KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:48:38 2014 Check: 00 .. Name: bmy_15991T0/1-665 Len: 740 Check: 7690 Weight: 1.00 Name: ENSP00000370745/1-740 Len: 740 Check: 2985 Weight: 1.00 Name: ENSBTAP00000013075/1-740 Len: 740 Check: 2210 Weight: 1.00 Name: ENSTTRP00000004807/1-738 Len: 740 Check: 4341 Weight: 1.00 Name: BACU010276/1-740 Len: 740 Check: 1410 Weight: 1.00 // 1 50 bmy_15991T0/1-665 MAAFSEMGVM PEIAQAVEEM DWLLPTDIQA ESIPLILGGG DVLMNV---- ENSP00000370745/1-740 MAAFSEMGVM PEIAQAVEEM DWLLPTDIQA ESIPLILGGG DVLMAAETGS ENSBTAP00000013075/1-740 MAAFSEMGVM PEIAQAVEEM DWLLPTDIQA ESIPLILGGG DVLMAAETGS ENSTTRP00000004807/1-738 MAAFSEMGVM PEIAQAVEEM DWLLPTDIQA ESIPLILGGG DVLMAAETGS BACU010276/1-740 MAAFSEMGVM PEIAQAVEEM DWLLPTDIQA ESIPLILGGG DVLMAAETGS 51 100 bmy_15991T0/1-665 ---------- --LNYVCL-- ------GLTF LVLICLVLNK WQMNPYDRGS ENSP00000370745/1-740 GKTGAFSIPV IQIVYETLKD QQEGKKGKTT IKTGASVLNK WQMNPYDRGS ENSBTAP00000013075/1-740 GKTGAFSIPV IQIVYETLKD QQEGKKGKAT IKTGASVLNK WQMNPYDRGS ENSTTRP00000004807/1-738 GKTGAFSIPV IQIVYETLKD QQEGKKGKAT IKTGASVLNK WQMNPYDRGS BACU010276/1-740 GKTGAFSIPV IQIVYETLKD QQEGKKGKTT IKTGASVLNK WQMNPYDRGS 101 150 bmy_15991T0/1-665 AFAIGSDGLC CQSREVKEWH GCRATKGLMK GKHYYEVSCH DQGLCRVGWS ENSP00000370745/1-740 AFAIGSDGLC CQSREVKEWH GCRATKGLMK GKHYYEVSCH DQGLCRVGWS ENSBTAP00000013075/1-740 AFAIGSDGLC CQSREVKEWH GCRATKGLTK GKHYYEVSCH DQGLCRVGWS ENSTTRP00000004807/1-738 AFAIGSDGLC CQSREVKEWH GCRATKGLTR -KHYYEVSCH DQGLCRVGWS BACU010276/1-740 AFAIGSDGLC CQSREVKEWH GCRATKGLTK GKHYYEVSCH DQGLCRVGWS 151 200 bmy_15991T0/1-665 SMQASLDLGT DKFGFGFGGT GKKSHNKQFD NYGEEFTMHD TIGCYLDMDK ENSP00000370745/1-740 TMQASLDLGT DKFGFGFGGT GKKSHNKQFD NYGEEFTMHD TIGCYLDIDK ENSBTAP00000013075/1-740 SMQASLDLGT DKFGFGFGGT GKKSHNKQFD NYGEEFTMHD TIGCYLDIDK ENSTTRP00000004807/1-738 SMQASLDLGT DKFGFGFGGT GKKSHNKQFD NYGEEFTMHD TIGCYLDMDK BACU010276/1-740 SMQASLDLGT DKFGFGFGGT GKKSHNKQFD NYGEEFTMHD TIGCYLDMDK 201 250 bmy_15991T0/1-665 GHVKFSKNGK ---------- --LSRDHF-- ----NAELKF NFGEEEFKFP ENSP00000370745/1-740 GHVKFSKNGK DLGLAFEIPP HMKNQALFPA CVLKNAELKF NFGEEEFKFP ENSBTAP00000013075/1-740 GHVKFSKNGK DLGLAFEIPP HMKNQALFPA CVLKNAELKF NFGEEEFKFP ENSTTRP00000004807/1-738 GHVKFSKNGK DLGLAFEIPP HMKNQGLFPA CVLKNAELKF NFGEEEFKFP BACU010276/1-740 GHVKFSKNGK DLGLAFEIPP HMKNQGLFPA CVLKNAELKF NFGEEEFKFP 251 300 bmy_15991T0/1-665 PKDGFVALSK APDSFIVKSQ HTGNAQVAQT KFLPNAPKAL IVEPSRELAE ENSP00000370745/1-740 PKDGFVALSK APDGYIVKSQ HSGNAQVTQT KFLPNAPKAL IVEPSRELAE ENSBTAP00000013075/1-740 PKDGFVALSK APESFVVKSQ HTGSAQVAQT KFLPNAPKAL IVEPSRELAE ENSTTRP00000004807/1-738 PKDGFVALSK APDSFTVKSQ HTGNAQVAQA K-LPNAPKAL IVEPSRELAE BACU010276/1-740 PKDGFVALSK APDSFIVKSQ HTGNAQVAQT KFLPNAPKAL IVEPSRELAE 301 350 bmy_15991T0/1-665 QTLNNVKQFK KYVDNPKLRE LLIIGGVAAR DQLSVLDNG- ---------- ENSP00000370745/1-740 QTLNNIKQFK KYIDNPKLRE LLIIGGVAAR DQLSVLENGV DIVVGTPGRL ENSBTAP00000013075/1-740 QTLNNVKQFK KYIDNPKLRE LLIIGGVAAR DQLSVLDNGV DIVVGTPGRL ENSTTRP00000004807/1-738 QTLNNVKQFK KYVDNPKLRE LLIIGGVAAR DQLSVLDNGV DIVVGTPGRL BACU010276/1-740 QTLNNVKQFK KYVDNPKLRE LLIIGGVAAR DQLSVLDNGV DIVVGTPGRL 351 400 bmy_15991T0/1-665 ---------- ---------- --DGLLSQGY SDFINRIHNQ IPQITSDGKR ENSP00000370745/1-740 DDLVSTGKLN LSQVRFLVLD EADGLLSQGY SDFINRMHNQ IPQVTSDGKR ENSBTAP00000013075/1-740 DDLVSTGKLN LSQVRFLVLD EADGLLSQGY SDFINRIHNQ IPQITSDGKR ENSTTRP00000004807/1-738 DDLVSTGKLN LSQVRFLVLD EADGLLSQGY SDFINRIHNQ IPQITSDGKR BACU010276/1-740 DDLVSTGKLN LSQVRFLVLD EADGLLSQGY SDFINRIHNQ IPQITSDGKR 401 450 bmy_15991T0/1-665 LQVIVCSATL HSFDVKKLSE KIMHFPTWVD LKGEDSVPDT VHHVVVPVNP ENSP00000370745/1-740 LQVIVCSATL HSFDVKKLSE KIMHFPTWVD LKGEDSVPDT VHHVVVPVNP ENSBTAP00000013075/1-740 LQVIVCSATL HSFDVKKLSE KIMHFPTWVD LKGEDSVPDT VHHVVVPVNP ENSTTRP00000004807/1-738 LQVIVCSATL HSFDVKKLSE KIMHFPTWVD LKGEDSVPDT VHHVVVPVNP BACU010276/1-740 LQVIVCSATL HSFDVKKLSE KIMHFPTWVD LKGEDSVPDT VHHVVVPVNP 451 500 bmy_15991T0/1-665 KADRLWERLG KNHIRTDEVH AKDNTRPGAN GPEMWSEAVK ILKGEYAVRA ENSP00000370745/1-740 KTDRLWERLG KSHIRTDDVH AKDNTRPGAN SPEMWSEAIK ILKGEYAVRA ENSBTAP00000013075/1-740 KTDRLWERLG KSHIRTDEVH AKDNTRPGAN SPEMWSEAIK ILKGEYAVRA ENSTTRP00000004807/1-738 KADRIWERLG KNHIRTDEVH AKDNTRPGAN SPEMWSEAIK ILKGEYAVRA BACU010276/1-740 KADRLWERLG KNHMRTDEVH AKDNTRPGAN GPEMWSEAIK ILKGEYAVRA 501 550 bmy_15991T0/1-665 IKEHKMDQAI IFCRTKIDCD NLEQYFMQQG GGPDKKGHQF SCVCLHGDRK ENSP00000370745/1-740 IKEHKMDQAI IFCRTKIDCD NLEQYFIQQG GGPDKKGHQF SCVCLHGDRK ENSBTAP00000013075/1-740 IKEHKMDQAI IFCRTKIDCD NLEQYFMQQG GGPDKKGHQF SCVCLHGDRK ENSTTRP00000004807/1-738 IKEHKMDQAI IFCRTKIDCD NLEQYFMQQG GGPDKKGHQF SCVCLHGDRK BACU010276/1-740 IKEHKMDQAI IFCRTKIDCD NLEQYFMQQG GGPDKKGHQF SCVCLHGDRK 551 600 bmy_15991T0/1-665 PHERKQNLER FKKGDVRFLI CTDVAARGID IHGVPYVINV TLPDEKQNYV ENSP00000370745/1-740 PHERKQNLER FKKGDVRFLI CTDVAARGID IHGVPYVINV TLPDEKQNYV ENSBTAP00000013075/1-740 PHERKQNLER FKKGDVRFLI CTDVAARGID IHGVPYVINV TLPDEKQNYV ENSTTRP00000004807/1-738 PHERKQNLER FKKGDVRFLI CTDVAARGID IHGVPYVINV TLPDEKQNYV BACU010276/1-740 PHERKQNLER FKKGDVRFLI CTDVAARGID IHGVPYVINV TLPDEKQNYV 601 650 bmy_15991T0/1-665 HRIGRVGRAE RMGLAISLVA TEKEKVWYHV CSSRGKGCYN TRLKEDGGCT ENSP00000370745/1-740 HRIGRVGRAE RMGLAISLVA TEKEKVWYHV CSSRGKGCYN TRLKEDGGCT ENSBTAP00000013075/1-740 HRIGRVGRAE RMGLAISLVA TEKEKVWYHV CSSRGKGCYN TRLKEDGGCT ENSTTRP00000004807/1-738 HRIGRVGRAE RMGLAISLVA TEKEKVWYHV CSSRGKGCYN TRLKEDGGCT BACU010276/1-740 HRIGRVGRAE RMGLAISLVA TEKEKVWYHV CSSRGKGCYN TRLKEDGGCT 651 700 bmy_15991T0/1-665 IWYNEMQLLS EIEEHLNCTI SQVEPDIKVP VDEFDGKVTY GQKRTTGGGN ENSP00000370745/1-740 IWYNEMQLLS EIEEHLNCTI SQVEPDIKVP VDEFDGKVTY GQKRAAGGGS ENSBTAP00000013075/1-740 IWYNEMQLLS EIEEHLNCTI SQVEPDIKVP VDEFDGKVTY GQKRTLGGGN ENSTTRP00000004807/1-738 IWYNEMQLLS EVEEHLNCTI SQVEPDIKVP VDEFDGKVTY GQKRTAGGGN BACU010276/1-740 IWYNEMQLLS EIEEHLNCTI SQVEPDIKVP VDEFDGKVTY GQKRTIGGGS 701 750 bmy_15991T0/1-665 YKGHVDILAP TVQELAALEK EAQTSFLHLG YLPNQLFRTF ENSP00000370745/1-740 YKGHVDILAP TVQELAALEK EAQTSFLHLG YLPNQLFRTF ENSBTAP00000013075/1-740 YKGHVDVLAP TVQELAALEK EAQTSFLHLG YLPNQLFRTF ENSTTRP00000004807/1-738 YKGHVDILAP TVQELAALEK EAQTSFLHLG YLPNQLFRTF BACU010276/1-740 YKGHVDVLAP TVQELAALEK EAQTSFLHLG YLPNQLFRTF