIATVVFL 51 100 ENSP00000401597/1-781 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000012967/1-781 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011153/1-608 ---------- ---------- ---------- ---------- ---------- bmy_19144T0/1-415 ---------- ---------- ---------- ---------- ---------M BACU007653/1-920 GQELSGALHQ LLEHTAGTLR STCQQLYVLL DKENHCTWRQ EIIAFIDCLM 101 150 ENSP00000401597/1-781 ---------- ---------- -----MHDEC TPQQTMSSIQ DTKAADIAAR ENSBTAP00000012967/1-781 ---------- ---------- -----MHDEC TPLQTKSTIQ DIKATDIAAR ENSTTRP00000011153/1-608 ---------- ---------- -----LY--- ---------- ---------- bmy_19144T0/1-415 KRSEYLGSTA TFLKKEEKEM CNLCGMHDEC TPLQTMSAIQ DIKATDIAAR BACU007653/1-920 KRSEYLGSTA TFLKKEEKEI YNLCGMHDEC TPLKTMSAIQ DIKATDIAAR 151 200 ENSP00000401597/1-781 GELNVIETAT VSPTNGEESH YTNQVQLEKN KTHMSSALVE KENNTSLNGR ENSBTAP00000012967/1-781 GEQNVIETAT VSPTNGEESH YTNQVQLKKN KIHKSSELVE KENNTSLNGD ENSTTRP00000011153/1-608 ---------- ---------- ---------- ---------- ---------- bmy_19144T0/1-415 GEQNVIETAT VSPTNGEESH YTNQVQLKKN KIHRSSELVG KENNTSLKGD BACU007653/1-920 EEQNVIETAT VSPTNGEERH YTNQVQLKKN KIHRSSELVG KENNTSLKGD 201 250 ENSP00000401597/1-781 VLGQEESQNK MFPDNAENED DKQIEHMTVE NINGNREETH GIIQTTETEI ENSBTAP00000012967/1-781 VTGQEESQNK MFPDNAENKD DKQIEHMTIE SINGNREELH DIIQTTEREI ENSTTRP00000011153/1-608 ---------- ---------- ---------- ---------- ---------- bmy_19144T0/1-415 VTGQEESQNK MFPDNAEHED DKQIEHMTIE NINGNREETH DIIQTREREI BACU007653/1-920 VTGQEESQNK IFPDSAGNED DKQIEHMTIE NINGNREETH DIIQTREREI 251 300 ENSP00000401597/1-781 QETSESPREE MTTSSIICDI SKKYINSTLP NDSENIKHKN NIMEKEYLDV ENSBTAP00000012967/1-781 QEISESQREE ITTSSITCDS SNKCVNS-LP SDSESLKQKN NIMEKEYLDV ENSTTRP00000011153/1-608 ---------- ---------- ---------- ---------- --LETRYLDV bmy_19144T0/1-415 QETSESQSEE ITTSSTTCDI SSKYVNSPLP ---------- ---------- BACU007653/1-920 QETSESQSEE ITTSSTTCDI SSKYVNSPLP SDSETLKQKN NIMEKEYLDV 301 350 ENSP00000401597/1-781 LSDVTGPQVS CYITAPSYVL QQLECRIINH MSSLIVGDNE ELVSNVITIE ENSBTAP00000012967/1-781 LSDDTVPQVS CYITAPAYVL QHLQCRITNS MSSLIVSENE ELVSNVITVE ENSTTRP00000011153/1-608 LSDDTVTQVS CYITAPSYVL QHLECRIINN MSSLIVSDNE ELVSNVITVE bmy_19144T0/1-415 ---------- ----TPSYVL QHLECRIINN MSSLIVSDNE ELVSNVITVE BACU007653/1-920 LSDDTLTQVS CYITAPSYVL QHLECRIINN MSSLIVSDNE ELVSNVITVE 351 400 ENSP00000401597/1-781 CSDKEKRVPF PIGIAIPFTA RYRGNYRDIM VKVCDINLQS SYLNPNSLEG ENSBTAP00000012967/1-781 CSDMEKRIPF PICIAIPFTA RYRGNYRDIM VKVSDINLRS SYLTPNSLEG ENSTTRP00000011153/1-608 CSDMEKRIPF PICIAIPFTE HYRGNYRDIM VKVSDVDLQS SYLTPNSLEG bmy_19144T0/1-415 CSDMEKRIPF PICIAIPFTA RYRGNYRDIM VKVSDVDLQA SYLTPNSLEG BACU007653/1-920 CSHKEKRIPF PICIAIPFTA RYRGNYRDIM VKVSDVDLQA NYLTPNSLEG 401 450 ENSP00000401597/1-781 MKGGYKGTCA SVKVYKLGIF SVVSCLKKES FTVTKKGLAL KSSMDSRISL ENSBTAP00000012967/1-781 KTGSYKGTCA EVKVYKLGIF SVMSCLKKES FTVTKKGLTH KTTMDSRISL ENSTTRP00000011153/1-608 MRGSYKVTCA EVKVYKLGIF SVVSCLKKES LTVTKKGLTL KPSMDSQISL bmy_19144T0/1-415 MRGSYKVTCA EVKVYKLGIF SVVSCLKKES FTVTKKGLTL KPSMDSRISL BACU007653/1-920 MRGSYKVTCA EVKVYKLGIF SVVSCLKKES FTVTKKGLTL KPSMDSRISL 451 500 ENSP00000401597/1-781 NYPPGVFTSP VLVQLKIQPV DPALVAHLKA QQDTFYSVQS TSPLIHIQHP ENSBTAP00000012967/1-781 NYPLGVFNSP VLVQIKVQPI EPSLVAYLKT QQETSYSVLS TSPMIHVQHP ENSTTRP00000011153/1-608 NYPPGVFSSP VLVQLKVQPI DPSLVAYLKT QQDTSYSVLS TSPLIHVQHP bmy_19144T0/1-415 NYPPGVFSSP VLVQLKVQPI DPSLVAYLKT QQDTSYSVLS TSPLIHVQHP BACU007653/1-920 NYPPGVFSSP VLVQLKVQPI DPSLVAYLKT QKDTSYSVLS TSPLIHVQHP 501 550 ENSP00000401597/1-781 STYPFQKPVT LFLPCSPYLD KNNLGSEIDH KRRASATINR ITPSYFNRTK ENSBTAP00000012967/1-781 STHSFQKPVT VLLPCSPHPD KKNLGSEIDH KRTASTTTNR IIPLYFNRTK ENSTTRP00000011153/1-608 STHLFQKPIT VLLPCSTHPD KKNLGSEIDH KRTASATTNR IIPLYLNWTK bmy_19144T0/1-415 STHLFQKPIT VFLPCSPHPD KKNLGSEIDH KRTASATTNR IIPLYLN--- BACU007653/1-920 STHLFQKPIT VFLPCSPHPG KKNLRSEIDH KRTASATTNR IIPLYLNGTK 551 600 ENSP00000401597/1-781 IASIRKPRKN ASECLKLLGF RSQDSGWCGL DD-VVKTIQS GLVSVELYEH ENSBTAP00000012967/1-781 STSIRKPRNN ACESLKLLGF KSRESGWFVL DDVVVRSVQS GLISFELCEH ENSTTRP00000011153/1-608 STSIRKPGSN ACESLKLLGF RSQDSGWFVL DGFAVRTMQS GLISFELCEH bmy_19144T0/1-415 ---------- ---------- ---------- ---------- ---------- BACU007653/1-920 STSIRKPGNN ACESLKLLGF RSRDSGWFVL DGVVVRTVQS GLISFELCEH 601 650 ENSP00000401597/1-781 LERFIVLHLS STMDNSHLVT FVKSLEEAML STTACIVLSH QKDNPHRIAV ENSBTAP00000012967/1-781 LERFIVLHSS SSVDNGHLVS FVKSLEEAMF STTACVILYY QKDNPHRIVI ENSTTRP00000011153/1-608 LEKFIVLHPS SIVDNSHLVS FVKSLEEATL SITVCIVLYH QKDNPHRTVI bmy_19144T0/1-415 ---------- ---------- ---------- ---------- ---------- BACU007653/1-920 LERFILLQLS SIVDNSYLVS FVKSLEETML STTVCIVLYH QKDNPHRIII 651 700 ENSP00000401597/1-781 LVVPSKDLSQ VLKDLHLEGF GGPPEPSRHF QVREGEQLLL RFTGNIFASS ENSBTAP00000012967/1-781 LVVPSKDLYQ VLGNLRSEAS SGPPEPSRHF QVKEGELLLL RFTGNIFASS ENSTTRP00000011153/1-608 LVVPSKDLHQ VLRNLRLEAS SGPPEPSRHF QVKEGEQLLL RFTGNIFASS bmy_19144T0/1-415 ---------- ---------- ---------- ---------- ---------- BACU007653/1-920 LVVPSKDLHQ VLRNLHLEAC SGPPEPSRHF QVKEGEQLLL RFTGNIFASS 701 750 ENSP00000401597/1-781 NGKDYGKDYT LIFHLQRKPR LELQIKEVDE FGNYSCPHYK GTIVVYKVPK ENSBTAP00000012967/1-781 NGKDYGKDYK LIFHLQRTPR LELQIKEVDE FGNYSCPHYK GAIVVYKVPK ENSTTRP00000011153/1-608 NGKDYGKDYK LIFHLQRKPR LELQIKEVDE LGNYSCPHYK GTIVVYKVPK bmy_19144T0/1-415 ---------- ---------- ---------- ---------- ---------- BACU007653/1-920 NGKDYGKDYK LIFHLQRKPR LELQIKEVDE FGNYSCPHYK GTIVVHKVPK 751 800 ENSP00000401597/1-781 GKIVPNLNQS LVINENHSQL PICKLPLKLP KHKKLINRPQ STKRVSKDPV ENSBTAP00000012967/1-781 EKIVRNLDES LIFNENNYQL PICKLALRLP KHEKLINRPQ STKRISTDPL ENSTTRP00000011153/1-608 EKIVHNLDQS LILNENNYQL PICKLPLKLP KXXXXXXXXX XXXXXXXXXX bmy_19144T0/1-415 ---------- ---------- ---------- ---------- ---------- BACU007653/1-920 EKIVHNLDQS LVLNENNDQL PICKLPLKLP KHEKLINRPQ STKRISTDPL 801 850 ENSP00000401597/1-781 EALWDNLLHW LAEELSEENA ESLSSTLPLR RSTIQLIKLK NPDDLTEQIH ENSBTAP00000012967/1-781 EALWDNLLYW LADELSEENA LCLSSSLPLR RSTIQLIKLK NPDDLTEQTH ENSTTRP00000011153/1-608 XALWDNLLYW LADELSEENA LCLFSSLPLR HSTIQLIKLK NPDDLTDQTH bmy_19144T0/1-415 ---------- ---------- ---------- ---------- ---------- BACU007653/1-920 EALWDNLLYW LADELSEENA LCLSSSLPLR RSTIQLIKLK NPDDLTEQTH 851 900 ENSP00000401597/1-781 EFLCFWKKSL PTFTDKLRLL ARHLRKIGRS DLAEELKFKW ENKVFTEPQQ ENSBTAP00000012967/1-781 ELLCFWKRSL PNSTDKLRLL ARHLRKIGRN DLAEELKFKW ENKVFTEPQQ ENSTTRP00000011153/1-608 DLLCFWKRSL PNSTDKLRLL ARHLHKISRS DLAEELKFKW ENKVFTEP-- bmy_19144T0/1-415 ---------- ---------- ---------- ---------- ---------- BACU007653/1-920 ELLCFWKRSL PNSTDKLRLL ARHLRKIGRS DLAEELKFKW ENKVFTEPQQ 901 950 ENSP00000401597/1-781 CFDVAPE--- ---------- ENSBTAP00000012967/1-781 WSEVAEL--- ---------- ENSTTRP00000011153/1-608 ---------- ---------- bmy_19144T0/1-415 W--------- ---------- BACU007653/1-920 WSDVAEFSPV TLSFALEKGS