KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:48:38 2014 Check: 00 ..
Name: bmy_15991T0/1-665 Len: 740 Check: 7690 Weight: 1.00
Name: ENSP00000370745/1-740 Len: 740 Check: 2985 Weight: 1.00
Name: ENSBTAP00000013075/1-740 Len: 740 Check: 2210 Weight: 1.00
Name: ENSTTRP00000004807/1-738 Len: 740 Check: 4341 Weight: 1.00
Name: BACU010276/1-740 Len: 740 Check: 1410 Weight: 1.00
//
1 50
bmy_15991T0/1-665 MAAFSEMGVM PEIAQAVEEM DWLLPTDIQA ESIPLILGGG DVLMNV----
ENSP00000370745/1-740 MAAFSEMGVM PEIAQAVEEM DWLLPTDIQA ESIPLILGGG DVLMAAETGS
ENSBTAP00000013075/1-740 MAAFSEMGVM PEIAQAVEEM DWLLPTDIQA ESIPLILGGG DVLMAAETGS
ENSTTRP00000004807/1-738 MAAFSEMGVM PEIAQAVEEM DWLLPTDIQA ESIPLILGGG DVLMAAETGS
BACU010276/1-740 MAAFSEMGVM PEIAQAVEEM DWLLPTDIQA ESIPLILGGG DVLMAAETGS
51 100
bmy_15991T0/1-665 ---------- --LNYVCL-- ------GLTF LVLICLVLNK WQMNPYDRGS
ENSP00000370745/1-740 GKTGAFSIPV IQIVYETLKD QQEGKKGKTT IKTGASVLNK WQMNPYDRGS
ENSBTAP00000013075/1-740 GKTGAFSIPV IQIVYETLKD QQEGKKGKAT IKTGASVLNK WQMNPYDRGS
ENSTTRP00000004807/1-738 GKTGAFSIPV IQIVYETLKD QQEGKKGKAT IKTGASVLNK WQMNPYDRGS
BACU010276/1-740 GKTGAFSIPV IQIVYETLKD QQEGKKGKTT IKTGASVLNK WQMNPYDRGS
101 150
bmy_15991T0/1-665 AFAIGSDGLC CQSREVKEWH GCRATKGLMK GKHYYEVSCH DQGLCRVGWS
ENSP00000370745/1-740 AFAIGSDGLC CQSREVKEWH GCRATKGLMK GKHYYEVSCH DQGLCRVGWS
ENSBTAP00000013075/1-740 AFAIGSDGLC CQSREVKEWH GCRATKGLTK GKHYYEVSCH DQGLCRVGWS
ENSTTRP00000004807/1-738 AFAIGSDGLC CQSREVKEWH GCRATKGLTR -KHYYEVSCH DQGLCRVGWS
BACU010276/1-740 AFAIGSDGLC CQSREVKEWH GCRATKGLTK GKHYYEVSCH DQGLCRVGWS
151 200
bmy_15991T0/1-665 SMQASLDLGT DKFGFGFGGT GKKSHNKQFD NYGEEFTMHD TIGCYLDMDK
ENSP00000370745/1-740 TMQASLDLGT DKFGFGFGGT GKKSHNKQFD NYGEEFTMHD TIGCYLDIDK
ENSBTAP00000013075/1-740 SMQASLDLGT DKFGFGFGGT GKKSHNKQFD NYGEEFTMHD TIGCYLDIDK
ENSTTRP00000004807/1-738 SMQASLDLGT DKFGFGFGGT GKKSHNKQFD NYGEEFTMHD TIGCYLDMDK
BACU010276/1-740 SMQASLDLGT DKFGFGFGGT GKKSHNKQFD NYGEEFTMHD TIGCYLDMDK
201 250
bmy_15991T0/1-665 GHVKFSKNGK ---------- --LSRDHF-- ----NAELKF NFGEEEFKFP
ENSP00000370745/1-740 GHVKFSKNGK DLGLAFEIPP HMKNQALFPA CVLKNAELKF NFGEEEFKFP
ENSBTAP00000013075/1-740 GHVKFSKNGK DLGLAFEIPP HMKNQALFPA CVLKNAELKF NFGEEEFKFP
ENSTTRP00000004807/1-738 GHVKFSKNGK DLGLAFEIPP HMKNQGLFPA CVLKNAELKF NFGEEEFKFP
BACU010276/1-740 GHVKFSKNGK DLGLAFEIPP HMKNQGLFPA CVLKNAELKF NFGEEEFKFP
251 300
bmy_15991T0/1-665 PKDGFVALSK APDSFIVKSQ HTGNAQVAQT KFLPNAPKAL IVEPSRELAE
ENSP00000370745/1-740 PKDGFVALSK APDGYIVKSQ HSGNAQVTQT KFLPNAPKAL IVEPSRELAE
ENSBTAP00000013075/1-740 PKDGFVALSK APESFVVKSQ HTGSAQVAQT KFLPNAPKAL IVEPSRELAE
ENSTTRP00000004807/1-738 PKDGFVALSK APDSFTVKSQ HTGNAQVAQA K-LPNAPKAL IVEPSRELAE
BACU010276/1-740 PKDGFVALSK APDSFIVKSQ HTGNAQVAQT KFLPNAPKAL IVEPSRELAE
301 350
bmy_15991T0/1-665 QTLNNVKQFK KYVDNPKLRE LLIIGGVAAR DQLSVLDNG- ----------
ENSP00000370745/1-740 QTLNNIKQFK KYIDNPKLRE LLIIGGVAAR DQLSVLENGV DIVVGTPGRL
ENSBTAP00000013075/1-740 QTLNNVKQFK KYIDNPKLRE LLIIGGVAAR DQLSVLDNGV DIVVGTPGRL
ENSTTRP00000004807/1-738 QTLNNVKQFK KYVDNPKLRE LLIIGGVAAR DQLSVLDNGV DIVVGTPGRL
BACU010276/1-740 QTLNNVKQFK KYVDNPKLRE LLIIGGVAAR DQLSVLDNGV DIVVGTPGRL
351 400
bmy_15991T0/1-665 ---------- ---------- --DGLLSQGY SDFINRIHNQ IPQITSDGKR
ENSP00000370745/1-740 DDLVSTGKLN LSQVRFLVLD EADGLLSQGY SDFINRMHNQ IPQVTSDGKR
ENSBTAP00000013075/1-740 DDLVSTGKLN LSQVRFLVLD EADGLLSQGY SDFINRIHNQ IPQITSDGKR
ENSTTRP00000004807/1-738 DDLVSTGKLN LSQVRFLVLD EADGLLSQGY SDFINRIHNQ IPQITSDGKR
BACU010276/1-740 DDLVSTGKLN LSQVRFLVLD EADGLLSQGY SDFINRIHNQ IPQITSDGKR
401 450
bmy_15991T0/1-665 LQVIVCSATL HSFDVKKLSE KIMHFPTWVD LKGEDSVPDT VHHVVVPVNP
ENSP00000370745/1-740 LQVIVCSATL HSFDVKKLSE KIMHFPTWVD LKGEDSVPDT VHHVVVPVNP
ENSBTAP00000013075/1-740 LQVIVCSATL HSFDVKKLSE KIMHFPTWVD LKGEDSVPDT VHHVVVPVNP
ENSTTRP00000004807/1-738 LQVIVCSATL HSFDVKKLSE KIMHFPTWVD LKGEDSVPDT VHHVVVPVNP
BACU010276/1-740 LQVIVCSATL HSFDVKKLSE KIMHFPTWVD LKGEDSVPDT VHHVVVPVNP
451 500
bmy_15991T0/1-665 KADRLWERLG KNHIRTDEVH AKDNTRPGAN GPEMWSEAVK ILKGEYAVRA
ENSP00000370745/1-740 KTDRLWERLG KSHIRTDDVH AKDNTRPGAN SPEMWSEAIK ILKGEYAVRA
ENSBTAP00000013075/1-740 KTDRLWERLG KSHIRTDEVH AKDNTRPGAN SPEMWSEAIK ILKGEYAVRA
ENSTTRP00000004807/1-738 KADRIWERLG KNHIRTDEVH AKDNTRPGAN SPEMWSEAIK ILKGEYAVRA
BACU010276/1-740 KADRLWERLG KNHMRTDEVH AKDNTRPGAN GPEMWSEAIK ILKGEYAVRA
501 550
bmy_15991T0/1-665 IKEHKMDQAI IFCRTKIDCD NLEQYFMQQG GGPDKKGHQF SCVCLHGDRK
ENSP00000370745/1-740 IKEHKMDQAI IFCRTKIDCD NLEQYFIQQG GGPDKKGHQF SCVCLHGDRK
ENSBTAP00000013075/1-740 IKEHKMDQAI IFCRTKIDCD NLEQYFMQQG GGPDKKGHQF SCVCLHGDRK
ENSTTRP00000004807/1-738 IKEHKMDQAI IFCRTKIDCD NLEQYFMQQG GGPDKKGHQF SCVCLHGDRK
BACU010276/1-740 IKEHKMDQAI IFCRTKIDCD NLEQYFMQQG GGPDKKGHQF SCVCLHGDRK
551 600
bmy_15991T0/1-665 PHERKQNLER FKKGDVRFLI CTDVAARGID IHGVPYVINV TLPDEKQNYV
ENSP00000370745/1-740 PHERKQNLER FKKGDVRFLI CTDVAARGID IHGVPYVINV TLPDEKQNYV
ENSBTAP00000013075/1-740 PHERKQNLER FKKGDVRFLI CTDVAARGID IHGVPYVINV TLPDEKQNYV
ENSTTRP00000004807/1-738 PHERKQNLER FKKGDVRFLI CTDVAARGID IHGVPYVINV TLPDEKQNYV
BACU010276/1-740 PHERKQNLER FKKGDVRFLI CTDVAARGID IHGVPYVINV TLPDEKQNYV
601 650
bmy_15991T0/1-665 HRIGRVGRAE RMGLAISLVA TEKEKVWYHV CSSRGKGCYN TRLKEDGGCT
ENSP00000370745/1-740 HRIGRVGRAE RMGLAISLVA TEKEKVWYHV CSSRGKGCYN TRLKEDGGCT
ENSBTAP00000013075/1-740 HRIGRVGRAE RMGLAISLVA TEKEKVWYHV CSSRGKGCYN TRLKEDGGCT
ENSTTRP00000004807/1-738 HRIGRVGRAE RMGLAISLVA TEKEKVWYHV CSSRGKGCYN TRLKEDGGCT
BACU010276/1-740 HRIGRVGRAE RMGLAISLVA TEKEKVWYHV CSSRGKGCYN TRLKEDGGCT
651 700
bmy_15991T0/1-665 IWYNEMQLLS EIEEHLNCTI SQVEPDIKVP VDEFDGKVTY GQKRTTGGGN
ENSP00000370745/1-740 IWYNEMQLLS EIEEHLNCTI SQVEPDIKVP VDEFDGKVTY GQKRAAGGGS
ENSBTAP00000013075/1-740 IWYNEMQLLS EIEEHLNCTI SQVEPDIKVP VDEFDGKVTY GQKRTLGGGN
ENSTTRP00000004807/1-738 IWYNEMQLLS EVEEHLNCTI SQVEPDIKVP VDEFDGKVTY GQKRTAGGGN
BACU010276/1-740 IWYNEMQLLS EIEEHLNCTI SQVEPDIKVP VDEFDGKVTY GQKRTIGGGS
701 750
bmy_15991T0/1-665 YKGHVDILAP TVQELAALEK EAQTSFLHLG YLPNQLFRTF
ENSP00000370745/1-740 YKGHVDILAP TVQELAALEK EAQTSFLHLG YLPNQLFRTF
ENSBTAP00000013075/1-740 YKGHVDVLAP TVQELAALEK EAQTSFLHLG YLPNQLFRTF
ENSTTRP00000004807/1-738 YKGHVDILAP TVQELAALEK EAQTSFLHLG YLPNQLFRTF
BACU010276/1-740 YKGHVDVLAP TVQELAALEK EAQTSFLHLG YLPNQLFRTF