KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:48:39 2014 Check: 00 .. Name: ENSP00000216211/1-287 Len: 287 Check: 4883 Weight: 1.00 Name: ENSBTAP00000013081/1-287 Len: 287 Check: 4148 Weight: 1.00 Name: ENSTTRP00000000909/1-287 Len: 287 Check: 3793 Weight: 1.00 Name: bmy_04244T0/1-264 Len: 287 Check: 8006 Weight: 1.00 Name: BACU013469/1-287 Len: 287 Check: 2900 Weight: 1.00 // 1 50 ENSP00000216211/1-287 MPPLWALLAL GCLRFGSAVN LQPQLASVTF ATNNPTLTTV ALEKPLCMFD ENSBTAP00000013081/1-287 MPPLWVVLAL GCLRLGSGVN LQPQLASVTF ATNNPTLTTV ALEKPLCMFD ENSTTRP00000000909/1-287 MPPLWVLLAL GCLRLGSGVN LQPQLASVTF ATSNPTLTTV ALEKPLCMFD bmy_04244T0/1-264 MPPLWVLLAL GCLRLGSGVN LQPQLASVTF ATSNPTLTTV ALEKPLCMFD BACU013469/1-287 MPPLWVLLAL GCLRLGSGVN LQPQLASVTF ATSNPTLTTV ALEKPLCMFD 51 100 ENSP00000216211/1-287 SKEALTGTHE VYLYVLVDSA ISRNASVQDS TNTPLGSTFL QTEGGRTGPY ENSBTAP00000013081/1-287 SSAALHGTYE VYLYVLVDSA SFRNASVQDS TKTPLSSTFQ QTQGGRTGPY ENSTTRP00000000909/1-287 SPEALHGTYE VYLYVLVDSA SFRNASVQDS TKAPLSSTFQ QTEGGRTGPY bmy_04244T0/1-264 SSVALHGTYE IYLYVLVNS- ---------- ---------- --EGGRTGPY BACU013469/1-287 SSAALHGTYE VYLYVLVDSA SFRNASVQDS TKAPLSSTFQ QTEGGRTGPY 101 150 ENSP00000216211/1-287 KAVAFDLIPC SDLPSLDAIG DVSKASQILN AYLVRVGANG TCLWDPNFQG ENSBTAP00000013081/1-287 KAAAFDLTPC SDSPSLDAVR DVSRASEILN AYLIRVGTNG TCLLDPNFQG ENSTTRP00000000909/1-287 KAAAFDLTPC SDLPSLDAVR DVSRASEILN AYLVRVGTNG TCLSDPNFWG bmy_04244T0/1-264 KAAAFDLTPC SDLPSLDAVR DVSRASEILN AYLVRVGTNG TCLSDPNFWG BACU013469/1-287 KAAAFDLTPC SDLPSLDAVR DVSRASEILN AYLVRVGTNG TCLSDPNFWG 151 200 ENSP00000216211/1-287 LCNAPLSAAT EYRFKYVLVN MSTGLVEDQT LWSDPIRTNQ LTPYSTIDTW ENSBTAP00000013081/1-287 LCNPPLSAAT EYRFKYVLVN MSSGLVQDQT LWSDPIRTDR LTLYSAIDTW ENSTTRP00000000909/1-287 LCNPPLSAAT EYRFKYVLVN MSTGLVQDQT LWSDPIRTNR LAPYSAIDTW bmy_04244T0/1-264 LCNPPLSAAT EYRFKYVLVN MSTGLVQDQT LWSDPIRTNR LAPYSAIDTW BACU013469/1-287 LCNPPLSAAT EYRFKYVLVN MSTGLVQDQT LWSDPIRTNR LAPYSAIDTW 201 250 ENSP00000216211/1-287 PGRRSGGMIV ITSILGSLPF FLLVGFAGAI ALSLVDMGSS DGETTHDSQI ENSBTAP00000013081/1-287 PGRRSGGMIV ITSILGSLPF FLLIGFAGAI VLSLVDRGDA DGATSHDSQI ENSTTRP00000000909/1-287 PGRRSGGMIV IASILGSLPF FLLIGFAGAI VLSLVFMGSA DRETAHDSQI bmy_04244T0/1-264 PGRRSGGMIV ITSILGSLPF FLLIGFAGAI VLSLADVASA DGETAHDSQI BACU013469/1-287 PGRRSGGMIV ITSILGSLPF FLLIGCAGAI VLSLADMGSA DGETAHDSQI 251 300 ENSP00000216211/1-287 TQEAVPKSLG ASESSYTSVN RGPPLDRAEV YSSKLQD ENSBTAP00000013081/1-287 TQEAVPKSLG TSEPSYTSVN RGPSLDRAEV YASKLQD ENSTTRP00000000909/1-287 TQEAVPKSLG TSEPSYTSVN RGPPLDRAEV YVSKLQD bmy_04244T0/1-264 TQEAVPKSLG TSEPSYTSVN RGPPLDRAEV YASKLQD BACU013469/1-287 TQEAVPKSLG TSEPSYTSVN RGPPLDRAEV YASKLQD