KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:48:34 2014 Check: 00 .. Name: bmy_02827T0/1-445 Len: 643 Check: 1686 Weight: 1.00 Name: ENSTTRP00000008980/1-642 Len: 643 Check: 4514 Weight: 1.00 Name: BACU019581/1-623 Len: 643 Check: 2500 Weight: 1.00 Name: ENSP00000353098/1-642 Len: 643 Check: 8619 Weight: 1.00 Name: ENSBTAP00000013028/1-642 Len: 643 Check: 558 Weight: 1.00 // 1 50 bmy_02827T0/1-445 ---------- ---------- ---------- ---MLIQTKL ESALQRPTLP ENSTTRP00000008980/1-642 MPCGEDWLSH PLGIVQGFFA QNGVNPGWEK KVIEYFKEKL KENNAPKWVP BACU019581/1-623 ---------- ---------A QNGVNPGWEK KVIEYFKEKL KENNVLKWVP ENSP00000353098/1-642 MPCGEDWLSH PLGIVQGFFA QNGVNPDWEK KVIEYFKEKL KENNAPKWVP ENSBTAP00000013028/1-642 MPCGEDWLSH PLGIVQGFFA QNGVNPDWEK KVIEYFKEKL KENNAPKWVP 51 100 bmy_02827T0/1-445 VVTRGVMKMM KIWT------ ---------- ----YSQINR KSSMRV---- ENSTTRP00000008980/1-642 SLNEVPLHYL KPNSFVKFRC MIQDMFDPEF YMGVYETVNR NTKARVLHFG BACU019581/1-623 SLNEVPLHYL KPNSFVKFRC MIQDMFDPEF YMGVYETVNR NTKARVLHFG ENSP00000353098/1-642 SLNEVPLHYL KPNSFVKFRC MIQDMFDPEF YMGVYETVNQ NTKAHVLHFG ENSBTAP00000013028/1-642 SLNEVPLHYL KPNSFVKFRC MVQDMFDPEF YMGVYETVNR NTKARVLHFG 101 150 bmy_02827T0/1-445 ---------P DKQEAL---- AMTM------ CNAVP----- ---------- ENSTTRP00000008980/1-642 KYRDVAECGP QQEVDLNSPR TTTLERQTFY CVPVPGESTW VKEVYVNTNQ BACU019581/1-623 KYRDVAECGP QQEVDLNSPR TTTLERQTFY CVPVPGESTW SFNAYVNTNQ ENSP00000353098/1-642 KYRDVAECGP QQELDLNSPR NTTLERQTFY CVPVPGESTW VKEAYVNANQ ENSBTAP00000013028/1-642 KYRDVAECGP QQEVDLNSPR TTTLERQTFY CVPVPGESMW VKEAYVNANQ 151 200 bmy_02827T0/1-445 ---------- ---------- ---LNL---- ---------- -GSVGGLQWC ENSTTRP00000008980/1-642 ARVSPSTSYT PSRHKRSYED DEDMDLQPNK QKEQHAGARQ AGSVGGLQWC BACU019581/1-623 ARVSPSTSYT PSRHKRSYED DEDMDLQPNK QKEQHAGARE AGSVGGLQWC ENSP00000353098/1-642 ARVSPSTSYT PSRHKRSYED DDDMDLQPNK QKDQHAGARQ AGSVGGLQWC ENSBTAP00000013028/1-642 ARVSPSTSYT PSRHKRSYED DEDMDLQPNK QKDQHMGARQ AGNVGGLQWC 201 250 bmy_02827T0/1-445 GEPKRLETEA SSGQQLNSLN LSSPFDLNFP LPGEKGPACL VKPEICDVTV ENSTTRP00000008980/1-642 GEPKRLETEA SSGQQLNSLN LSSPFDLNFP LPGEKGPACL VKV-YEDWDC BACU019581/1-623 GEPKRLETEA SSGQQLNSLN LSSPFDLNFP LPGEKGPACL VKV-YEDWDC ENSP00000353098/1-642 GEPKRLETEA STGQQLNSLN LSSPFDLNFP LPGEKGPACL VKV-YEDWDC ENSBTAP00000013028/1-642 GEPKRLETEA SSGQQLSSLN LSSPFDLNFP LPGEKGPACL VKV-YEDWDC 251 300 bmy_02827T0/1-445 YKEEEHFLLF KEMC------ ------RDAS SLLDPMECTD TAEEQRVHSP ENSTTRP00000008980/1-642 FKVNDVLELY GILSVDPVLS ILNNDERDAS SLLDPMECTD TAEEQRVHSP BACU019581/1-623 FKVNDVLELY GILSVDPVLS ILNNDERDAS SLLDPMECTD TAEEQRVHSP ENSP00000353098/1-642 FKVNDILELY GILSVDPVLS ILNNDERDAS ALLDPMECTD TAEEQRVHSP ENSBTAP00000013028/1-642 FKVNDVLELY GILSVDPVLS ILNNDERDAS SLLDPMECTD MAEEQRVHSP 301 350 bmy_02827T0/1-445 PASLVPRIHV VLAQKLQHIN PLLPACLNKE ESKT--FVSS FMSELSPVRA ENSTTRP00000008980/1-642 PASLVPRIHV VLAQKLQHIN PLLPACLNKE ESKTCKFVSS FMSELSPVRA BACU019581/1-623 PASLVPRIHV VLAQKLQHIN PLLPACLNKE ESKTCKFVSS FMSELSPVRA ENSP00000353098/1-642 PASLVPRIHV ILAQKLQHIN PLLPACLNKE ESKTCKFVSS FMSELSPVRA ENSBTAP00000013028/1-642 PASLVPRIHV VLAQKLQHIN PLLPACLNKE ESKTCKFVSG FMSELSPVRA 351 400 bmy_02827T0/1-445 ELLGFLTHAL LGDSLAAEYL ILHLISTVYT RRDVLPLGKF TVNLSGCPRN ENSTTRP00000008980/1-642 ELLGFLTHAL LGDSLAAEYL ILHLISTVXX XXXXXXXXXX XXXXXXXXXX BACU019581/1-623 ELLGFLTHAL LGDSLAAEYL ILHLISTVYT RRDVLPLGKF TVNLSGCPRN ENSP00000353098/1-642 ELLGFLTHAL LGDSLAAEYL ILHLISTVYT RRDVLPLGKF TVNLSGCPRN ENSBTAP00000013028/1-642 ELLGFLTHAL LGDSLAAEYL ILHLISTVYT RRDVLPLGKF TVNLSGCPRN 401 450 bmy_02827T0/1-445 STFTEHLYRI IQHLVPASFH LQMTIANMNH LKFIPHKDYT ANRLVSGLLQ ENSTTRP00000008980/1-642 XXXXXXXXXX XXXXXXXSFH LQMTIANMNH LKFIPHKDYT SNRLVSGLLQ BACU019581/1-623 STFTEHLYRI IQHLVPASFH LQMTIANMNH LKFIPHKDYT ANRLVSGLLQ ENSP00000353098/1-642 STFTEHLYRI IQHLVPASFR LQMTIENMNH LKFIPHKDYT ANRLVSGLLQ ENSBTAP00000013028/1-642 STFTEHLYRI IQHLVPASFR LQMTIENMNH LKFIPHKDYT ANRLVSGLLQ 451 500 bmy_02827T0/1-445 LPSNTSLVID ETLLEQGQLD TPGVHNVTAL SNLITWQKVD YDFSYHQMEF ENSTTRP00000008980/1-642 LPSNTSLVID ETLLEQGQLD TPGVHNVTAL SNLITWQKVD YDFSYHQMEF BACU019581/1-623 LPSNTSLVID ETLLEQGQLD TPGVHNVTAL SNLITWQKVD YDFNYHQMEF ENSP00000353098/1-642 LPSNTSLVID ETLLEQGQLD TPGVHNVTAL SNLITWQKVD YDFSYHQMEF ENSBTAP00000013028/1-642 LPSNTSLVID ETLLEQGQLD TPGVHNVTAL SNLITWQKVD YDFSYHQMEF 501 550 bmy_02827T0/1-445 PCNINVFITS EGRSLLP--- ---------- ---------- ---------- ENSTTRP00000008980/1-642 PCNINVFITS EGRSLLPADC QIHLQPQLIP PNMEEYMNSL LSAVLPSVLN BACU019581/1-623 PCNINVFITS DGRSLLPADC QIHLQPQLIP PNMEEYMNSL LSAVLPSVLN ENSP00000353098/1-642 PCNINVFITS EGRSLLPADC QIHLQPQLIP PNMEEYMNSL LSAVLPSVLN ENSBTAP00000013028/1-642 PCNINVFITS EGRSLLPADC QIHLQPQLMP PNMEEYMNSL LSAVLPSVLN 551 600 bmy_02827T0/1-445 ---------- ---------- --AVEDDFVE MRKNDPQSIT ADDLHQLLIV ENSTTRP00000008980/1-642 KFRIYLTLLR FLDYSISDEI TKAVEDDFVE MRKNDPQSIT ADDLHQLLIV BACU019581/1-623 KFRIYLTLLR FLDYSISDEI TKAVEDDFVE MRKNDPQSIT ADDLHQLLIV ENSP00000353098/1-642 KFRIYLTLLR FLEYSISDEI TKAVEDDFVE MRKNDPQSIT ADDLHQLLVV ENSBTAP00000013028/1-642 KFRIYLTLLR FLDYSISDEI TKAVEDDFVE MRKNDPQSIT ADDLHQLLIV 601 650 bmy_02827T0/1-445 ARFLSLSAGQ TTLSRERWLR AKQLESLRRT RLQQQKCVNG NEL ENSTTRP00000008980/1-642 ARFLSLSAGQ TTLSRERWLR AKQLESLRRT RLQQQKCVNG NEL BACU019581/1-623 ARFLSLSAGQ TTLSRERWLR AKQLESLRRT RLQQQKCVNG NEL ENSP00000353098/1-642 ARCLSLSAGQ TTLSRERWLR AKQLESLRRT RLQQQKCVNG NEL ENSBTAP00000013028/1-642 ARFLSLSAGQ TTLSRERWLR AKQLESLRRA RLQQQKCVNG NEL