KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:48:39 2014 Check: 00 .. Name: ENSP00000267845/1-662 Len: 669 Check: 1533 Weight: 1.00 Name: ENSBTAP00000013083/1-658 Len: 669 Check: 836 Weight: 1.00 Name: ENSTTRP00000015923/1-661 Len: 669 Check: 7741 Weight: 1.00 Name: bmy_13054T0/1-535 Len: 669 Check: 5364 Weight: 1.00 Name: BACU003211/1-668 Len: 669 Check: 1493 Weight: 1.00 // 1 50 ENSP00000267845/1-662 MMEPEEYRER GREMVDYICQ YLSTVRERRV TPDVQPGYLR AQLPESAPED ENSBTAP00000013083/1-658 MMEPEEYRER GKEMVDYICQ YLTTVRERRV TPDVRPGYLR AQLPESAPME ENSTTRP00000015923/1-661 MLEPEEYRRR GKEMVDYICQ YLSSVQERRV TPDVRPGYLR AQLPESAPEE bmy_13054T0/1-535 MMEPEEYRRR GKEMVDYICQ YLSSVQERRV TPDVRPGYLR AQLPESAPEE BACU003211/1-668 -MEPEEYRRR GKEMVDYICQ YLSSVQERRV TPDVRPGYLR AQLPESAPEE 51 100 ENSP00000267845/1-662 PDSWDSIFGD IERIIMPGVV HWQSPHMHAY YPALTSWPSL LGDMLADAIN ENSBTAP00000013083/1-658 PDSWDSIFGD IERIIMPGVV HWQSPHMHAY YPALTSWPSL LGDMLADAIN ENSTTRP00000015923/1-661 PDSWDSIFGD IERIIMPGVV HWQSPHMHAY YPALTSWPSL LGDMLADAIN bmy_13054T0/1-535 PDSWDSIFGD IERIIMPG-- ---------- ---------- ---------- BACU003211/1-668 PDSWDSIFGD IERIIMPGVV HWQSPHMHAY YPALTSWPSL LGDMLADAIN 101 150 ENSP00000267845/1-662 CLGFTWASSP ACTELEMNVM DWLAKMLGLP EHFLHHHPSS QGGGVLQSTV ENSBTAP00000013083/1-658 CLGFTWASSP ACTELEMNVM DWLAKMLGLP EHFLHHHPGS QGGGVLQSTV ENSTTRP00000015923/1-661 CLGFTWASSP VCTELEMNVM DWLAKMLGLP EHFLHHHPGS QGGGVLQSTV bmy_13054T0/1-535 ---------- ---------- ---------- ---------- -------STV BACU003211/1-668 CLGFTWASSP VCTELEMNVM DWLAKMLGLP EHFLHHHPGS QGGGVLQSTV 151 200 ENSP00000267845/1-662 SESTLIALLA ARKNKILEMK TSEPDADESC LNARLVAYAS DQAHSSVEKA ENSBTAP00000013083/1-658 SESTLIALLA ARKNKILEMK ASEPEADESF LNARLVAYAS DQAHSSVEKA ENSTTRP00000015923/1-661 SESTLIALLA ARKNKILEIK ASEPGADESS LNARLVAYAS DQAHSSVEKA bmy_13054T0/1-535 SESTLIALLA ARKNKILEIK ASEPGADESS LNARLVAYAS DQAHSSVEKA BACU003211/1-668 SESTLIALLA ARKNKILEIK ASEPGADESS LNARLVAYAS DQAHSSVEKA 201 250 ENSP00000267845/1-662 GLISLVKMKF LPVDDNFSLR GEALQKAIEE DKQRGLVPVF VCATLGTTGV ENSBTAP00000013083/1-658 GLISLVKMKF LPVDENFSLR GEALQKAIKE DRERGLVPIF VCATLGTTGV ENSTTRP00000015923/1-661 GLISLVKMKF LPVDDNFSLR GEVLQKAIEE DRAQGLVPVF VCATLGTTGV bmy_13054T0/1-535 GLISLVKMKF LPVDDDFSLR GEVLQKAIKE DREQGLVPVF VCATLGTTGV BACU003211/1-668 GLISLVKMKF LPVDDDFSLR GEVLQKAIKE DREQGLVPVF VCATLGTTGV 251 300 ENSP00000267845/1-662 CAFDCLSELG PIC------- AREGLWLHID AAYAGTAFLC PEFRGFLKGI ENSBTAP00000013083/1-658 CAFDCLSELG PIC------- AREGLWLHID AAYAGTAFLC PEFRGFLKGI ENSTTRP00000015923/1-661 CAFDRLSELG PIC------- ANEGLWLHID AAYAGTAFLC PEFRGFLKGI bmy_13054T0/1-535 CAFDRLSELG PIC------- ANEGLWLHID AAYAGTAFLC PEFRGLLKGI BACU003211/1-668 CAFDCLSELG PISQQLDGPG ANEGLWLHID AAYAGTAFLC PEFRGFLKGI 301 350 ENSP00000267845/1-662 EYADSFTFNP SKWMMVHFDC TGFWVKDKYK LQQTFSVNPI YLRHANSGVA ENSBTAP00000013083/1-658 EYADSFTFNP SKWMMVHFDC TGFWVKDKYK LQQTFSVDPV YLRHADSGVA ENSTTRP00000015923/1-661 EYADSFTFNP SKWMMVHFDC TGFWVKDKYK LQQTFSVNPV YLRHADSGAA bmy_13054T0/1-535 EYADSFTFNP SKWMMVHFDC TGFWVKDKYK LQQTFSVNPV YLRHADSGAA BACU003211/1-668 EYADSFTFNP SKWMMVHFDC TGFWVKDKYK LQQTFSVNPV YLRHADSGAA 351 400 ENSP00000267845/1-662 TDFMHWQIPL SRRFRSVKLW FVIRSFGVKN LQAHVRHGTE MAKYFESLVR ENSBTAP00000013083/1-658 TDFMHWQIPL SRRFRSIKLW FVIRSFGVKN LQAHVRHGTE MAKYFESLVR ENSTTRP00000015923/1-661 TDFMHWQIPL SRRFRSIKLW FVIRSFGVKN LQAHIRHGTE MAKYFESLVR bmy_13054T0/1-535 TDFMHWQIPL SRRFRSIKLW FVIRSFGVKN LQAHIRHGTE MAKYFESLVR BACU003211/1-668 TDFMHWQIPL SRRFRSIKLW FVIRSFGVKN LQAHIRHGTE MAKYFESLVR 401 450 ENSP00000267845/1-662 NDPSFEIPAK RHLGLVVFRL KGPNCLTENV LKEIAKAGRL FLIPATIQDK ENSBTAP00000013083/1-658 NDPFFEIPAK RHLGLVVFRL KGPNCLTESV LKEIAKAGRL FLIPATIQDK ENSTTRP00000015923/1-661 NEPFFEIPAK RHLGLVVFRL KGPNCLTESV LKEIAKAGRL FLIPATIQDK bmy_13054T0/1-535 NEPFFEIPAK RHLGLVVFRL KGPNCLTESV LKEIAKAGRL FLIPATIQDK BACU003211/1-668 NEPFFEIPAK RHLGLVVFRL KGPNCLTERV LKEIAKAGRL FLIPATIQDK 451 500 ENSP00000267845/1-662 LIIRFTVTSQ FTTRDDILRD WNLIRDAATL ILSQHCTSQP SPRVGNLISQ ENSBTAP00000013083/1-658 LIIRFTVTSQ FTTRDDILRD WNLIQDAATL ILSQHCTSQP SPQGANLILQ ENSTTRP00000015923/1-661 LIIRFTVTSQ FTTRDDILRD WNLIHDAATL ILSQHCTSQP SPQGGNLIPQ bmy_13054T0/1-535 LIIRFTVTSQ FTTRDDILRD WNLIHDAATL ILSQHCTSQP SPQGGNLIPQ BACU003211/1-668 LIIRFTVTSQ FTTRDDILRD WNLIHDAATL VLSQHCTSQP SPQGGNLIPQ 501 550 ENSP00000267845/1-662 IRGARAWACG TSLQSVSGAG DDPVQARKII KQPQRVGAGP MKRENGLHLE ENSBTAP00000013083/1-658 TRGPRALAKE MSFPSVNGAG DDPAHSRKIV MQPPRVGASP V----SRHLE ENSTTRP00000015923/1-661 TRGPRALAKE LSFPSVSRAG DDPDQARKVI KQPPHVGASP VRGEGSRHIE bmy_13054T0/1-535 TRGPRALAKE LSFPSVSGAG DDPVQARKII TQPPHVGASP VRGEGSCHLE BACU003211/1-668 TRGPRALAKE LSFPSVSGAG DDPAQARKII TQPPHVGASP VRGEGSCHLE 551 600 ENSP00000267845/1-662 TLLDPVDDCF SEEAPDATKH KLSSFLFSYL SVQTKKKTVR SLSCNSVPVS ENSBTAP00000013083/1-658 TLLDPLDDCF SEEAPDVTEH KLSSFLFSYL SVQNKRKAVR SLSCNSVPVS ENSTTRP00000015923/1-661 TLLDPLDDCF SEEAPDLTKH KLSSFLFNYL SVQNK-KAVR SLSCNSVPVG bmy_13054T0/1-535 TLLDPLDDCF SEEAPDLTKH KLSSFLFNYL SVQNKKKAVR SLSCNSVPVG BACU003211/1-668 TLLDPLDDCF SEEAPDLTKH KLSSFLFSYL SVQNKKKAVR SLSCNSVPVG 601 650 ENSP00000267845/1-662 AQKPLPTEAS VKNGGSSRVR IFSRFPEDMM MLKKSAFKKL IKFYSVPSFP ENSBTAP00000013083/1-658 AQKQLTTEGS VKNGSSSRVR IFSRFPEEVM MLKKSAFKKL IKFYSVPNFP ENSTTRP00000015923/1-661 DQKPLPTDGS VKNGGSCRVR IFSRFPEEMM MLKKSAFRKL IKFYSVPNFP bmy_13054T0/1-535 DQKPLPTDGS VKNGGSSRVR V--------- ---------- ---------- BACU003211/1-668 DQKPLPTDGS VKNGGSSRVR IFSRFPEEMM MLKKSAFKKL IKFYSVPSFP 651 700 ENSP00000267845/1-662 ECSSQCGLQL PCCPLQAMV ENSBTAP00000013083/1-658 ECSSQCGLQL PCCPLQAMV ENSTTRP00000015923/1-661 ECSSQCGLQL PCCPLQATV bmy_13054T0/1-535 ---------- --------- BACU003211/1-668 ECSSPCGLQL SCCPLQAMV