KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:48:36 2014 Check: 00 .. Name: ENSP00000286692/1-266 Len: 357 Check: 4743 Weight: 1.00 Name: ENSBTAP00000013037/1-266 Len: 357 Check: 7105 Weight: 1.00 Name: bmy_20989T0/1-357 Len: 357 Check: 7114 Weight: 1.00 Name: BACU019352/1-231 Len: 357 Check: 6565 Weight: 1.00 Name: ENSTTRP00000007336/1-231 Len: 357 Check: 6637 Weight: 1.00 // 1 50 ENSP00000286692/1-266 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013037/1-266 ---------- ---------- ---------- ---------- ---------- bmy_20989T0/1-357 MRTLPGVPQP RGGRASRVPA RPASKDYAPD RAPPPASFPG TKQRVDPALR BACU019352/1-231 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007336/1-231 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000286692/1-266 ---------- ---------- ---------M WWFQQGLSFL PSALVIWTSA ENSBTAP00000013037/1-266 ---------- ---------- ---------M WWFQQGLSFL PSALVIWTAA bmy_20989T0/1-357 PSASRFRKKA AVGVNNSLVL FVLSGDLFEM WWFQQGLSFL PSALVIWTAA BACU019352/1-231 ---------- ---------- ---------M WWFQQGLSFL PSALVIWTAA ENSTTRP00000007336/1-231 ---------- ---------- ---------M WWFQQGLSFL PSALVIWTAA 101 150 ENSP00000286692/1-266 AFIFSYITAV TLHHIDPALP YISDTGTVAP EKCLFGAMLN IAAVLCIATI ENSBTAP00000013037/1-266 AFIFSYITAI TLHHVDPVLP YISDTGTVAP EKCLFGAMLN IAAVLCVATI bmy_20989T0/1-357 AFIFSYITAI TLHHVDPVLP YISDTGTVAP EKCLFGAMLN IAAVLCIATI BACU019352/1-231 AFIFSYITAI TLHHVDPVLP YISDTGTVAP EKCLFGAMLN IAAVLCIATI ENSTTRP00000007336/1-231 AFIFSYITAI TLHHVDPVLP YISDTGTVAP EKCLFGAMLN IAAVLCIATI 151 200 ENSP00000286692/1-266 YVRYKQVHAL SPEENVIIKL NKAGLVLGIL SCLGLSIVAN FQ-------- ENSBTAP00000013037/1-266 YVRYKQVHAL NPEENRIIRL NKAGLVLGLL SCLGLSLVAN FQ-------- bmy_20989T0/1-357 YVRYKQVHAL NPEESXIIKL NKAGLVLGLL SCLGLSIVAN FQVCVLAQHR BACU019352/1-231 YVRYKQVHAL NPEESRIIKL NKAGLVLGLL SCLGLSIVAN FQ-------- ENSTTRP00000007336/1-231 YVRYKQVHAL NPEESRIIKL NKAGLVLGLL SCLGLSIVAN FQ-------- 201 250 ENSP00000286692/1-266 ----KTTLFA AHVSGAVLTF GMGSLYMFVQ TILSYQMQPK IHGKQVFWIR ENSBTAP00000013037/1-266 ----KTTFFA VHVCGAVLTF GMGSLYMFVQ TILSYQMQPK IHGKQVFWIR bmy_20989T0/1-357 YFPEKTTFFA VHVCGAVLTF GIGSLYMFVQ TILSYQMQPK IHGKQVFWIR BACU019352/1-231 ----KTTFFA VHVCGAVLTF GIGSLYMFVQ TILSYQMQPK IHGKQVFWIR ENSTTRP00000007336/1-231 ----KTTFFA VHVCGAVLTF GMGSLYMFVQ TILSYQMQPK IHGKQVFWIR 251 300 ENSP00000286692/1-266 LLLVIWCGVS ALSMLTCSSV LHSGNFGTDL EQKLHWNPED KGYVLHMITT ENSBTAP00000013037/1-266 LLLVIWCGVS AFSMLTCSSL LYNGSFGADI VQKLHWNPED KGYVLHMITT bmy_20989T0/1-357 LLLVIWCGVS AFSMLTCSSL LYSGSFGADI VQKLHWNPED KGYVLHMITT BACU019352/1-231 LLLVIWCGVS AFSMLTCSSL LYSGSFGADI VQKLHWNPED KGYVLHMITT ENSTTRP00000007336/1-231 LLLVIWCGVS AFSMLTCSSL LYSGSFGADI VQKLHWNPED KGYVLHMITT 301 350 ENSP00000286692/1-266 AAEWSMSFSF FGFFLTYIRD FQKISLRVEA NLHGLTLYDT APCPINNERT ENSBTAP00000013037/1-266 AAEWSMSLSF FGFFLTYIRD FQKISLRVEA TLHGLTLYDT APCPVNNERT bmy_20989T0/1-357 AAEWSMSLSF FGFFLTYIRD FQKISLRVEA TLHGLTLYDT APCPINNERT BACU019352/1-231 AAEWSMSLSF FGFFLTYIRD FQ-------- ---------- ---------- ENSTTRP00000007336/1-231 AAEWSMSLSF FGFFLTYIRD FQ-------- ---------- ---------- 351 400 ENSP00000286692/1-266 RLLSRDI ENSBTAP00000013037/1-266 WLLSRDV bmy_20989T0/1-357 RLLSRDV BACU019352/1-231 ------- ENSTTRP00000007336/1-231 -------