KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:48:42 2014 Check: 00 ..
Name: bmy_16716T0/1-237 Len: 500 Check: 2541 Weight: 1.00
Name: BACU007054/1-156 Len: 500 Check: 4194 Weight: 1.00
Name: ENSTTRP00000013899/1-397 Len: 500 Check: 9861 Weight: 1.00
Name: ENSP00000225899/1-448 Len: 500 Check: 3534 Weight: 1.00
Name: ENSBTAP00000013107/1-405 Len: 500 Check: 2346 Weight: 1.00
//
1 50
bmy_16716T0/1-237 ---------- ---------- ---------- ---------- ----------
BACU007054/1-156 MGLADTGNSG SCSLSHTTSN CSSASVKSCP QSSSVCSS-- SCRPELCLGY
ENSTTRP00000013899/1-397 ---------- ------MTSN CSPASIKSCP PSPSVCSSST SCRLELCLGY
ENSP00000225899/1-448 ---------- -MTSSCCVTN NLQASLKSCP RPASVCSSGV NCRPELCLGY
ENSBTAP00000013107/1-405 ---------- ---------- ---------- ---------M SCQPEWYLGY
51 100
bmy_16716T0/1-237 ---------- ---------- ---------- ---------- ----------
BACU007054/1-156 VCQPGMCMPS VCTPTPYRPA TCLSKAHLAS SCQPSSCRPT SRISSSMGSY
ENSTTRP00000013899/1-397 VCQPGMCMPS VCAPTPYRPA TCLSKA-LAS SCQAA----- SRSSGSTGSY
ENSP00000225899/1-448 VCQPMACLPS VCLPTTFRPA SCLSKTYLSS SCQAA----- SGISGSMGPG
ENSBTAP00000013107/1-405 ICQPGMCVPS LSVSTTYYPT ---------- ---------- SSIFSSMGSN
101 150
bmy_16716T0/1-237 ---------- ---------- ---------- ---------- ----------
BACU007054/1-156 SPYFEGSFNG NEKETMQLLN NHLASYLERV QRLERDNAQL ESRIRDASQS
ENSTTRP00000013899/1-397 SRYFEGSFNG DEKETMQFLN NHLASYLERV RQLERDNAQL ESRIRDASRS
ENSP00000225899/1-448 SWYSEGAFNG NEKETMQFLN DRLASYLTRV RQLEQENAEL ESRIQEASHS
ENSBTAP00000013107/1-405 SLFYESVFSS NERETLQLLN NRLAAYLERV RQLEQENVEL ERQLQEACEF
151 200
bmy_16716T0/1-237 ---------- ---------- ---------- ---------- ----------
BACU007054/1-156 QAPALGPD-- ---------- ---------- ---------- ----------
ENSTTRP00000013899/1-397 RAPALGPD-Q SYFKTIEELQ RKVLYTEAEN ARMIVHVDNA RVAADVFRTK
ENSP00000225899/1-448 QVLTMTPDYQ SHFRTIEELQ QKILCTKAEN ARMVVNIDNA KLAADDFRAK
ENSBTAP00000013107/1-405 QEPTVGPNYF RYFQIIEELQ QKILYSKAEN ARIVVQIDNT KLAADDFRSK
201 250
bmy_16716T0/1-237 --MELAMWQL VEADTSSLPR VLDELTLCKA DLETQVESLK EELMCLKGVR
BACU007054/1-156 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000013899/1-397 YEMGLAMWQL VEADTSSLCR VLDELTLCKA DLEMQVESLK EELMCLKKNH
ENSP00000225899/1-448 YEAELAMRQL VEADINGLRR ILDDLTLCKA DLEAQVESLK EELMCLKKNH
ENSBTAP00000013107/1-405 YEMELGLRQL VEADTNGLRR ILDELTLCKA DLEMQVESLK EELMCLKKNH
251 300
bmy_16716T0/1-237 VEPKGPRDAA EWLQSSQGPS KAEIFSILCS IFSHLLGEEV DALRCQLGDR
BACU007054/1-156 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000013899/1-397 ---------- ---------- ---------- ------EEEV DAL-CQLGDR
ENSP00000225899/1-448 ---------- ---------- ---------- ------EEEV GSLRCQLGDR
ENSBTAP00000013107/1-405 ---------- ---------- ---------- ------EEEV GALRCQLGDR
301 350
bmy_16716T0/1-237 LNVEVDAATP VDLNRVPEET WCQYGAPVEN NHRD------ --MEELNQQV
BACU007054/1-156 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000013899/1-397 LNVDVDAVTP VDLNRVLEEM WCQYGALVET NHRDMEEWFT RQMEALNQQV
ENSP00000225899/1-448 LNIEVDAAPP VDLTRVLEEM RCQYEAMVEA NRRDVEEWFN MQMEELNQQV
ENSBTAP00000013107/1-405 LNIEVDAVSP VDLNKVLEEM RCRYEALVET NRRDVEEWFN KQMEELNQQV
351 400
bmy_16716T0/1-237 ATSSEQLQSY QSDISDLRRT VNTLEIELQA QHSL--LWIS GSTEYRCRHP
BACU007054/1-156 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000013899/1-397 ATSSEQLQSY QSDINDLRRT VNTLEIELQA RHSLRDSLES TLAETEARYS
ENSP00000225899/1-448 ATSSEQLQNY QSDIIDLRRT VNTLEIELQA QHSLRDSLEN TLTESEARYS
ENSBTAP00000013107/1-405 VTSSEQLQSY QSDIIDLKRT VNTLEIELQT QHSLRDSLEN TLTETEARYG
401 450
bmy_16716T0/1-237 GRRRGKR--- --KRGEEGDG EGEEDAAGGG GPDLATTIAC PADQLRDKRA
BACU007054/1-156 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000013899/1-397 SQLAQMQCLI TNLEVQLADI HCDLERQSQE YRVLLDVQAR LEFEINTYRG
ENSP00000225899/1-448 SQLAQMQCMI TNVEAQLAEI RADLERQNQE YQVLLDVRAR LEGEINTYRS
ENSBTAP00000013107/1-405 SQLAQMQGLV TNVESQLAEI RCDLERQNQE YRVLLDVRAR LEAEINTYRG
451 500
bmy_16716T0/1-237 MFQI------ ---------- ---------- ---------- ----------
BACU007054/1-156 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000013899/1-397 LLESEDC--- ---------- ---------- ---------- ----------
ENSP00000225899/1-448 LLENEDCKLP CNPCSTPSCT TCVPSPCVPR TVCVPRTVGM PCSPCPQGRY
ENSBTAP00000013107/1-405 LLDSEDCKLP GNPCSTPSQP PCAPAPSVPR TLCVPRTVCV PCVPCHPSCH