KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:48:43 2014 Check: 00 .. Name: bmy_13132T0/1-880 Len: 1230 Check: 3231 Weight: 1.00 Name: ENSP00000442318/1-1230 Len: 1230 Check: 371 Weight: 1.00 Name: ENSTTRP00000005333/1-1230 Len: 1230 Check: 371 Weight: 1.00 Name: ENSBTAP00000013112/1-1230 Len: 1230 Check: 371 Weight: 1.00 Name: BACU016450/1-1049 Len: 1230 Check: 1690 Weight: 1.00 // 1 50 bmy_13132T0/1-880 ---------- ---------- ---------- ---------- ---------- ENSP00000442318/1-1230 MASASYHISN LLEKMTSSDK DFRFMATNDL MTELQKDSIK LDDDSERKVV ENSTTRP00000005333/1-1230 MASASYHISN LLEKMTSSDK DFRFMATNDL MTELQKDSIK LDDDSERKVV ENSBTAP00000013112/1-1230 MASASYHISN LLEKMTSSDK DFRFMATNDL MTELQKDSIK LDDDSERKVV BACU016450/1-1049 ---------- ---------- ----MATNDL MTELQKDSIK LDDDSERKVV 51 100 bmy_13132T0/1-880 ---------- ---------- ---------- ---------- ---------- ENSP00000442318/1-1230 KMILKLLEDK NGEVQNLAVK CLGPLVSKVK EYQVETIVDT LCTNMLSDKE ENSTTRP00000005333/1-1230 KMILKLLEDK NGEVQNLAVK CLGPLVSKVK EYQVETIVDT LCTNMLSDKE ENSBTAP00000013112/1-1230 KMILKLLEDK NGEVQNLAVK CLGPLVSKVK EYQVETIVDT LCTNMLSDKE BACU016450/1-1049 KMILKLLEDK NGEVQNLAVK CLGPLVSKVK EYQVETIVDT LCTNMLSDKE 101 150 bmy_13132T0/1-880 ---------- ---------- ---------- ---------- ---------- ENSP00000442318/1-1230 QLRDISSIGL KTVIGELPPA SSGSALAANV CKKITGRLTS AIAKQEDVSV ENSTTRP00000005333/1-1230 QLRDISSIGL KTVIGELPPA SSGSALAANV CKKITGRLTS AIAKQEDVSV ENSBTAP00000013112/1-1230 QLRDISSIGL KTVIGELPPA SSGSALAANV CKKITGRLTS AIAKQEDVSV BACU016450/1-1049 QLRDISSIGL KTVIGELPPA SSGSALAANV CKKITGRLTS AIAKQEDVSV 151 200 bmy_13132T0/1-880 ---------- ---------- ---------- ---------- ---------- ENSP00000442318/1-1230 QLEALDIMAD MLSRQGGLLV NFHPSILTCL LPQLTSPRLA VRKRTIIALG ENSTTRP00000005333/1-1230 QLEALDIMAD MLSRQGGLLV NFHPSILTCL LPQLTSPRLA VRKRTIIALG ENSBTAP00000013112/1-1230 QLEALDIMAD MLSRQGGLLV NFHPSILTCL LPQLTSPRLA VRKRTIIALG BACU016450/1-1049 QLEALDIMAD MLS------- ---------- ---------- ---------- 201 250 bmy_13132T0/1-880 ---------- ---------- ---------- ---------- ---------- ENSP00000442318/1-1230 HLVMSCGNIV FVDLIEHLLS ELSKNDSMST TRTYIQCIAA ISRQAGHRIG ENSTTRP00000005333/1-1230 HLVMSCGNIV FVDLIEHLLS ELSKNDSMST TRTYIQCIAA ISRQAGHRIG ENSBTAP00000013112/1-1230 HLVMSCGNIV FVDLIEHLLS ELSKNDSMST TRTYIQCIAA ISRQAGHRIG BACU016450/1-1049 ---------- ---------- ---------- ---------- ---------- 251 300 bmy_13132T0/1-880 ---------- ---------- ---------- ---------- ---------- ENSP00000442318/1-1230 EYLEKIIPLV VKFCNVDDDE LREYCIQAFE SFVRRCPKEV YPHVSTIINI ENSTTRP00000005333/1-1230 EYLEKIIPLV VKFCNVDDDE LREYCIQAFE SFVRRCPKEV YPHVSTIINI ENSBTAP00000013112/1-1230 EYLEKIIPLV VKFCNVDDDE LREYCIQAFE SFVRRCPKEV YPHVSTIINI BACU016450/1-1049 ---------- ---------- ---------- ----RCPKEV YPHVSTIINI 301 350 bmy_13132T0/1-880 ---------- ---------- --MDADGGDD DDQGSDDEYS DDDDMSWKVR ENSP00000442318/1-1230 CLKYLTYDPN YNYDDEDEDE NAMDADGGDD DDQGSDDEYS DDDDMSWKVR ENSTTRP00000005333/1-1230 CLKYLTYDPN YNYDDEDEDE NAMDADGGDD DDQGSDDEYS DDDDMSWKVR ENSBTAP00000013112/1-1230 CLKYLTYDPN YNYDDEDEDE NAMDADGGDD DDQGSDDEYS DDDDMSWKVR BACU016450/1-1049 CLKYLTYDPN YNYDDEDEDE NAMDADGGDD DDQGSDDEYS DDDDMSWKVR 351 400 bmy_13132T0/1-880 RAAAKCLDAV VSTRHEMLPE FYKTVSPALI SRFKEREENV KADVFHAYLS ENSP00000442318/1-1230 RAAAKCLDAV VSTRHEMLPE FYKTVSPALI SRFKEREENV KADVFHAYLS ENSTTRP00000005333/1-1230 RAAAKCLDAV VSTRHEMLPE FYKTVSPALI SRFKEREENV KADVFHAYLS ENSBTAP00000013112/1-1230 RAAAKCLDAV VSTRHEMLPE FYKTVSPALI SRFKEREENV KADVFHAYLS BACU016450/1-1049 RAAAKCLDAV VSTRHEMLPE FYKTVSPALI SRFKEREENV KADVFHAYLS 401 450 bmy_13132T0/1-880 LLKQTRPVQS WLCDPDAMEQ GETPLTMLQS QFSHII---- -------VRY ENSP00000442318/1-1230 LLKQTRPVQS WLCDPDAMEQ GETPLTMLQS QVPNIVKALH KQMKEKSVKT ENSTTRP00000005333/1-1230 LLKQTRPVQS WLCDPDAMEQ GETPLTMLQS QVPNIVKALH KQMKEKSVKT ENSBTAP00000013112/1-1230 LLKQTRPVQS WLCDPDAMEQ GETPLTMLQS QVPNIVKALH KQMKEKSVKT BACU016450/1-1049 LLKQTRPVQS WLCDPDAMEQ GETPLTMLQS QVPNIVKALH KQMKEKSVKT 451 500 bmy_13132T0/1-880 GVCILASIRF I--------- --------GI IFSLNDKSSS SNLKIDALSC ENSP00000442318/1-1230 RQCCFNMLTE LVNVLPGALT QHIPVLVPGI IFSLNDKSSS SNLKIDALSC ENSTTRP00000005333/1-1230 RQCCFNMLTE LVNVLPGALT QHIPVLVPGI IFSLNDKSSS SNLKIDALSC ENSBTAP00000013112/1-1230 RQCCFNMLTE LVNVLPGALT QHIPVLVPGI IFSLNDKSSS SNLKIDALSC BACU016450/1-1049 RQCCFNMLTE LVNVLPGALT QHIPVLVPGI IFSLNDKSSS SNLKIDALSC 501 550 bmy_13132T0/1-880 LYVILCNHSP QVFHPHVQAL VPPVVACVGD PFYKITSEAL LVTQQLVKVI ENSP00000442318/1-1230 LYVILCNHSP QVFHPHVQAL VPPVVACVGD PFYKITSEAL LVTQQLVKVI ENSTTRP00000005333/1-1230 LYVILCNHSP QVFHPHVQAL VPPVVACVGD PFYKITSEAL LVTQQLVKVI ENSBTAP00000013112/1-1230 LYVILCNHSP QVFHPHVQAL VPPVVACVGD PFYKITSEAL LVTQQLVKVI BACU016450/1-1049 LYVILCNHSP QVFHPHVQAL VPPVVACVGD PFYKITSEAL LVTQQLVKVI 551 600 bmy_13132T0/1-880 RPLDQPSSFD ATPYIKDLFT CTIKRLKAAD IDQEVKERAI SCMGQIICNL ENSP00000442318/1-1230 RPLDQPSSFD ATPYIKDLFT CTIKRLKAAD IDQEVKERAI SCMGQIICNL ENSTTRP00000005333/1-1230 RPLDQPSSFD ATPYIKDLFT CTIKRLKAAD IDQEVKERAI SCMGQIICNL ENSBTAP00000013112/1-1230 RPLDQPSSFD ATPYIKDLFT CTIKRLKAAD IDQEVKERAI SCMGQIICNL BACU016450/1-1049 RPLDQPSSFD ATPYIKDLFT CTIKRLKAAD IDQEVKERAI SCMGQIICNL 601 650 bmy_13132T0/1-880 GDNLGSDLPN TLQIFLERLK NEITRLTTVK ALTLIAGSPL KIDLRPVLGE ENSP00000442318/1-1230 GDNLGSDLPN TLQIFLERLK NEITRLTTVK ALTLIAGSPL KIDLRPVLGE ENSTTRP00000005333/1-1230 GDNLGSDLPN TLQIFLERLK NEITRLTTVK ALTLIAGSPL KIDLRPVLGE ENSBTAP00000013112/1-1230 GDNLGSDLPN TLQIFLERLK NEITRLTTVK ALTLIAGSPL KIDLRPVLGE BACU016450/1-1049 GDNLGSDLPN TLQIFLERLK NEITRLTTVK ALTLIAGSPL KIDLRPVLGE 651 700 bmy_13132T0/1-880 GVPILASFLR KNQRALKLGT LSALDILIKN YSDSLTAAMI DAVLDELPPL ENSP00000442318/1-1230 GVPILASFLR KNQRALKLGT LSALDILIKN YSDSLTAAMI DAVLDELPPL ENSTTRP00000005333/1-1230 GVPILASFLR KNQRALKLGT LSALDILIKN YSDSLTAAMI DAVLDELPPL ENSBTAP00000013112/1-1230 GVPILASFLR KNQRALKLGT LSALDILIKN YSDSLTAAMI DAVLDELPPL BACU016450/1-1049 GVPILASFLR KNQRALKLGT LSALDILIKN YSDSLTAAMI DAVLDELPPL 701 750 bmy_13132T0/1-880 ISESDMHVSQ MAISFLTTLA KVYPSSLSKI SGSILNELIG LVRSPLLQGG ENSP00000442318/1-1230 ISESDMHVSQ MAISFLTTLA KVYPSSLSKI SGSILNELIG LVRSPLLQGG ENSTTRP00000005333/1-1230 ISESDMHVSQ MAISFLTTLA KVYPSSLSKI SGSILNELIG LVRSPLLQGG ENSBTAP00000013112/1-1230 ISESDMHVSQ MAISFLTTLA KVYPSSLSKI SGSILNELIG LVRSPLLQGG BACU016450/1-1049 ISESDMHVSQ MAISFLTTLA KVYPSSLSKI SGSILNELIG LVRSPLLQGG 751 800 bmy_13132T0/1-880 ALSAMLDFFQ ALVVTGTNNL GYMDLLRMLT GPVYSQSTAL THKQSYYSIA ENSP00000442318/1-1230 ALSAMLDFFQ ALVVTGTNNL GYMDLLRMLT GPVYSQSTAL THKQSYYSIA ENSTTRP00000005333/1-1230 ALSAMLDFFQ ALVVTGTNNL GYMDLLRMLT GPVYSQSTAL THKQSYYSIA ENSBTAP00000013112/1-1230 ALSAMLDFFQ ALVVTGTNNL GYMDLLRMLT GPVYSQSTAL THKQSYYSIA BACU016450/1-1049 ALSAMLDFFQ ALVVTGTNNL GYMDLLRMLT GPVYSQSTAL THKQSYYSIA 801 850 bmy_13132T0/1-880 KCVAALTRAC PKEGPAVVGQ FIQDVKNSRS TDSIRLLALL SLGEVGHHID ENSP00000442318/1-1230 KCVAALTRAC PKEGPAVVGQ FIQDVKNSRS TDSIRLLALL SLGEVGHHID ENSTTRP00000005333/1-1230 KCVAALTRAC PKEGPAVVGQ FIQDVKNSRS TDSIRLLALL SLGEVGHHID ENSBTAP00000013112/1-1230 KCVAALTRAC PKEGPAVVGQ FIQDVKNSRS TDSIRLLALL SLGEVGHHID BACU016450/1-1049 KCVAALTRAC PKEGPAVVGQ FIQDVKNSRS TDSIRLLALL SLGEVGHHID 851 900 bmy_13132T0/1-880 LSGQLELKSV ILEAFSSPSE EVKSAASYAL GSISVGNLPE YLPFVLQEIT ENSP00000442318/1-1230 LSGQLELKSV ILEAFSSPSE EVKSAASYAL GSISVGNLPE YLPFVLQEIT ENSTTRP00000005333/1-1230 LSGQLELKSV ILEAFSSPSE EVKSAASYAL GSISVGNLPE YLPFVLQEIT ENSBTAP00000013112/1-1230 LSGQLELKSV ILEAFSSPSE EVKSAASYAL GSISVGNLPE YLPFVLQEIT BACU016450/1-1049 LSGQLELKSV ILEAFSSPSE EVKSAASYAL GSISVGNLPE YLPFVLQEIT 901 950 bmy_13132T0/1-880 SQPKRQYLLL HSLKEIISSA SVVGLKPYVE NIWALLLKHC ECAEEGTRNV ENSP00000442318/1-1230 SQPKRQYLLL HSLKEIISSA SVVGLKPYVE NIWALLLKHC ECAEEGTRNV ENSTTRP00000005333/1-1230 SQPKRQYLLL HSLKEIISSA SVVGLKPYVE NIWALLLKHC ECAEEGTRNV ENSBTAP00000013112/1-1230 SQPKRQYLLL HSLKEIISSA SVVGLKPYVE NIWALLLKHC ECAEEGTRNV BACU016450/1-1049 SQPKRQYLLL HSLKEIISSA SVVGLKPYVE NIWALLLKHC ECAEEGTRNV 951 1000 bmy_13132T0/1-880 VAECLGKLTL IDPETLLPRL KGYLISGSSY ARSSVVTAVK FTISDHPQPI ENSP00000442318/1-1230 VAECLGKLTL IDPETLLPRL KGYLISGSSY ARSSVVTAVK FTISDHPQPI ENSTTRP00000005333/1-1230 VAECLGKLTL IDPETLLPRL KGYLISGSSY ARSSVVTAVK FTISDHPQPI ENSBTAP00000013112/1-1230 VAECLGKLTL IDPETLLPRL KGYLISGSSY ARSSVVTAVK FTISDHPQPI BACU016450/1-1049 VAECLGKLTL IDPETLLPRL KGYLISGSSY ARSSVVTAVK FTISDHPQPI 1001 1050 bmy_13132T0/1-880 DPLLKNCIGD FLKTLEDPDL NVRRVALVTF NSAAHNKPSL IRDLLDTVLP ENSP00000442318/1-1230 DPLLKNCIGD FLKTLEDPDL NVRRVALVTF NSAAHNKPSL IRDLLDTVLP ENSTTRP00000005333/1-1230 DPLLKNCIGD FLKTLEDPDL NVRRVALVTF NSAAHNKPSL IRDLLDTVLP ENSBTAP00000013112/1-1230 DPLLKNCIGD FLKTLEDPDL NVRRVALVTF NSAAHNKPSL IRDLLDTVLP BACU016450/1-1049 DPLLKNCIGD FLKTLEDPDL NVRRVALVTF NSAAHNKPSL IRDLLDTVLP 1051 1100 bmy_13132T0/1-880 HLYNETKVRK ELIREVEMGP FKHTVDDGLD IRKAAFECMY TLLDSCLDRL ENSP00000442318/1-1230 HLYNETKVRK ELIREVEMGP FKHTVDDGLD IRKAAFECMY TLLDSCLDRL ENSTTRP00000005333/1-1230 HLYNETKVRK ELIREVEMGP FKHTVDDGLD IRKAAFECMY TLLDSCLDRL ENSBTAP00000013112/1-1230 HLYNETKVRK ELIREVEMGP FKHTVDDGLD IRKAAFECMY TLLDSCLDRL BACU016450/1-1049 HLYNETKVRK ELIREVEMGP FKHTVDDGLD IRKAAFECMY TLLDSCLDRL 1101 1150 bmy_13132T0/1-880 DIFEFLNHVE DGLKDHYDIK MLTFLMLVRL STLCPSAVLQ RLDRLVEPLR ENSP00000442318/1-1230 DIFEFLNHVE DGLKDHYDIK MLTFLMLVRL STLCPSAVLQ RLDRLVEPLR ENSTTRP00000005333/1-1230 DIFEFLNHVE DGLKDHYDIK MLTFLMLVRL STLCPSAVLQ RLDRLVEPLR ENSBTAP00000013112/1-1230 DIFEFLNHVE DGLKDHYDIK MLTFLMLVRL STLCPSAVLQ RLDRLVEPLR BACU016450/1-1049 DIFEFLNHVE DGLKDHYDI- ---------- ---------- ---------- 1151 1200 bmy_13132T0/1-880 ATCTTKVKAN SVKQEFEKQD ELKRSAMRAV AALLTIPEAE KSPLMSEFQS ENSP00000442318/1-1230 ATCTTKVKAN SVKQEFEKQD ELKRSAMRAV AALLTIPEAE KSPLMSEFQS ENSTTRP00000005333/1-1230 ATCTTKVKAN SVKQEFEKQD ELKRSAMRAV AALLTIPEAE KSPLMSEFQS ENSBTAP00000013112/1-1230 ATCTTKVKAN SVKQEFEKQD ELKRSAMRAV AALLTIPEAE KSPLMSEFQS BACU016450/1-1049 -----KVKAN SVKQEFEKQD ELKRSAMRAV AALLTIPEAE KSPLMSEFQS 1201 1250 bmy_13132T0/1-880 QISSNPELAA IFESIQKDSS STNLESMDTS ENSP00000442318/1-1230 QISSNPELAA IFESIQKDSS STNLESMDTS ENSTTRP00000005333/1-1230 QISSNPELAA IFESIQKDSS STNLESMDTS ENSBTAP00000013112/1-1230 QISSNPELAA IFESIQKDSS STNLESMDTS BACU016450/1-1049 QISSNPELAA IFESIQKDSS STNLESMDTS