KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:48:42 2014 Check: 00 .. Name: ENSP00000296161/1-740 Len: 752 Check: 9764 Weight: 1.00 Name: ENSBTAP00000013108/1-739 Len: 752 Check: 517 Weight: 1.00 Name: ENSTTRP00000012721/1-738 Len: 752 Check: 9189 Weight: 1.00 Name: bmy_03227T0/1-743 Len: 752 Check: 2391 Weight: 1.00 Name: BACU020078/1-739 Len: 752 Check: 8197 Weight: 1.00 // 1 50 ENSP00000296161/1-740 ----MASHLR PPSPLLVRVY KSGPRVRRKL ESYFQSSKSS GGGECTVSTQ ENSBTAP00000013108/1-739 ----MASSLC PPSPLLVRAS HPCTRLQWKL EKYFQ-SRES GGGECTVLAL ENSTTRP00000012721/1-738 ----MASNLC PPSPLLVRVS HPGTRLPWKL EKYFQ-SRES GGGECIVQAR bmy_03227T0/1-743 MRRAMASNLC PPSPLLVRVS HPGTRLPWKL EKYFQ-SRES GGGECTVRAL BACU020078/1-739 ----MASNLC PPSPLLVRVS HPGTRLTWKL EKYFQ-SRES GGGECTVQAL 51 100 ENSP00000296161/1-740 EHEAPG--TF RVEFSERAAK ERVLKKGEHQ ILVDEKPVPI FLVPTENSIK ENSBTAP00000013108/1-739 DPSDPNSNTF RVQFNKRAGK DGVLKKGKHQ IVVNNQPVTI FLEPNENAEE ENSTTRP00000012721/1-738 DRNDPNSDTF RVQFVHRASK EGVLKKGKHQ IVVDNKPVTI FLEPNDNAAE bmy_03227T0/1-743 DRNDPNSDTF RVQFVQRASK EGVLKKGKHQ IVVDNKPVTV FLEPNENAVE BACU020078/1-739 DRNDPNSDTF RVQFVQRASK EGVLKKGKHQ IVVANKPVTV FLEPDENAVE 101 150 ENSP00000296161/1-740 KNTRPQISSL TQSQAETPSG DMHQHEGHIP NAVDSCLQKI FLTVTADLNC ENSBTAP00000013108/1-739 KKTI--MSSS TQPQKGARHG EKPPNVKDIH NAVDSCLPKI FLTVTAELNC ENSTTRP00000012721/1-738 -NTR--MSSL TQSQKGASPG EKHSNEKDIS SAVDSCVQKI FLTVTAELNC bmy_03227T0/1-743 KNTR--KSSL TQSRKGARPG EKHPDEKDIS SAVDSCVQKI FLTVTAELNC BACU020078/1-739 KNTR--MSSL TQSRKGARPG EKHPNEKDIS SIVDSCVQKI FLTVTADLNC 151 200 ENSP00000296161/1-740 NLFSKEQRAY ITTLCPSIRK MEGHDGIEKV CGDFQDIERI HQFLSEQFLE ENSBTAP00000013108/1-739 QLFSKEQRDL ITVHCPNVKR VKDHDGTEKI CSNFRDIEKV HGFLSELLLE ENSTTRP00000012721/1-738 HLFSEEQREH IAILCPSVER VKGHEGIEKV RGDFRDIEKI HGFLSEQLLE bmy_03227T0/1-743 HLFSEEQREH IAILCPSVER VKGHEGIEKV RGDFRDIEKI HGFLSEHLLE BACU020078/1-739 HLFSEEQREH IAILCPNVER VKGHEGIEKV RGDFRDIEKI HGFLSEHLLE 201 250 ENSP00000296161/1-740 SEQKQQFSPS MTERKPLSQQ ERDSCISPSE PETKAEQKSN YFEVPLPYFE ENSBTAP00000013108/1-739 REQKHESSPL TSEREPLSQQ DRNSCVSPFE PESRSEEKSC RFEVPLAFFE ENSTTRP00000012721/1-738 KEQKRESSPL TTEREPLHQQ DGNSCVSPSE PKTRSEEKSN HFEVPLAFFE bmy_03227T0/1-743 KEQKRESSPL TTEREPLHQQ DGNSCVSPSE PKTRSEEKNN RFEVPLAFFE BACU020078/1-739 KEQKRESSPL TTEREPLDQQ DGNSGVSPSE PKTRSEEKNN RFEVPLALFE 251 300 ENSP00000296161/1-740 YFKYICPDKI NSIEKRFGVN IEIQESSPNM VCLDFTSSRS GDLEAARESF ENSBTAP00000013108/1-739 YFTHSCPDKI ASIEKKFGTK IKSQASSPNM VYLDFTSSRS GDLEAAHKNF ENSTTRP00000012721/1-738 YFTYTCPDKI YSIEKMFGIK IKTQKSSPNM VCLDITSSQS GNLEAACESF bmy_03227T0/1-743 YFTHTCPDKI YSIEKRFGTK IKTQTGSPNM VYLDFTSSQS GNLEAARESF BACU020078/1-739 YFTYTCPGKI YSIEKRFGTK IKTLKSSPNM VYLDFTSSQS GNLEAARESF 301 350 ENSP00000296161/1-740 ASEFQKNTEP LKQECVSLAD SKQANKFKQE LNHQFTKLLI KEKGGELTLL ENSBTAP00000013108/1-739 VGEFQKCVET LKQECVAVAD SKQATKIKEE LNHHFAKLLI KEKGRELTLL ENSTTRP00000012721/1-738 VREFQKRVKT LKQECVTLAD SKQAHKIKQE LSHQFTRLLI KEKGGELTLL bmy_03227T0/1-743 VREFQKSVET LKQECVALAD SKQAHEIKQE LNHQFTKLLI KEKGGELTLL BACU020078/1-739 VRAFQKRVET LKQECVALAD SEQAHKIKQE LNHQFTKLLI KEKGGELTLL 351 400 ENSP00000296161/1-740 GTQDDISAAK Q----KISEA FVKIPVKLFA --ANYMMNVI EVDSAHYKLL ENSBTAP00000013108/1-739 GTADDISAAK DFLDSKNFES LVKPPVKILT --PKHMMKGI EVDTAHYKLL ENSTTRP00000012721/1-738 GTTYDIAAAK RFLASEISES LVEAPVKIST XXXXXXXXXX XXXXAHYK-L bmy_03227T0/1-743 GTAYDISAAK HFLASQISES LPKAPVKIVT --PKHMMNGI EVDTAHYKLL BACU020078/1-739 GTADDISAAK HFLASQISES LPKATVKIVT --PKHMMNGI EVDTAHYKLL 401 450 ENSP00000296161/1-740 ETELLQEISE IEKRYDICSK VSEKGQKTCI LFESKDRQVD LSVHAYASFI ENSBTAP00000013108/1-739 EAELSQEISK IEKKYNTQSN ILGINQKTCI QFEPKTKDLD LSIHAYSSFI ENSTTRP00000012721/1-738 EAEYFQEISQ IEKKYDTQSR VLGTSQK-YI LFEPKTKELD LSVHAYSSFI bmy_03227T0/1-743 EAELLQEISQ IEKKYDTQSK VLGTSQKICI LFEPKTKELD LSVHAYSSFI BACU020078/1-739 EAELLQEISQ IEKKYDTQSK VLRTSQKICI LFEPKTKELD LSVHAYSSFI 451 500 ENSP00000296161/1-740 DAFQHASCQL MREVLLLKSL GKERKHLHQT KFADDFRKRH PNVHFVLNQE ENSBTAP00000013108/1-739 DTYQYVSCQI TREVLSLKLL GKERKHLFGT KFSDDFRKRH PDIHFVLNRE ENSTTRP00000012721/1-738 DAYQHVSGQI MREVLLLKLL GKERKHLHGT KFSDDFRKRH PGVDFVLNQE bmy_03227T0/1-743 DAYQHVSCQI TREVLLLKLL GKETKHLHGT KFSDDFRKRH PDIDFVLNQE BACU020078/1-739 DAYQHVSCQI VREVLLLKLL GKETKHLHGT KFSDDFRKRH PDIDFVLNQE 501 550 ENSP00000296161/1-740 SMTLTGLPNH LAKAKQYVLK GGGMSSLAGK KLKEGHETPM DIDSDDSKAA ENSBTAP00000013108/1-739 SMTLIGLPNH LTKAKQYVLN RCGVSPSATE KW---NETLM DTDSHNSKTA ENSTTRP00000012721/1-738 SVTLIGLPNH LTKAKQYVLN RGGTSPLARE KW---NETPT DTDSNDSKTA bmy_03227T0/1-743 SMTLIGLPNH LTKAKQYVLN RGGMSPLARE KW---NETPT DTDSNDSKTA BACU020078/1-739 SMTLIGLPNH LTKAKQYVLN RGGMSPLARE KW---NETPT DTDSNDSKTA 551 600 ENSP00000296161/1-740 SPPLKGSVSS EASELDKKEK GICVICMDTI SNKKVLPKCK HEFCAPCINK ENSBTAP00000013108/1-739 PPTLQHPASS EVSEMN-EEQ DMCAICLNTI SNKQVLSKCK HKFCSPCIQA ENSTTRP00000012721/1-738 SPTSQRSASS EVSEVD-KEK DICSICLNTI SNRQVLPKCK HDFCSPCIKK bmy_03227T0/1-743 SPTLQRSASS EVSEVD-KEK DICTICLNTI SNRKVLSKCK HDFCSPCINK BACU020078/1-739 SPTLQRSASS EVSEVD-KEK DICTICLNTI SNRKVLSKCK HDFCSPCINK 601 650 ENSP00000296161/1-740 AMSYKPICPT CQTSYGIQKG NQPEGSMVFT VSRDSLPGYE SFGTIVITYS ENSBTAP00000013108/1-739 AFSYKPVCPV CQTSYGVQKG NQPDGRMSTF VVRSSLPGYE SCGTIEITYD ENSTTRP00000012721/1-738 ALSYKPVCPL CQTSYGVQKG NQPDGNMNVI FKRDSLPGYE SHGTIVITYS bmy_03227T0/1-743 ALSYKPVCPL CQTSYGVQKG NQPDGNMHVV LRRDSLPGYE SCGTIVITYS BACU020078/1-739 ALSYKPVCPL CQTSYGVQKG NQPDGNMHVV FKRDSLPGYE YCGTIVITYS 651 700 ENSP00000296161/1-740 MKAGIQTEEH PNPGKRYPGI QRTAYLPDNK EGRKVLKLLY RAFDQKLIFT ENSBTAP00000013108/1-739 IEGGIQTKEH PNPGERFSGI RRTAYLPDNK EGNEVLRLLR RAFDQKLIFT ENSTTRP00000012721/1-738 IEGGIQTKEH PNPGKRFSGI CRTAYLPDNE EGREVLHLLR RAFDEKLIFT bmy_03227T0/1-743 IEEGIQTKEH PNPGKRFSGI RRTAYLPDNK EGNEVLHLLR RAFNQKLIFT BACU020078/1-739 IEDGIQTKEH PNPGERFSGI CRTAYLPDNK EGNEVLHLLR RAFDQKLIFT 701 750 ENSP00000296161/1-740 VGYSRVLGVS DVITWNDIHH KTSRFGGPEM YGYPDPSYLK RVKEELKAKG ENSBTAP00000013108/1-739 VGESRTLGVS GVITWNDIHH KTSRTGGSQR YGYPDPDYLK RVKQELKDKG ENSTTRP00000012721/1-738 VGDSRVLGVS DVITWNDIHH KTSRFGGPER YGYPDPGYLK RVKQELKDKG bmy_03227T0/1-743 VGDSRVLGVS DVITWNDIHH KTSRFGGPER YGYPDPDYLK RVKQELKDKG BACU020078/1-739 VGDSRALGVS DVVTWNDIHH KTSRFGGPER YGYPDPDYLK RVKQELKDKG 751 800 ENSP00000296161/1-740 IE ENSBTAP00000013108/1-739 IE ENSTTRP00000012721/1-738 IE bmy_03227T0/1-743 IE BACU020078/1-739 IE