KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:48:42 2014 Check: 00 .. Name: bmy_16716T0/1-237 Len: 500 Check: 2541 Weight: 1.00 Name: BACU007054/1-156 Len: 500 Check: 4194 Weight: 1.00 Name: ENSTTRP00000013899/1-397 Len: 500 Check: 9861 Weight: 1.00 Name: ENSP00000225899/1-448 Len: 500 Check: 3534 Weight: 1.00 Name: ENSBTAP00000013107/1-405 Len: 500 Check: 2346 Weight: 1.00 // 1 50 bmy_16716T0/1-237 ---------- ---------- ---------- ---------- ---------- BACU007054/1-156 MGLADTGNSG SCSLSHTTSN CSSASVKSCP QSSSVCSS-- SCRPELCLGY ENSTTRP00000013899/1-397 ---------- ------MTSN CSPASIKSCP PSPSVCSSST SCRLELCLGY ENSP00000225899/1-448 ---------- -MTSSCCVTN NLQASLKSCP RPASVCSSGV NCRPELCLGY ENSBTAP00000013107/1-405 ---------- ---------- ---------- ---------M SCQPEWYLGY 51 100 bmy_16716T0/1-237 ---------- ---------- ---------- ---------- ---------- BACU007054/1-156 VCQPGMCMPS VCTPTPYRPA TCLSKAHLAS SCQPSSCRPT SRISSSMGSY ENSTTRP00000013899/1-397 VCQPGMCMPS VCAPTPYRPA TCLSKA-LAS SCQAA----- SRSSGSTGSY ENSP00000225899/1-448 VCQPMACLPS VCLPTTFRPA SCLSKTYLSS SCQAA----- SGISGSMGPG ENSBTAP00000013107/1-405 ICQPGMCVPS LSVSTTYYPT ---------- ---------- SSIFSSMGSN 101 150 bmy_16716T0/1-237 ---------- ---------- ---------- ---------- ---------- BACU007054/1-156 SPYFEGSFNG NEKETMQLLN NHLASYLERV QRLERDNAQL ESRIRDASQS ENSTTRP00000013899/1-397 SRYFEGSFNG DEKETMQFLN NHLASYLERV RQLERDNAQL ESRIRDASRS ENSP00000225899/1-448 SWYSEGAFNG NEKETMQFLN DRLASYLTRV RQLEQENAEL ESRIQEASHS ENSBTAP00000013107/1-405 SLFYESVFSS NERETLQLLN NRLAAYLERV RQLEQENVEL ERQLQEACEF 151 200 bmy_16716T0/1-237 ---------- ---------- ---------- ---------- ---------- BACU007054/1-156 QAPALGPD-- ---------- ---------- ---------- ---------- ENSTTRP00000013899/1-397 RAPALGPD-Q SYFKTIEELQ RKVLYTEAEN ARMIVHVDNA RVAADVFRTK ENSP00000225899/1-448 QVLTMTPDYQ SHFRTIEELQ QKILCTKAEN ARMVVNIDNA KLAADDFRAK ENSBTAP00000013107/1-405 QEPTVGPNYF RYFQIIEELQ QKILYSKAEN ARIVVQIDNT KLAADDFRSK 201 250 bmy_16716T0/1-237 --MELAMWQL VEADTSSLPR VLDELTLCKA DLETQVESLK EELMCLKGVR BACU007054/1-156 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013899/1-397 YEMGLAMWQL VEADTSSLCR VLDELTLCKA DLEMQVESLK EELMCLKKNH ENSP00000225899/1-448 YEAELAMRQL VEADINGLRR ILDDLTLCKA DLEAQVESLK EELMCLKKNH ENSBTAP00000013107/1-405 YEMELGLRQL VEADTNGLRR ILDELTLCKA DLEMQVESLK EELMCLKKNH 251 300 bmy_16716T0/1-237 VEPKGPRDAA EWLQSSQGPS KAEIFSILCS IFSHLLGEEV DALRCQLGDR BACU007054/1-156 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013899/1-397 ---------- ---------- ---------- ------EEEV DAL-CQLGDR ENSP00000225899/1-448 ---------- ---------- ---------- ------EEEV GSLRCQLGDR ENSBTAP00000013107/1-405 ---------- ---------- ---------- ------EEEV GALRCQLGDR 301 350 bmy_16716T0/1-237 LNVEVDAATP VDLNRVPEET WCQYGAPVEN NHRD------ --MEELNQQV BACU007054/1-156 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013899/1-397 LNVDVDAVTP VDLNRVLEEM WCQYGALVET NHRDMEEWFT RQMEALNQQV ENSP00000225899/1-448 LNIEVDAAPP VDLTRVLEEM RCQYEAMVEA NRRDVEEWFN MQMEELNQQV ENSBTAP00000013107/1-405 LNIEVDAVSP VDLNKVLEEM RCRYEALVET NRRDVEEWFN KQMEELNQQV 351 400 bmy_16716T0/1-237 ATSSEQLQSY QSDISDLRRT VNTLEIELQA QHSL--LWIS GSTEYRCRHP BACU007054/1-156 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013899/1-397 ATSSEQLQSY QSDINDLRRT VNTLEIELQA RHSLRDSLES TLAETEARYS ENSP00000225899/1-448 ATSSEQLQNY QSDIIDLRRT VNTLEIELQA QHSLRDSLEN TLTESEARYS ENSBTAP00000013107/1-405 VTSSEQLQSY QSDIIDLKRT VNTLEIELQT QHSLRDSLEN TLTETEARYG 401 450 bmy_16716T0/1-237 GRRRGKR--- --KRGEEGDG EGEEDAAGGG GPDLATTIAC PADQLRDKRA BACU007054/1-156 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013899/1-397 SQLAQMQCLI TNLEVQLADI HCDLERQSQE YRVLLDVQAR LEFEINTYRG ENSP00000225899/1-448 SQLAQMQCMI TNVEAQLAEI RADLERQNQE YQVLLDVRAR LEGEINTYRS ENSBTAP00000013107/1-405 SQLAQMQGLV TNVESQLAEI RCDLERQNQE YRVLLDVRAR LEAEINTYRG 451 500 bmy_16716T0/1-237 MFQI------ ---------- ---------- ---------- ---------- BACU007054/1-156 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013899/1-397 LLESEDC--- ---------- ---------- ---------- ---------- ENSP00000225899/1-448 LLENEDCKLP CNPCSTPSCT TCVPSPCVPR TVCVPRTVGM PCSPCPQGRY ENSBTAP00000013107/1-405 LLDSEDCKLP GNPCSTPSQP PCAPAPSVPR TLCVPRTVCV PCVPCHPSCH