KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:48:44 2014 Check: 00 .. Name: ENSP00000399718/1-344 Len: 369 Check: 5403 Weight: 1.00 Name: ENSBTAP00000013114/1-344 Len: 369 Check: 5940 Weight: 1.00 Name: bmy_03848T0/1-323 Len: 369 Check: 7787 Weight: 1.00 Name: BACU008724/1-358 Len: 369 Check: 8044 Weight: 1.00 Name: ENSTTRP00000002736/1-344 Len: 369 Check: 7018 Weight: 1.00 // 1 50 ENSP00000399718/1-344 MAAATELNRP SSGDRNLERR CRPNLSREVL YEIFRSLHTL VGQLDLRDDV ENSBTAP00000013114/1-344 MAAAAELSRP TIGDRGLERS CSPSLSREIV CEVFRSLHNL AGQLNLRDDV bmy_03848T0/1-323 MATAAELSRP TIGDRSLERS CSPNLSQEVV CEVFRSLHTL AGQLNIRDDV BACU008724/1-358 MATAAELSRP TIGDRSLERS CSPNLSQEVV CEVFRSLHTL AGQLNIRDDV ENSTTRP00000002736/1-344 MATAAELSRP TIGDRSLERS CSPNLSQEVV CEVFRSLHTL AGQLNIRDDV 51 100 ENSP00000399718/1-344 VKITIDWNKL QSLSA----- ---------F QPALLFSALE QHILYL---- ENSBTAP00000013114/1-344 VKITIDWNKL QSLSA----- ---------L QPAFLFSALE QHVLYL---- bmy_03848T0/1-323 VKITIDWNKL QSLSA----- ---------F QPALLFSALE QHVLYLQFEP BACU008724/1-358 VKITIDWNKL QSLSAXXXXX XXXXXXXXXX QPALLFSALE QHVLYL---- ENSTTRP00000002736/1-344 VKITIDWNKL QSLSA----- ---------F QPALLFSALE QHVLYL---- 101 150 ENSP00000399718/1-344 -------QPF LAKLQSPIKE ENTTAVEEIG RTEMGNKNEV NDKFSIGDLQ ENSBTAP00000013114/1-344 -------QPF LAKLQPLIKE ENTTVAEEIG KTETGNKNEV NANFPIGDLE bmy_03848T0/1-323 QQMELCSQPF LAKLQPLIKE ENTTVVEEIG KTETGNKNEV NAKFPIGDLQ BACU008724/1-358 -------QPF LAKLQPLIKE ENTTVVEERG KTETGNKNEV NARFPIGDLQ ENSTTRP00000002736/1-344 -------QPF LAKLQPLIKE ENTTVVEEIG KTETGNKNEV NAKFPIGDLQ 151 200 ENSP00000399718/1-344 EEEKHKESDL RDVKKTQIHF DPEVVQIKAG KAEIDRRISA FIERKQAEIN ENSBTAP00000013114/1-344 EEEKHKDSDL GDVKKTQVHF DPEVVQIKAG KAEIDRRISA FIERKQAEIN bmy_03848T0/1-323 EEEKHKDCDL GDVKKTQIHF DPEVVQIKAG KAEIDRRISA FIERKQAEIN BACU008724/1-358 EEEKHKDCDL GDVKKTQIHF DPEVVQIKAG KAEIDRRISA FIERKQAEIN ENSTTRP00000002736/1-344 EEEKHKDCDL GDVKKTQIHF DPEVVQIKAG KAEIDRRISA FIERKQAEIN 201 250 ENSP00000399718/1-344 ENNVREFCNV IDCNQENSCA RTDAIFTPYP GFKSHVKVSR VVNTYGPQTR ENSBTAP00000013114/1-344 ENNVREFCNV IDCNQENSCA RTDAIFTPYP GFKSHVKVSR VVNTYGPQTR bmy_03848T0/1-323 ENNVREFCNV IDCNQENSCA RTDAVFTPYP GFKSHVKVSR VVNTYGPQTR BACU008724/1-358 ENNVREFCNV IDCNQENSCA RTDAVFTPYP GFKSHVKVSR VVNTYGPQTR ENSTTRP00000002736/1-344 ENNVREFCNV IDCNQENSCA RTDAVFTPYP GFKSHVKVSR VVNTYGPQTR 251 300 ENSP00000399718/1-344 PEGIPGSGHK PNSMLRDCGN QAVEERLQNI EAHLRLQTGG PVPRDIYQRI ENSBTAP00000013114/1-344 SEGIPGSGHN PNSMLRDCGN QAVEERLQNI EAHLRLQTGG PVPRDIYQRI bmy_03848T0/1-323 PEGIQGSGHK PNSMLRDCGN QAVEERLQNI EAHLRLQTGG PVPRDIYQRI BACU008724/1-358 PEGIQGSGHK PNSMLRDCGN QAVEERLQNI EAHLRLQTGG PVPRDIYQRI ENSTTRP00000002736/1-344 PEGIQGSGHK PNSMLRDCGN QAVEERLQNI EAHLRLQTGG PVPRDIYQRI 301 350 ENSP00000399718/1-344 KKLEDKILEL EGISPEYFQS VSFSGKRRKV QPPQQNYSLA ELDEKISALK ENSBTAP00000013114/1-344 KKLEDKILEL EGISPEYFQS VNFSGKRRKV QPPQQNYSLA ELDEKISALK bmy_03848T0/1-323 KKLEDRILEL EGISPEYFQS VNFSGKRRKV QPPQG----- ---------- BACU008724/1-358 KKLEDRILEL EGISPEYFQS VNFSGKRRKV QPPQQNYSLA ELDEKISALK ENSTTRP00000002736/1-344 KKLEDRILEL EGISPEYFQS VHFSGKRRKV QPPQQNYSLA ELDEKISALK 351 400 ENSP00000399718/1-344 QALLRKSREA ESMATHHLP ENSBTAP00000013114/1-344 QALLRKSRET ESMATRHLP bmy_03848T0/1-323 ---------- -------VE BACU008724/1-358 QALLRKSREA ESMVTHHLP ENSTTRP00000002736/1-344 QALLRKSREA ESMVTHHLP