KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:48:39 2014 Check: 00 .. Name: bmy_18517T0/1-222 Len: 347 Check: 4988 Weight: 1.00 Name: BACU012563/1-112 Len: 347 Check: 3903 Weight: 1.00 Name: ENSBTAP00000013080/1-341 Len: 347 Check: 2821 Weight: 1.00 Name: ENSTTRP00000012708/1-322 Len: 347 Check: 8029 Weight: 1.00 Name: ENSP00000345702/1-347 Len: 347 Check: 9004 Weight: 1.00 // 1 50 bmy_18517T0/1-222 ---------- ---------- ---------- ---------- ---------- BACU012563/1-112 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013080/1-341 MEQYAANSNS SAEQIVVQAG QIQQQQQGGV TAVQLQTEAQ VASASGQQVQ ENSTTRP00000012708/1-322 ---------- ---------- -----QQGGV TAVQLQTEAQ VASASRQQVQ ENSP00000345702/1-347 MEQYTANSNS STEQIVVQAG QIQQQQQGGV TAVQLQTEAQ VASASGQQVQ 51 100 bmy_18517T0/1-222 ---------- ---------- ---------- ---------- ---------- BACU012563/1-112 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013080/1-341 TLQVVQGQPL MVQVSGGQLI TSTGQPIMVQ AVPGGQGQTI MQVPVSGTQG ENSTTRP00000012708/1-322 TLQVVQGQPL MVQVSGGQLI TSTGQPIMVQ AVPGGQGQTI MQVPVSGTQG ENSP00000345702/1-347 TLQVVQGQPL MVQVSGGQLI TSTGQPIMVQ AVPGGQGQTI MQVPVSGTQG 101 150 bmy_18517T0/1-222 ---------- ---------M QVEGQQGQTQ QVIIQQPHRA ITAGQMQTQQ BACU012563/1-112 ---------- ---------M QVQGQQGQTQ QIIIQQPHTA VTAGQTQTQQ ENSBTAP00000013080/1-341 LQQIQLVPPG QIQIQGGQAV QVQGQQGQTQ QIIIQQPQTA VTAGQTQTQQ ENSTTRP00000012708/1-322 LQQIQLVPPG QIQIQGGQAV QVQGQQGQTQ QIIIQQPQTA VTAGQTQTQQ ENSP00000345702/1-347 LQQIQLVPPG QIQIQGGQAV QVQGQQGQTQ QIIIQQPQTA VTAGQTQTQQ 151 200 bmy_18517T0/1-222 QIAVQGQQMA QTAEGQTIVY QPVNADGTIL QQ------GM ITKPAASLAG BACU012563/1-112 QIAVQGQQMA QTAEGQTIVY QPVNADGTIL QQ------GM ITKPAASLAG ENSBTAP00000013080/1-341 QIAVQGQQVA QTAEGQTIVY QPVNADGTIL QQ------GM ITIPAASLAG ENSTTRP00000012708/1-322 QIAVQGQQVA QTAEGQTIVY QPVNADGTIL QQVTVPVSGM ITIPAASLAG ENSP00000345702/1-347 QIAVQGQQVA QTAEGQTIVY QPVNADGTIL QQVTVPVSGM ITIPAASLAG 201 250 bmy_18517T0/1-222 AQIVQTGANA NTSSSGQETV TLILPVAGNV VNSGGVVMMV PGAGSVPAIQ BACU012563/1-112 AQIVQTGANA NTTSSGQGTV TVTLPVAGNV VSSEG----- ---------- ENSBTAP00000013080/1-341 AQIVQTGANT NTTSSGQGTV TVTLPVAGNV VNSGGMVMMV PGAGSVPAIQ ENSTTRP00000012708/1-322 AQIVQTGANT NTTSSGQGTV TVTLPVAGNV VNSGGMVMMV PGAGSVPAIQ ENSP00000345702/1-347 AQIVQTGANT NTTSSGQGTV TVTLPVAGNV VNSGGMVMMV PGAGSVPAIQ 251 300 bmy_18517T0/1-222 STPLPGAEML QEEPLYVNAK QYHHILKRGQ ARAKLEAEGK IPKERRKYLH BACU012563/1-112 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013080/1-341 RIPLPGAEML EEEPLYVNAK QYHRILKRRQ ARAKLEAEGK IPKERRKYLH ENSTTRP00000012708/1-322 RIPLPGAEML EEEPLYVNAK QYHRILKRRQ ARAKLEAEGK IPKERRKYLH ENSP00000345702/1-347 RIPLPGAEML EEEPLYVNAK QYHRILKRRQ ARAKLEAEGK IPKERRKYLH 301 350 bmy_18517T0/1-222 ESWHRHAMAW KRGEGGRFFS LKEKDSPHMQ DPNQAGEEAM TQIIRVS BACU012563/1-112 ---------W S--------- ---------- ---------- ------- ENSBTAP00000013080/1-341 ESRHRHAMAR KRGEGGRFFS PKEKDSPHMQ DPNQADEEAM TQIIRVS ENSTTRP00000012708/1-322 ESRHRHAMAR KRGEGGRFFS PKEKDSPHMQ DPNQADEEAM TQIIRVS ENSP00000345702/1-347 ESRHRHAMAR KRGEGGRFFS PKEKDSPHMQ DPNQADEEAM TQIIRVS