KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:48:37 2014 Check: 00 .. Name: ENSP00000383234/1-587 Len: 597 Check: 3815 Weight: 1.00 Name: ENSBTAP00000013073/1-595 Len: 597 Check: 4103 Weight: 1.00 Name: bmy_09619T0/1-414 Len: 597 Check: 7458 Weight: 1.00 Name: ENSTTRP00000013383/1-405 Len: 597 Check: 9897 Weight: 1.00 // 1 50 ENSP00000383234/1-587 MAEKGDCIAS VYGYDLGGRF VDFQPLGFGV NGLVLSAVDS RACRKVAVKK ENSBTAP00000013073/1-595 MAEKGGCLAS VYGYDLGGHF VDFQPLGFGV NGLVLSAVDS RARRKVAVKK bmy_09619T0/1-414 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013383/1-405 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000383234/1-587 IALSDARSMK HALREIKIIR RLDHDNIVKV YEVLGPKGTD LQGELFKFSV ENSBTAP00000013073/1-595 ITLSDARSRK HALREIKIIQ RLDHDNIVKV YEVLGPQGTD LQGELFKFSV bmy_09619T0/1-414 ---------- ---------- ---------- ------MGAH PSG------- ENSTTRP00000013383/1-405 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000383234/1-587 AYIVQEYMET DLARLLEQGT LAEEHAKLFM YQLLRGLKYI HSANVLHRDL ENSBTAP00000013073/1-595 AYIVQEYMET DLARLLEQGT LTEEHAKLFM YQLLRGLKYI HSANVLHRDL bmy_09619T0/1-414 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013383/1-405 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000383234/1-587 KPANIFISTE DLVLKIGDFG LARIVDQHYS HKGYLSEGLV TKWYRSPRLL ENSBTAP00000013073/1-595 KPANIFISTE DLVLKIGDFG LARIVDQHYS HKGYLSEGLV TKWYRSPRLL bmy_09619T0/1-414 ---------- ---------- ---------- --GYLSEGLV TKWYRSPRLL ENSTTRP00000013383/1-405 ---------- ---------- ---------- --GYLSEGLV TKWYRSPRLL 201 250 ENSP00000383234/1-587 LSPNNYTKAI DMWAAGCILA EMLTGRMLFA --GAHELEQM QLILETIPVI ENSBTAP00000013073/1-595 LSPNNYTKAI DMWAAGCILA EMLTGRMLFA APGAHELDQM QLILETVPVI bmy_09619T0/1-414 LSPNNYTKAI DMWAAGCILA EMLTGRMLFA --GAHELEQM QLILETIPVV ENSTTRP00000013383/1-405 LSPNNYTKAI DMWAAGCILA EMLTGRMLFA --GAHELEQM QLILETIPVI 251 300 ENSP00000383234/1-587 REEDKDELLR VMPSFVSSTW EVKRPLRKLL PEVNSEAIDF LEKILTFNPM ENSBTAP00000013073/1-595 REEDKDELLK VMPSFVSSTW EVKRPLRKLL PEVNSEAIDF LEKILTFNPM bmy_09619T0/1-414 REEDKDELLK VMPSFVSSTW EVKRPLRKLL PEVNSEAIDF LEKILTFNPM ENSTTRP00000013383/1-405 REEDKDELLK VMPSFVSSAW EVKRPLRKLL PEVNSEAIDF LEKILTFNPM 301 350 ENSP00000383234/1-587 DRLTAEMGLQ HPYMSPYSCP EDEPTSQHPF RIEDEIDDIV LMAANQSQLS ENSBTAP00000013073/1-595 DRLTAEMGLQ HPYMSPYSCP EDEPTSQHPF RIEDEIDDIL LMAASQSQLS bmy_09619T0/1-414 DRLTAEMGLQ HPYMSPYSCP EDEPTSQHPF RIEDEIDDIL LMAANQSQLS ENSTTRP00000013383/1-405 DRLTAEMGLQ HPYMSPYACP EDEPTSQHPF RIEDEIDDIL LMAANQSQLS 351 400 ENSP00000383234/1-587 NWDTCSSR-Y PVSLSSDLEW RPDRCQDASE VQRDPRAGSA PLAEDVQVDP ENSBTAP00000013073/1-595 NWDRCGSRGY PVSLSSDLEW RPDRCQDASE GQRDPRAGSA PLVEDVQVDP bmy_09619T0/1-414 NWDR-----Y PVSLSSDLEW RPDRYQDASG VQLDPRAGSA PLAEDVQVDP ENSTTRP00000013383/1-405 NWDRCGSR-Y PVSLSSDLEW RPDRYQDASE VQLDPRAGSA PLAEDVQVDP 401 450 ENSP00000383234/1-587 RKDSHSSSER FLEQSHSSME RAFEADYGRS CDYKVGSPSY LDKLLWRDNK ENSBTAP00000013073/1-595 RKDSQSSSER FLEQSHSSME RAFEADYGRS CDYKVGSPSY LDKLLWRDSK bmy_09619T0/1-414 RKDSQSSSER FLEQSHSSME RAFEADYGRS CDYKVGSPSY LDKLLWRDNK ENSTTRP00000013383/1-405 RKDSQSSSER FLEQSHSSME RAFEADYGRS CDYKVGSPSY LDKLLWRDNK 451 500 ENSP00000383234/1-587 PHHYSEPKLI LDLSHWKQAA GAPPT----- -ATGLADTGA REDEPASLFL ENSBTAP00000013073/1-595 PHHYSEPKLI LDLSHWKQAA GAPPAAGVAG VATVTVDPGP RDDEPASLFL bmy_09619T0/1-414 PHHYSEPKLI LDLSHWKQAA GATPTAAVAA VAAVAADAGP RDEEPASLFL ENSTTRP00000013383/1-405 PHHYSEPKLI LDLSHWKQAA GAPPT----- -AAVAADAGP RDEEPASLFL 501 550 ENSP00000383234/1-587 EIAQWVKSTQ GGPEH-ASPP ADDPERRLSA SPPGRPAPVD GGASPQFDLD ENSBTAP00000013073/1-595 EIAQWVKSTQ GGPERGASPP PDGPERRRS- -PPGRPAPID GGASPQFDLD bmy_09619T0/1-414 EIAQWVQSTQ GGPER-ASPP PDGPERRLSA SPPGRPAPID GGASPQFDLD ENSTTRP00000013383/1-405 EIAQWVQSTQ GVPER-ASPP PDGPERRLSA SPPGRPAPID GGASPQFDLD 551 600 ENSP00000383234/1-587 VFISRALKLC TKPEDLPDNK LGDLNGACIP EHPGDLVQTE AFSKERW ENSBTAP00000013073/1-595 VFISRALKLC TKPEDLPDNK LGDLNGACIS EHPGDLVQTE AFSKERW bmy_09619T0/1-414 VFISRALKLC TKPEDLPDNK LGDLNGACIS EHPGDLVQTE AFSKERW ENSTTRP00000013383/1-405 VFISRALKLC TKPEDLPDSK LGDLNGACIS EHPGDLVQTE AFSKERW