KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:48:33 2014 Check: 00 .. Name: ENSTTRP00000005975/1-309 Len: 314 Check: 3002 Weight: 1.00 Name: BACU019151/1-302 Len: 314 Check: 5489 Weight: 1.00 Name: bmy_06196T0/1-174 Len: 314 Check: 8256 Weight: 1.00 Name: ENSP00000349415/1-206 Len: 314 Check: 6247 Weight: 1.00 Name: ENSBTAP00000013018/1-206 Len: 314 Check: 6265 Weight: 1.00 // 1 50 ENSTTRP00000005975/1-309 RPGPRPLPGG SLDRFASCRT QRKTVPGPPP GRSAVKELFS FLIAIIHFSL BACU019151/1-302 -PGPRPLP-G SLDRFVSCRT QRKTVPRPPP GRRFAVEEPR ARRAGLGPSP bmy_06196T0/1-174 ---------- ---------- ---------- ---------- ---------- ENSP00000349415/1-206 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013018/1-206 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000005975/1-309 RRSLSCGPLL KIKCDCYLSL CRIIRKNTLA CVSSFLGKVT LT----VELS BACU019151/1-302 AEGEASGP-- ---RGQAART PRVERCSSTA GVSVGLPRNT SSSAREVSRR bmy_06196T0/1-174 ---------- ---------- ---------- ---------- ---------- ENSP00000349415/1-206 ---------- ---MDEDVLT TLKILIIGES GVG------- ---------K ENSBTAP00000013018/1-206 ---------- ---MDEDVLT TLKILIIGES GVG------- ---------K 101 150 ENSTTRP00000005975/1-309 TSLLLRFTDD TFDPELAATI GVDFKVKTIS VDGNKAKLAI WVILHQTANF BACU019151/1-302 RSLLLRFTDD TFDPELAATI GVDFKVKTIS VDGNKAKLAI W-----TANF bmy_06196T0/1-174 --FLSKFS-- FFQ------- GVDFKVKTIS VDGNKAKLAI W--------- ENSP00000349415/1-206 SSLLLRFTDD TFDPELAATI GVDFKVKTIS VDGNKAKLAI W--------- ENSBTAP00000013018/1-206 SSLLLRFTDD TFDPELAATI GVDFKVKTIS VDGNKAKLAI W--------- 151 200 ENSTTRP00000005975/1-309 FLKDWKIFSS TPRWAVQQY- DTAGQERFRT LTPSYYRGAQ GVILVYDVTR BACU019151/1-302 FLKDWKIFSS TPRWAVQQYI RTAGQERFRT LTPSYYRGAQ GVILVYDVTR bmy_06196T0/1-174 ---------- ---------- DTAGQERFRT LTPSYYRGAQ GVILVYDVTR ENSP00000349415/1-206 ---------- ---------- DTAGQERFRT LTPSYYRGAQ GVILVYDVTR ENSBTAP00000013018/1-206 ---------- ---------- DTAGQERFRT LTPSYYRGAQ GVILVYDVTR 201 250 ENSTTRP00000005975/1-309 RDTFVKLDNW LNELETYCTR NDIVNMLVGN KIDKENREVD RNEGLKFARK BACU019151/1-302 RDTFVKLDNW LNELETYCTR NDIVNMLVGN KIDKENREVD RNEGLKFARK bmy_06196T0/1-174 RDTFVKLDNW LNELETYCTR NDIVNMLVGN KIDKENREVD RNEGLKFARK ENSP00000349415/1-206 RDTFVKLDNW LNELETYCTR NDIVNMLVGN KIDKENREVD RNEGLKFARK ENSBTAP00000013018/1-206 RDTFVKLDNW LNELETYCTR NDIVNMLVGN KIDKENREVD RNEGLKFARK 251 300 ENSTTRP00000005975/1-309 HSMLFIEASA KTCDGVQCAF EELVEKIIQT PGLWESENQN KGVKLTHREE BACU019151/1-302 HSMLFIEASA KTCDGVQCAF EELVEKIIQT PGLWESENQN KGVKLTHREE bmy_06196T0/1-174 HSMLFIEASA KTCDGVQCAF EELVEKIIQT PGLWESENQN KGVKLTHREE ENSP00000349415/1-206 HSMLFIEASA KTCDGVQCAF EELVEKIIQT PGLWESENQN KGVKLSHREE ENSBTAP00000013018/1-206 HSMLFIEASA KTCDGVQCAF EELVEKIIQT PGLWESENQN KGVKLTHREE 301 350 ENSTTRP00000005975/1-309 GQGGGPCGGY CSVL BACU019151/1-302 GQGGGACGGY CSVL bmy_06196T0/1-174 GQGGGACGGY CSVL ENSP00000349415/1-206 GQGGGACGGY CSVL ENSBTAP00000013018/1-206 GQGGGACGGY CSVL