KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:48:39 2014 Check: 00 .. Name: BACU010285/1-273 Len: 365 Check: 226 Weight: 1.00 Name: bmy_19381T0/1-335 Len: 365 Check: 6608 Weight: 1.00 Name: ENSP00000346050/1-264 Len: 365 Check: 9214 Weight: 1.00 Name: ENSBTAP00000013079/1-264 Len: 365 Check: 9214 Weight: 1.00 // 1 50 BACU010285/1-273 ---------- ---------- ---------- ---------- ---------- bmy_19381T0/1-335 MTKDTAAPYT QQFQQLPRDT RGKPREECCN RVSEEVMFPE LQAICYQNAE ENSP00000346050/1-264 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013079/1-264 ---------- ---------- ---------- ---------- ---------- 51 100 BACU010285/1-273 ---------- ---------- ---------- ------MAVG KNKCLTKGDK bmy_19381T0/1-335 HCCANGTKWD ADAPKARLRS RKEPMKRKGL LGFSSTLVVS NNKRLTKGSK ENSP00000346050/1-264 ---------- ---------- ---------- ------MAVG KNKRLTKGGK ENSBTAP00000013079/1-264 ---------- ---------- ---------- ------MAVG KNKRLTKGGK 101 150 BACU010285/1-273 KGAKKKVIDP FSKKDWYDVK APAMFNIRNI GKTLVTRTQG TKIASDGLKG bmy_19381T0/1-335 KGAKKKVVDQ FPKKDWYDVK VPAMFNIRNI GKTLVTRTQG TKITSDGLKG ENSP00000346050/1-264 KGAKKKVVDP FSKKDWYDVK APAMFNIRNI GKTLVTRTQG TKIASDGLKG ENSBTAP00000013079/1-264 KGAKKKVVDP FSKKDWYDVK APAMFNIRNI GKTLVTRTQG TKIASDGLKG 151 200 BACU010285/1-273 RVFEVSLVDL QNDEVAFRKF KLITEDVQGK NCLTNFHGMD LTRDKMCSMV bmy_19381T0/1-335 RVFEVXPADL QNDEAAFRKF KLITEDVQGK NCLTNFRGMD LTCDKMCSRV ENSP00000346050/1-264 RVFEVSLADL QNDEVAFRKF KLITEDVQGK NCLTNFHGMD LTRDKMCSMV ENSBTAP00000013079/1-264 RVFEVSLADL QNDEVAFRKF KLITEDVQGK NCLTNFHGMD LTRDKMCSMV 201 250 BACU010285/1-273 KKWQTVIEAH VDVKTTDGYL LRLFCVGFTK KRNNQIR--K TSYAQHQQVR bmy_19381T0/1-335 KKWQTMTEAH VDVKTTDGYL LVWVLL---- -KNATIRFGK TSYAQHQQVH ENSP00000346050/1-264 KKWQTMIEAH VDVKTTDGYL LRLFCVGFTK KRNNQIR--K TSYAQHQQVR ENSBTAP00000013079/1-264 KKWQTMIEAH VDVKTTDGYL LRLFCVGFTK KRNNQIR--K TSYAQHQQVR 251 300 BACU010285/1-273 QIRKKMMEIM TQEVQTNDLK EVVNQLIPDS TGKDIEKPCQ SIYPFHDVFV bmy_19381T0/1-335 QT-QKMMEIT TREKQTNDLK EVVNKLIPDS IGKDTEE--- ----VHDVFV ENSP00000346050/1-264 QIRKKMMEIM TREVQTNDLK EVVNKLIPDS IGKDIEKACQ SIYPLHDVFV ENSBTAP00000013079/1-264 QIRKKMMEIM TREVQTNDLK EVVNKLIPDS IGKDIEKACQ SIYPLHDVFV 301 350 BACU010285/1-273 RKIKMLKSPS LNWENSWSYM VKVVVLEKLL GMRQVLKLKE LMDMSHQSKN bmy_19381T0/1-335 RKVKMLRKPK FE-------- -----LGKLT ELHGEGSSPG KATGEETGAK ENSP00000346050/1-264 RKVKMLKKPK FE-------- -----LGKLM ELHGEGSSSG KATGDETGAK ENSBTAP00000013079/1-264 RKVKMLKKPK FE-------- -----LGKLM ELHGEGSSSG KATGDETGAK 351 400 BACU010285/1-273 LFKNQTFNGD K---- bmy_19381T0/1-335 VEPADGYEPP V---- ENSP00000346050/1-264 VERADGYEPP VQESV ENSBTAP00000013079/1-264 VERADGYEPP VQESV