KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:48:34 2014 Check: 00 .. Name: ENSP00000245222/1-654 Len: 690 Check: 542 Weight: 1.00 Name: ENSBTAP00000013019/1-610 Len: 690 Check: 7245 Weight: 1.00 Name: bmy_06424T0/1-678 Len: 690 Check: 8615 Weight: 1.00 Name: BACU002184/1-667 Len: 690 Check: 9768 Weight: 1.00 // 1 50 ENSP00000245222/1-654 ---------- ---------- MNGHLEAEE- --QQDQRPDQ ELTGSWGHGP ENSBTAP00000013019/1-610 ---------- ---------- MNGNLEAEE- --RQDQRPEQ ELTWSWGYRP bmy_06424T0/1-678 MDTLKQRSSR TRPCPCFPLP TMGVLDSDSY PPSSPQRPEQ ELTWSWGHRP BACU002184/1-667 ---------- ---------- -MGVLDSDSY PPSSPQRPEQ ELTWSWGHRP 51 100 ENSP00000245222/1-654 RSTLVRAKAM A-PPPPPLAA STPLLHGEFG SYPARGPRFA LTLTSQALHI ENSBTAP00000013019/1-610 RSALDRVKAM A--PPPPLAP STPLLHGEFG SYPDRGPRFA LTLTPQALHI bmy_06424T0/1-678 RSALDRVKAM APPPPPPLTP STPLLHGEFG SYPARGPRFA LTLTPQALHI BACU002184/1-667 RSALDRVKAM APPPPPPLTA STPLLHGEFG SYPARGPRFA LTLTPQALHI 101 150 ENSP00000245222/1-654 QRLRPKPEAR PRGGLVPLAE VSGCCTLRSR SPSDSAAYFC IYTYPRGRRG ENSBTAP00000013019/1-610 QRLRPKPEAR PRGGLVLLTE VSGCCTLRSR SPLDSAAYFC VYTYPRGRRG bmy_06424T0/1-678 QRLRPKPEAR PRGGLVLLAE VSGCCTLRSR SPSDPAAYFC IYTYPRGRRG BACU002184/1-667 QRLRPKPEAR PRGGLVLLAE VSGCCTLRSR SPSDSAAYFC IYTYPRGRRG 151 200 ENSP00000245222/1-654 ARRRATRTFR ADGAATYEEN RAEAQRWATA LTCLLRGLPL PGDGEITPDL ENSBTAP00000013019/1-610 ARRRAARTFR ADGAATYEEN RAEAQRWATA LTCLLRGLPL PGDGEITPDL bmy_06424T0/1-678 GRRRAARTFR ADGAATYEEN RAEAQRWATG LTCLLRGLPL PGDGEITPDL BACU002184/1-667 GRRRAARTFR ADGAATYEEN RAEAQRWATA LTCLLRGLPL PGDGEITPDL 201 250 ENSP00000245222/1-654 LPRPPRLLLL VNPFGGRGLA WQWCKNHVLP MISEAGLSFN LIQTERQNHA ENSBTAP00000013019/1-610 LPRPPRLLLL VNPFGGRGLA WQWCKNHVLP MISEAGLSFN LIQTERQNHA bmy_06424T0/1-678 LPRPPRLLLL VNPFGGRGLA WQWCKNHVLP MISEAGLSFN LIQTERHNHA BACU002184/1-667 LPRPPRLLLL VNPFGGRGLA WQWCKNHVLP MISEAGLSFN LIQTERHNHA 251 300 ENSP00000245222/1-654 RELVQGLSLS EWDGIVTVSG DGLLHEVLNG LLDRPDWEEA VKMPVGILPC ENSBTAP00000013019/1-610 RELVQGLNLS EWDGIVTVSG DGLLYEVLNG LLQRPDWEEA VKTPVGILPC bmy_06424T0/1-678 RELVQGLSLS EWDGIVTVSG DGLLYEVLNG LLERPDWEEA VKTPVGILPC BACU002184/1-667 RELVQGLSLS EWDGIVTVSG DGLLYEVLNG LLERPDWEEA VKTPVGILPC 301 350 ENSP00000245222/1-654 GSGNALAGAV NQHGGFEPAL GLDLLLNCSL LLCRGGGHPL DLLSVTLASG ENSBTAP00000013019/1-610 GSGNALAGAV NRHGGFEPAL GIDLLLNCSL LLCRGGSHPL DLLSVTLASG bmy_06424T0/1-678 GSGNALAGAV NQHGGFEPAL GIDLLLNCSL LLCRGGSHPL DLLSVTLASG BACU002184/1-667 GSGNALAGAV NQHGGFEPAL GIDLLLNCSL LLCRGGSHPL DLLSVTLASG 351 400 ENSP00000245222/1-654 SRCFSFLSVA WGFVSDVDIQ SERFRALGSA RFTLGTVLGL ATLHTYRGRL ENSBTAP00000013019/1-610 SRCFSFLSVA WGFVSDVDIQ SERFRALGSA RFTLGTVLGL ATLHTYRGRF bmy_06424T0/1-678 SRCFSFLSVA WGFVSDVDIQ SERFRALGSA RFTLGTVLGL ATLHTYRGRL BACU002184/1-667 SRCFSFLSVA WGFVSDVDIQ SERFRALGSA RFTLGTVLGL ATLHTYRGRL 401 450 ENSP00000245222/1-654 SYLPATVEPA SPTPAHSL-- --------PR AKSELTLTPD PAPPMAHSPL ENSBTAP00000013019/1-610 SYLPATVEPA SPAPAHGL-- --------PR AKSELTLAPA PAPPVAHSPL bmy_06424T0/1-678 SYLPATVEPA SPAPAHGL-- --------PR AKSELTLAPG PAPPVAHSPL BACU002184/1-667 SYLPATVEPA SPAPAHGLPR AKSPAPGLPR AKSELTLAPG PAPPVAHSPL 451 500 ENSP00000245222/1-654 HRSVSDLPLP LPQPALASPG SPEPLPILSL NGGGPELAGD WGGAGDAPLS ENSBTAP00000013019/1-610 HRSVSDLPLP LPQPALTSPG SPEPLPILSL NGGGPELAGD WGGAGDAPLS bmy_06424T0/1-678 HRSVSDLPLP LPQPALTSPG SPEPMPILSL NGGGPELAGD WGGAGDAPLS BACU002184/1-667 HRSVSDLPLP LPQPALTSPG SPEPPPILSL NGGGPELAGD WGGAGDAPLS 501 550 ENSP00000245222/1-654 PDPLLSSPPG SPKAALHSPV SEGAPVIPPS SGLPLPTPDA RVGASTCGPP ENSBTAP00000013019/1-610 PDPLLPSPPG TPKAAQLSPI SEGASEMAAS SGLPPPTPGA PVSISAGGPP bmy_06424T0/1-678 PDPLLPSPPG SPKAAQLSPI TEGASEMPAS SGXPPPTPDA RVAISAGGPP BACU002184/1-667 PDPLLPSPPG SPKAAQLSPI TEGASEMPAS SGLPPPTPDA RVAISAGGPP 551 600 ENSP00000245222/1-654 DHLLPPLGTP LPPDWVTLEG DFVLMLAISP SHLGADLVAA PHARFDDGLV ENSBTAP00000013019/1-610 DHLLPPLGTP IPPGWVTMEG DFVLILAILP SHLGADLVAA PHARFDDGL- bmy_06424T0/1-678 DHLLPPLGTP LPPGWVTMEG DFVLILAISP SHLGADLVAA PHARFDDGLV BACU002184/1-667 DHLLPPLGTP LPPGWVTMEG DFVLILAISP SHLGADLVAA PHARFDDGLV 601 650 ENSP00000245222/1-654 HLCWVRSGIS RAALLRLFLA MERGSHFSL- -GCPQLGYAA ARAFRLEPLT ENSBTAP00000013019/1-610 HLCWVRSGIS RAALLRMFLG H--GAWYPLQ PGCPYLGYAA AHAFXAEP-- bmy_06424T0/1-678 HLCWVRGGIS RAALLRLFLA MERGSHFSL- -GCPQLGYAA ARAFRLEPLT BACU002184/1-667 HLCWVRGGIS RAALLRLFLA MERGSHFSL- -GCPQLGYAA ARAFRLEPLT 651 700 ENSP00000245222/1-654 PRGVLTVDGE QVEYGPLQAQ MHPGIGTLLT GPPGCPGREP ENSBTAP00000013019/1-610 ---------- ---------- ---------- ---------- bmy_06424T0/1-678 PRGVLTVDGE KVEYGPLQAQ VHPGLGTLLT GPSGCPGREP BACU002184/1-667 PRGVLTVDGE QVEYGPLQAQ VHPGLGTLLT GPSGCPGREP