KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:48:33 2014 Check: 00 .. Name: ENSP00000249330/1-615 Len: 618 Check: 8155 Weight: 1.00 Name: ENSTTRP00000004476/1-616 Len: 618 Check: 4779 Weight: 1.00 Name: ENSBTAP00000013014/1-453 Len: 618 Check: 2224 Weight: 1.00 Name: bmy_12075T0/1-605 Len: 618 Check: 7067 Weight: 1.00 Name: BACU012059/1-539 Len: 618 Check: 4077 Weight: 1.00 // 1 50 ENSP00000249330/1-615 MKALRLSASA LFCLLLIN-G LGAAPPGRPE AQPPPLSSEH KEPVAGDAVP ENSTTRP00000004476/1-616 MKSLRLPAPV LLCFLLLTKG LGAAPPGHPE AQPPPPSSEH KEPVAGDAVL ENSBTAP00000013014/1-453 MKSLRLPATV LFCLLLLIKG LGAAPPGHPE AQPPPPSSEH KEPVAGDAVL bmy_12075T0/1-605 MKSLRLPAPV LLCFLLLTKG LGAAPPGHPE VQPPPPSSEH EEPVAGDAVL BACU012059/1-539 MKSLRLPAPV LLCFLLLTKG LGAAPPGHPE AQPPPPSSEH EEPVAGDAVL 51 100 ENSP00000249330/1-615 GPKDGSAPEV RGARNSEPQD EGELFQGVDP RALAAVLLQA LDRPASPPAP ENSTTRP00000004476/1-616 GPKDVSAPEV RAARNSEPQD EGELFQGVDP RALAAVLLQA LDRPASPPAP ENSBTAP00000013014/1-453 GSKDVSALEV RAARNSEPQD EGELFQGVDP RALAAVLLQA LDRPASPPAP bmy_12075T0/1-605 GPKGVSAPEV RAARNSEPQD EEELFQGVDP RALAAVLLQA LDRPASPPAP BACU012059/1-539 GPKGVSAPEV RAARNSEPQD EGELFQGVDP RALAAVLLQA LDRPASPPAP 101 150 ENSP00000249330/1-615 SGSQQGPEEE AAEALLTETV RSQTHSLPAP ESPEPAAPPR PQTPENGPEA ENSTTRP00000004476/1-616 GGSQQRPEEE AAEALLTETV RSQTHSLPAP ETQAPAAPPR PQTQENGPEA ENSBTAP00000013014/1-453 GGSQQRPEEE TAESLLTETV RSQTHSLPVP ETQAPAAPPR PQTQENGAEA bmy_12075T0/1-605 GGSQQRPEEE AAEALLTETV RSQTHSLPAP ETQAPAAPPR PQTQENGPEA BACU012059/1-539 GGSQQRPEEE AAEALLTETV RSQTHSLPAP ETQAPAAPPR PQTQENGPEA 151 200 ENSP00000249330/1-615 SDPSEELEAL ASLLQELRDF SPSSAKRQQE TAAAETETRT HTLTRVNLES ENSTTRP00000004476/1-616 ADPSEELEAL ASLLQELRDF SPSSAKRQQE TAAAETETRT HTLTRVNLES ENSBTAP00000013014/1-453 PDPSEELEAL ASLLQELRDF SPSSAKRQQE TAAAETETRT HTLTRVNLES bmy_12075T0/1-605 ADPSEELEAL ASLLQELRDF SPSSAKRQQE TAAAETETRT HTLTRVNLES BACU012059/1-539 ADPSEELEAL ASLLQELRDF SPSSAKRQQE TAAAETETRT HTLTRVNLES 201 250 ENSP00000249330/1-615 PGPERVWRAS WGEFQARVPE RAPLPPPAPS QFQARMPDSG PLPETHKFGE ENSTTRP00000004476/1-616 PGPERVWRAS WGEFQARVPE RAALPPPAPP QFQARMPESG PLPEAHQFGE ENSBTAP00000013014/1-453 PGPERVWRAS WGEFQARVPE RAPLPPPAPP QFQARVPESG PLPEAHQFGG bmy_12075T0/1-605 PGPERVWRAS WGEFQARVPE RAALPPPAPP QFQARMPESG PLPEAHQFGE BACU012059/1-539 PGPERVWRAS WGEFQARVPE RAALPPPAPP QFQARMPESG HLPEAHQFGE 251 300 ENSP00000249330/1-615 GVSSPKTHLG EALAPLSKAY QGVAAPFPKA RRPESALLGG SEAGERLLQQ ENSTTRP00000004476/1-616 GVSSPKTHLG EALAPLSKAY QGLGAPFTKA RRPETSLLGG SEAGERLLQQ ENSBTAP00000013014/1-453 G-SSPKTHLG EALAPLSKAY QGLAAPFPKA RRPETSLLGG TEAGERLLQQ bmy_12075T0/1-605 GVSSPKTHLG EALAPLSKAY QGLGAPFTKA RRPETTLLGG SEAGERLLQQ BACU012059/1-539 GVSSPKTHLG EALAPLSKAY QGLGAPFTKA RRPETSLLGG SEAGERLLQQ 301 350 ENSP00000249330/1-615 GLAQVEAGRR QAEATRQAAA QEERLADLAS DLLLQYLLQG GARQRGLGGR ENSTTRP00000004476/1-616 GLAQVEAGRR QAEATRQAAA QEERLADLAS DLLLQYLLQG GARQRGLGGR ENSBTAP00000013014/1-453 GLAQVEAGRR QAEATRQAAA QEERLADLAS DLLLQYLLQG GARQRGLGGR bmy_12075T0/1-605 GLAQVEAGRR QAEATRQAAA QEERLADLAS DLLLQYLLQG GARQRGLGGR BACU012059/1-539 GLAQVEAGRR XXXXXXX--- ---XXXXLAS DLLLQYLLQG GARQRGLGGR 351 400 ENSP00000249330/1-615 GL-QEAAEER ESAREEEEAE QERRGGEERV GEEDEEAAEA EAEAEEAERA ENSTTRP00000004476/1-616 GLQQEE--ER ETERGQEAAE QERRGGEERA GEEDEEAAEA EAEAEEAERA ENSBTAP00000013014/1-453 GLQEEEGGGR ETARQQEEAE QERRGGEERV GEEDEEAAEA EAEAEEAERA bmy_12075T0/1-605 GL-------- -----QEEAE QERRGGEERV GEEDEEAAEA EAEAEEAERA BACU012059/1-539 GL-------- -----QEEAE QERRGGEERV GEEDEEAAEA EAEAEEAERA 401 450 ENSP00000249330/1-615 RQNALLFAEE EDGEAGAEDK RSQEETPGHR RKEAEGTEEG GEEEDDE-EM ENSTTRP00000004476/1-616 RQNALLFAEE EDGEAGAEDK RSQEETPGHR RKEAEGAEEG GEEDDDDEEM ENSBTAP00000013014/1-453 RQNALLFAEE EEGEAGAEDK RSREETPGHR RKEAEGAEEG GAEEDES--- bmy_12075T0/1-605 RQNALLFAEE EDGEAGAEDK RSQEETPGHR RKEAEGAEEG GEEDDDDEEM BACU012059/1-539 RQNALLFAEE EDGEAGAEDK RSQEETPGHR RKEAEGAEEG GEEDDDDEEM 451 500 ENSP00000249330/1-615 DPQTIDSLIE LSTKLHLPAD DVVSIIEEVE EKRKRKKNAP PEPVPPPRAA ENSTTRP00000004476/1-616 DPQTIDXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000013014/1-453 ---------- ---------- ---------- ---------- ---------- bmy_12075T0/1-605 DPQTIDSLIE LSTKLHLPAD DVVSIIEEVE EKRKRKKNAP PEPVPPPRAA BACU012059/1-539 DPQTIDSLIE LSTKLHLPAD DVVSIIEEVE EKRKRKKNAP PEPVPPPRAA 501 550 ENSP00000249330/1-615 PAPTHVRSPQ PPPPAPAPAR DELPDWNEVL PPWDREEDEV YPPGPYHPFP ENSTTRP00000004476/1-616 XXXXXXXXPQ WQPLSPAPAR DELPDWNEVL PPWDREEDEV FPPGPYHPFP ENSBTAP00000013014/1-453 ---------- ---------- ---------- ---ERDGSDI ---------- bmy_12075T0/1-605 PVPTHARSPQ PQPLSPAPAR DELPDWNEVL PPWDREEDEV FPPGPYHPFP BACU012059/1-539 PVPTHARSPQ PQPLSPAPAR DELPDWNESL S--QAKSRNA FP-------- 551 600 ENSP00000249330/1-615 NYIRPRTLQP PSALRRRHYH HALPPSRHYP GREAQARRAQ EEAEAEERRL ENSTTRP00000004476/1-616 NYIRPRTLQP PAASRRRHYH HALPPSSHYP DREAQARRAQ EQAEAEERRL ENSBTAP00000013014/1-453 ---------- ---------- ---------- ---------- ---------- bmy_12075T0/1-605 NYIRPRTLQP PAASRRRHYH HALPPSSHYP DREAQARRAQ EQAEAEERRL BACU012059/1-539 -FI------- SEEKKKKSDT FPTPPA---- ---------- ---------- 601 650 ENSP00000249330/1-615 QEQEELENYI EHVLLRRP ENSTTRP00000004476/1-616 QEQEELENYI EHVLLRRP ENSBTAP00000013014/1-453 ---------- -------- bmy_12075T0/1-605 QEQEELENYI EHVLLRRP BACU012059/1-539 ---------- --------