KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:48:35 2014 Check: 00 .. Name: ENSP00000365840/1-484 Len: 525 Check: 257 Weight: 1.00 Name: BACU014821/1-500 Len: 525 Check: 8131 Weight: 1.00 Name: ENSTTRP00000001539/1-464 Len: 525 Check: 2549 Weight: 1.00 Name: ENSBTAP00000013034/1-334 Len: 525 Check: 5490 Weight: 1.00 Name: bmy_13509T0/1-501 Len: 525 Check: 123 Weight: 1.00 // 1 50 ENSP00000365840/1-484 --MKKGIRYE TSRKTS---- ---------- -YIFQQPQHG PWQTRMRKIS BACU014821/1-500 -------MVD VPK------- ---------- -VPPATVTQS SADKEMRKIP ENSTTRP00000001539/1-464 ---------- ---------- ---------- -----PLWHS PQQTRMRKVP ENSBTAP00000013034/1-334 ---------- ---------- ---------- ---------- ---------- bmy_13509T0/1-501 MQLTQGMRVE STKEHKASGC RVQSGSEHSI LVPPTTVAQS SADKEMRKIP 51 100 ENSP00000365840/1-484 NHGSLRVAKV AYPLGLCVGV FIYVAYIKWH RATATQAFFS ITRAAPGARW BACU014821/1-500 NNGNLRMTKV AYPLGLFVCL FIYVAYIKWH WASATQAFLG IPEVATGARR ENSTTRP00000001539/1-464 NNGNLRVTKV AYPLGLFVCL FIYVAYIKWH WASATQAFLG IPEVATGARR ENSBTAP00000013034/1-334 ---------- ---------- ---------- ---------- ---------- bmy_13509T0/1-501 NNGNLRMTKV AYPLGLFVCL FIYVAYIKWH WASATQAFLG IPEVATGARR 101 150 ENSP00000365840/1-484 GQQAHSPLGT AADGHEVFYG IMFDAGSTGT RVHVFQFTRP PRETPTLTHE BACU014821/1-500 GQQSRSPPGT AARGPELFYG IMFDAGSTGT RVHVFQFSRQ PGETPTLTHE ENSTTRP00000001539/1-464 GQQSHGPPGT AARGPEVFYG IMFDAGSTGT RVHVFQFSRQ P-QTPTLTHE ENSBTAP00000013034/1-334 ---------- ---------- ---------- ---------- ---------- bmy_13509T0/1-501 GQQSRSPPGT AARGPELFYG IMFDAGSTGT RVHVFQFSRQ PGETPTLTHE 151 200 ENSP00000365840/1-484 TFKALKPGLS AYADDVEKSA QGIRELLDVA KQDIPFDFWK ATPLVLKATA BACU014821/1-500 TFKALKPGLS AYADDVDKST PGIQELLDIA KQDIPFDFWK ATPLVLKATA ENSTTRP00000001539/1-464 TFKALKPGLS AYADDVDKST PGIQELLDIA KQDIPFEFWK ATPLVLKATA ENSBTAP00000013034/1-334 ---------- -------QSA PGIQELLDVA KQDIPFDFWK ATPLVLKATA bmy_13509T0/1-501 TFKALKPGLS AYADDVDKST PGIQELLDIA KQDIPFDFWK ATPLVLKATA 201 250 ENSP00000365840/1-484 GLRLLPGEKA QKLLQKVKKV FKASPFLVGD DCVSIMNGTD EGVSAWITIN BACU014821/1-500 GLRLLPGEKA QKLLRKVKEV FEASPFLVGD DCVSIMNGTD EGVSAWITVN ENSTTRP00000001539/1-464 GLRLLPGEKA QKLLQKVKEV FEASPFLVGD DCVSIMNGTD EGVSAWITVN ENSBTAP00000013034/1-334 GLRLLPGEKA QKLLRKVKEV FEASPFLVGD DCVSIMNGTD EGVSAWITVN bmy_13509T0/1-501 GLRLLPGEKA QKLLRKVKEV FEASPFLVGD DCVSIMNGTD EGVSAWITVN 251 300 ENSP00000365840/1-484 FLTGSLKTPG GSSVG---ML DLGG------ GSTQIAFLPR VEGTLQASPP BACU014821/1-500 FLTGSFREAR PHHKGGDLSV ALAGVHSSWT SSHQVRAFAC CAEELDALNP ENSTTRP00000001539/1-464 FLTGSLKTPG RSSVG---ML DLGG------ GSTQITFLPR FEGTLQTSPP ENSBTAP00000013034/1-334 FLTGSLKTPG RGSVG---ML DLGG------ GSTQITFLPR LEGTLQTSPP bmy_13509T0/1-501 FLTGSLKTPG RSNVG---ML DLGG------ GSTQITFLPR FEGTLQTSPP 301 350 ENSP00000365840/1-484 G--------- YLTALRMFNR TYKLYSYSYL GLGLMSARLA ILGGVEGQPA BACU014821/1-500 TEGAPGRSRK LLPCPEFPPS PHILDPGCYL GLGLMSARLA VLGGEEGKPA ENSTTRP00000001539/1-464 G--------- FLTSLQMFNR TYRLYSYSYL GLGLMSARLA VLGGEEGKPA ENSBTAP00000013034/1-334 S--------- FLTSLQVFNR TYRLYSYSYL GLGLMSARLA VLGGEEGKPA bmy_13509T0/1-501 G--------- FLTSLQMFNR TYRLYSYSYL GLGLMSARLA VLGGEEGKPA 351 400 ENSP00000365840/1-484 KDGKELVSPC LSPSFKGEWE HAEVTYRVSG QKAAASLHEL CAARVSEVLQ BACU014821/1-500 EDGAELVSPC LSPGFRGEWE HAEVTYRVSG QEAAGNLYQL CARRVSEILR ENSTTRP00000001539/1-464 EDGAELVSPC LSPGFRGEWE HAEVTYRVSG QEAAGSLYQL CARRVSEILR ENSBTAP00000013034/1-334 EDGQELVSPC LSAGFRGEWE HAEVTYRIAG QEAAGSLYQL CARRVSEILR bmy_13509T0/1-501 EDGAELVSPC LSPGFRGEWE HAEVTYRVSG QEAAGSLYQL CARRVSEILR 401 450 ENSP00000365840/1-484 NRVHRTEEVK HVDFYAFSYY YDLAAGVGLI DAEKGGSLVV GDFEIAAKY- BACU014821/1-500 NKVHRTEEVK DVDFYAFSYY YDLAANVGLI DAEKGGSLVV GDFETAAKYG ENSTTRP00000001539/1-464 NKVHRTEEVK DVDFYAFSYY YDLAANVGLI DAE-GGSLVV GDFETAAKY- ENSBTAP00000013034/1-334 NKVHRTEEVK DVEFYAFSYY YDLAANVGLI DAEKGGSLVV EDFEIAAKY- bmy_13509T0/1-501 NKVHRTEEVK DVDFYAFSYY YDLAAHVGLI DAEKGGSLVV GDFETAAKY- 451 500 ENSP00000365840/1-484 -----VCRTL ETQPQSSPFS CMDLTYVSLL LQEFGFPRSK VLKLTRKIDN BACU014821/1-500 ALSPPVCRTA ETQPPRSPFL CLDLTYVSSL LQGLGFPGDK VLKLTRRIDN ENSTTRP00000001539/1-464 -----XXXXX XXXXXXXXXX XXXXXXXXXX XHGLGFPEDK VLKLTRKIDN ENSBTAP00000013034/1-334 -----VCRTA ETRPPPSPFL CLDLTYISLL LQELGFPGDK VLKLTRKIDN bmy_13509T0/1-501 -----VCRTA ETQPPRSPFL CLDLTYVSSL LHGLGFPGDK VLKLTQKIDN 501 550 ENSP00000365840/1-484 VETSWALGAI FHYIDSLNRQ KSPAS BACU014821/1-500 VETSWALGAT FHYIDSLSRQ KSPTL ENSTTRP00000001539/1-464 VETSWALGAT FHYIDSLSRQ KSPAL ENSBTAP00000013034/1-334 VETSWALGAT FHYIDSLSRH KNPAS bmy_13509T0/1-501 VETSWALGAT FHYIDSLSRQ KSPTL