KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:48:41 2014 Check: 00 .. Name: ENSP00000355319/1-399 Len: 399 Check: 8362 Weight: 1.00 Name: ENSBTAP00000013093/1-398 Len: 399 Check: 3489 Weight: 1.00 Name: bmy_03496T0/1-342 Len: 399 Check: 2610 Weight: 1.00 Name: ENSTTRP00000003049/1-399 Len: 399 Check: 7305 Weight: 1.00 // 1 50 ENSP00000355319/1-399 MERKNPSRES PRRLSAKVGK GTEMKKVARQ LGMAAAESDK DSGFSDGSSE ENSBTAP00000013093/1-398 MERKNPSREG SRRLSAKPSK GSEMKKAARQ LGLAAAESDK DSGFSDGSSE bmy_03496T0/1-342 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003049/1-399 MERKNPSREG SRRLSAKLSK GPEMKKVSRQ LGVAAAESDK DSGFSDGSSE 51 100 ENSP00000355319/1-399 CLSSAEQMES EDMLSALGWS REDRPRQNSK TAKNAFPTLS PMVVMKNVLV ENSBTAP00000013093/1-398 CLSSAEQMES EDMLSALGWS REDKPRPSSK PASGAFPTLS PMVVMKNVLV bmy_03496T0/1-342 -------MES EDVLSALGWS REDRPRPSAK PASGAFPTLA PMVVMKNVLV ENSTTRP00000003049/1-399 CLSSAEQMES EDMLSALGWS REDRPRPSAK PASGAFPTLA PMVVMKNVLV 101 150 ENSP00000355319/1-399 KQGSSSSQLQ SWTVQPSFEV ISAQPQLLFL HPPVPSPVSP CHTGEKKSDS ENSBTAP00000013093/1-398 KQGSSSSQLQ SWTVQPSFEV ISAQPQLLFL HPPVPSPVSP GHAGEKKSDS bmy_03496T0/1-342 KQGGSSSQLQ SWSVQPSFEV ISAQPQLLFL HPPVPSPVSP CHAGEKKSDS ENSTTRP00000003049/1-399 KQGSSSSQLQ SWSVQPSFEV ISAQPQLLFL HPPVPSPVSP CHAGEKKSDS 151 200 ENSP00000355319/1-399 RNYLPILNSY TKIAPHPGKR GLSLGPEEKG TSGVQKKICT ERLGPSLSSS ENSBTAP00000013093/1-398 RNYLPILNSY TKIAPHPGKR GPAHSAEER- EGGMQKKVCT ERLGSGLSAR bmy_03496T0/1-342 RNYLPILNSY TKIAPHPGKR GLSLSPEERG EGGMQKKICT ERLGPSLSSS ENSTTRP00000003049/1-399 RNYLPILNSY TKIAPHPGKR GLSLSPEERG EGGMQKKICT ERLGPSLSSS 201 250 ENSP00000355319/1-399 EPTKAGAVPS SPSTPAPPSA KLAEDSALQG VPSLVAGGSP QTLQPVSSSH ENSBTAP00000013093/1-398 EPTKTGAGPP QPPTPAPPST KLAEDSALQG VPSLVAGGSP QTLQPVSSSH bmy_03496T0/1-342 EPTKTGAGPS GPPTPAPPST KLAEDSALQG VPCLVAGGSP QTLQPVSSSH ENSTTRP00000003049/1-399 EPTKTGAGPP GPPTPAPPST KLAEDSALQG VPCLVAGGSP QTLQPVSSSH 251 300 ENSP00000355319/1-399 VAKAPSLTFA SPASPVCASD STLHGLESNS PLSPLSANYS SPLWAAEHLC ENSBTAP00000013093/1-398 VAKAPSLTFA SPASPVCASD STLHGVESSS PLSPPAASYS SALWAAEHFC bmy_03496T0/1-342 VAKAPSLTFA SPASPVCASD STLHGMESNS PLSPLSASYS SPLWAAEHLC ENSTTRP00000003049/1-399 VAKAPSLTFA SPASPVCASD STLHGMESNS PLSPLSASYS SPLWAAEHLS 301 350 ENSP00000355319/1-399 RSPDIFSEQR QSKHRRFQNT LVVLHKSGLL EITLKTKELI RQNQATQVEL ENSBTAP00000013093/1-398 RSPDSFPEQR QSKHRRFQNT LVVLHKSGLL EITLKTKELI RQNQATQVEL bmy_03496T0/1-342 RSPDSLSEQR QSKHRRFQNT LVVLHKSGLL EITLKTKELI RQNQATQVEL ENSTTRP00000003049/1-399 RSPDSFSEQR QSKHRRFQNT LVVLHKSGLL EITLKTKELI RQNQATQVEL 351 400 ENSP00000355319/1-399 DQLKEQTQLF IEATKSRAPQ AWAKLQASLT PGSSNTGSDL EAFSDHPAI ENSBTAP00000013093/1-398 DQLKEQTRLF IEATKSRAPQ AWARLQASLS SGSGHTGSDL EAFSEQPDI bmy_03496T0/1-342 DQLKEQTRLF IEAAKSRAPQ AWAKLQASLT SGSGHTGSDL EAFSDQPDI ENSTTRP00000003049/1-399 DQLKEQTRLF IEAAKSRAPQ AWAKLQASLT SGSGHPGSDL EAFSDQPDI