KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:48:46 2014 Check: 00 .. Name: ENSP00000330918/1-321 Len: 366 Check: 8171 Weight: 1.00 Name: ENSBTAP00000013127/1-321 Len: 366 Check: 8552 Weight: 1.00 Name: BACU009204/1-220 Len: 366 Check: 4100 Weight: 1.00 Name: ENSTTRP00000007767/1-321 Len: 366 Check: 999 Weight: 1.00 Name: bmy_02716T0/1-366 Len: 366 Check: 5706 Weight: 1.00 // 1 50 ENSP00000330918/1-321 ---------- ---------- ---------- ---------- -----MAAAE ENSBTAP00000013127/1-321 ---------- ---------- ---------- ---------- -----MAEAE BACU009204/1-220 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007767/1-321 ---------- ---------- ---------- ---------- -----MAEVE bmy_02716T0/1-366 MGGKCEARXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 51 100 ENSP00000330918/1-321 AGGDDARCVR LSAERAQALL ADVDTLLFDC DGVLWRGETA VPGAPEALRA ENSBTAP00000013127/1-321 AGGDDGRCVR LNAERAQALL ADVDTLLFDC DGVLWRGETA VPGAPETLTA BACU009204/1-220 ------MSSR L--------- ---------- --------TS CADSP----- ENSTTRP00000007767/1-321 AGGDEGRCVR LNAKRAQELL ADVDTVLFDC DGVLWRGETA VSGAPETLTA bmy_02716T0/1-366 XXXXXGRCVR LNAERAQELL ADVDTVLFDC DGVLWRGETA VAGAPETLTA 101 150 ENSP00000330918/1-321 LRARGKRLGF ITNNSSKTRA AYAEKLRRLG FGGPAGPGAS LEVFGTAYCT ENSBTAP00000013127/1-321 LRARGKRLAF ITNNSSKTRE AYAEKLRCLG FGAPAGPDAG REVFGTAYCT BACU009204/1-220 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007767/1-321 LRARGKRLGF ITNNSSKTRE AYAEKLRRLG FGGPTGPGAG SEVFGTAYCT bmy_02716T0/1-366 LRARGKRLGF ITNNSSKTRE AYAEKLRRLG FGGPTWPGAG SEVFGTAYCT 151 200 ENSP00000330918/1-321 ALYLRQRLAG APAPKAYVLG SPALAAELEA VGVASVGVGP EPLQGEGPGD ENSBTAP00000013127/1-321 ALYLRQRLTG PPAPKAYVLG SVALAAELEA VGVSCVGVGP EPLLGDGPGA BACU009204/1-220 --------AP PPNFRSERPT HVALAAELEA VGVSCVGVGP EPLQGDGPSA ENSTTRP00000007767/1-321 ALYLRQRLTG LPTPKAYVLG SVALATELEA VGVSCVGVGP EPLQGDGPSA bmy_02716T0/1-366 ALYLRQRLTG PPAPKAYVLG SVALAAELEA VGVSCVGVGP EPLQGDGPSA 201 250 ENSP00000330918/1-321 WLHAPLEPDV RAVVVGFDPH FSYMKLTKAL RYLQQPGCLL VGTNMDNRLP ENSBTAP00000013127/1-321 WLDAPLEPDV RAVVVGFDPH FSYMKLTKAV RYLQQPDCLL VGTNMDNRLP BACU009204/1-220 WLDEPLEPDV RAVVVGFDPH FSYMKLTKAV RYLQQPGCLL VGTNMDNRLP ENSTTRP00000007767/1-321 WLDEPLEPDV RAVVVGFDPH FSYMKLTKAV RYLQQPGCLL VGTNMDNRLP bmy_02716T0/1-366 WLDEPLEPDV RAVVVGFDPH FSYMKLTKAV RYLQQPGCLL VGTNMDNRLP 251 300 ENSP00000330918/1-321 LENGRFIAGT GCLVRAVEMA AQRQADIIGK PSRFIFDCVS QEYGINPERT ENSBTAP00000013127/1-321 LENGRFIAGT GCLVRAVEMA AQRQADIIGK PSRFIFDCVS QEYGIHPERT BACU009204/1-220 LENGRFIAGT GCLVRAVEMA AQRQADIIGK PSRFIFDCVS QEYGINPERT ENSTTRP00000007767/1-321 LENGRFIAGT GCLVRAVEMA AQRQADVIEK PSRFIFDCVS QEYGINAERT bmy_02716T0/1-366 LENGRFIAGT GCLVRAVEMA AQRQADIIGK PSRFIFDCVS QEYGINPERT 301 350 ENSP00000330918/1-321 VMVGDRLDTD ILLGATCGLK TILTLTGVST LGDVKNNQES DCVSKKKMVP ENSBTAP00000013127/1-321 VMVGDRLDTD ILLGVTCGLK TILTLTGVSS LRDVKSNQES DCMAKKKMVP BACU009204/1-220 IMVGDRLDTD ILLGVTCGLK TILTLTGVST LRDVKSNQES DCLSKKKMVP ENSTTRP00000007767/1-321 IMVGDRLDTD ILLGVTCGLK TILTLTEIST LRDVKSNQES DCLSKKKMVP bmy_02716T0/1-366 IMVGDRLDTD ILLGVTCGLK TILTLTGVST LRDVKSNQES DCLSKKKMVP 351 400 ENSP00000330918/1-321 DFYVDSIADL LPALQG ENSBTAP00000013127/1-321 DFYVDSIADL LPALQG BACU009204/1-220 DFYVDSIADL LPALQG ENSTTRP00000007767/1-321 DFYVDSIADL LPALQG bmy_02716T0/1-366 DFYVDSIADL LPALQG