KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:14 2014 Check: 00 .. Name: ENSBTAP00000013140/1-1038 Len: 1039 Check: 7459 Weight: 1.00 Name: ENSP00000215862/1-970 Len: 1039 Check: 2739 Weight: 1.00 Name: BACU003322/1-977 Len: 1039 Check: 3244 Weight: 1.00 Name: bmy_01593T0/1-1033 Len: 1039 Check: 3078 Weight: 1.00 Name: ENSTTRP00000009712/1-1033 Len: 1039 Check: 3787 Weight: 1.00 // 1 50 ENSBTAP00000013140/1-1038 MAFSNYSSLN RAQLTFEYLH TNSTTHEFLF GALAELVDNA RDADATRIDI ENSP00000215862/1-970 ---------- ---------- ---------- ---------- ---------- BACU003322/1-977 -----MTTLG GKDMPI---- ---------- ---------- ---------- bmy_01593T0/1-1033 MAFTNYSSLN RAQLTFDYLH TNSTTHEFLF GALAELVDNA RDADATRIDI ENSTTRP00000009712/1-1033 MAFTNYSSLN RAQLTFDYLH TNSTTHEFLF GALAELVDNA RDADATRIDI 51 100 ENSBTAP00000013140/1-1038 YAERREDLRG GFMLCFLDDG AGMDPSDAAS VIQFGKSAKR TPESTQIGQY ENSP00000215862/1-970 ---------- --MLCFLDDG AGMDPSDAAS VIQFGKSAKR TPESTQIGQY BACU003322/1-977 ---------- --FLYFSE-- --FAHSDAAS VIQFGKSAKR TPESTQIGQY bmy_01593T0/1-1033 YAERREDLRG GFMLCFLDDG AGMDPSDAAS VIQFGKSAKR TPESTQIGQY ENSTTRP00000009712/1-1033 YAERREDLRG GFMLCFLDDG AGMDPSDAAS VIQFGKSAKR TPESTQIGQY 101 150 ENSBTAP00000013140/1-1038 GNGLKSGSMR IGKDFILFTK KEDTMTCLFL SRTFHEEEGI DEVIVPLPTW ENSP00000215862/1-970 GNGLKSGSMR IGKDFILFTK KEDTMTCLFL SRTFHEEEGI DEVIVPLPTW BACU003322/1-977 GNGLKSGSMR IGKDFILFTK KEETMTCLFL SRTFHEEEGI DEVIVPLPTW bmy_01593T0/1-1033 GNGLKSGSMR IGKDFILFTK KEETMTCLFL SRTFHEEEGI DEVIVPLPTW ENSTTRP00000009712/1-1033 GNGLKSGSMR IGKDFILFTK KEETMTCLFL SRTFHEEEGI DEVIVPLPTW 151 200 ENSBTAP00000013140/1-1038 NARTREPVTD NVEKFAIETE LIYKYSPFRN EEEVMTQFMK ILGDSGTLVI ENSP00000215862/1-970 NARTREPVTD NVEKFAIETE LIYKYSPFRT EEEVMTQFMK IPGDSGTLVI BACU003322/1-977 NARTREPVTD NVEKFAIETE LIYKYSPFRN EEEVMTQFMK IPGDSGTLVI bmy_01593T0/1-1033 NARTREPVTD NVEKFAIETE LIYKYSPFRN EEEVMTQFMK IPGDSGTLVI ENSTTRP00000009712/1-1033 NARTREPVTD NVEKFAIETE LIYKYSPFRN EEEVMTQFMK IPGDSGTLVI 201 250 ENSBTAP00000013140/1-1038 IFNLKLMDNG EPELDIVSNP RDIQMAETSL EGTKPERRSF RAYAAVLYID ENSP00000215862/1-970 IFNLKLMDNG EPELDIISNP RDIQMAETSP EGTKPERRSF RAYAAVLYID BACU003322/1-977 IFNLKLMDNG EPELDIISNP RDIQMAETSP EGTKPERRSF RAYAAVLYID bmy_01593T0/1-1033 IFNLKLMDNG EPELDIISNP RDIQMAETSP EGTKPERRSF RAYAAVLYID ENSTTRP00000009712/1-1033 IFNLKLMDNG EPELDIISNP RDIQMAETSP EGTKPERRSF RAYAAVLYID 251 300 ENSBTAP00000013140/1-1038 PRMRIFIHGH KVQTKRLSCC LYKPRMYKYT SSRFKTRAEQ EVKKAEHVAR ENSP00000215862/1-970 PRMRIFIHGH KVQTKRLSCC LYKPRMYKYT SSRFKTRAEQ EVKKAEHVAR BACU003322/1-977 PRMRIFIHGH KVQTKRLSCC LYKPRMYKYT SSRFKTRAEQ EVKKAEHVAR bmy_01593T0/1-1033 PRMRIFIHGH KVQTKRLSCC LYKPRMYKYT SSRFKTRAEQ EVKKAEHVAR ENSTTRP00000009712/1-1033 PRMRIFIHGH KVQTKRLSCC LYKPRMYKYT SSRFKTRAEQ EVKKAEHVAR 301 350 ENSBTAP00000013140/1-1038 IAEEKAREAE SKARTLEVRL GGDLTRDSRV MLRQVQNTAI TLRREADVKK ENSP00000215862/1-970 IAEEKAREAE SKARTLEVRL GGDLTRDSRV MLRQVQNRAI TLRREADVKK BACU003322/1-977 IAEEKAREAE SKARTLEVRL GGDLTRDSRV MLRQVQNMAI TLRREADVKK bmy_01593T0/1-1033 IAEEKAREAE SKARTLEVRL GGDLTRDSRV MLRQVQNMAI TLRREADVKK ENSTTRP00000009712/1-1033 IAEEKAREAE SKARTLEVRL GGDLTRDSRV MLRQVQNTAI TLRREADVKK 351 400 ENSBTAP00000013140/1-1038 RIKEAKQRAL KEPKELNFVF GVNIEHRDLD GMFIYNCSRL IKMYEKVGPQ ENSP00000215862/1-970 RIKEAKQRAL KEPKELNFVF GVNIEHRDLD GMFIYNCSRL IKMYEKVGPQ BACU003322/1-977 RIKEAKQRAL KEPKELNFVF GVNIEHRDLD GMFIYNCSRL IKMYEKVGPQ bmy_01593T0/1-1033 RIKEAKQRAL KEPKELNFVF GVNIEHRDLD GMFIYNCSRL IKMYEKVGPQ ENSTTRP00000009712/1-1033 RIKEAKQRAL KEPKELNFVF GVNIEHRDLD GMFIYNCSRL IKMYEKVGPQ 401 450 ENSBTAP00000013140/1-1038 LEGGMACGGV VGVVDVPYLV LEPTHNKQDF ADAKEYRHLL RAMGEHLAQY ENSP00000215862/1-970 LEGGMACGGV VGVVDVPYLV LEPTHNKQDF ADAKEYRHLL RAMGEHLAQY BACU003322/1-977 LEGGMACGGV VGVVDVPYLV LEPTHNKQDF ADAKEYRHLL RAMGEHLAQY bmy_01593T0/1-1033 LEGGMACGGV VGVVDVPYLV LEPTHNKQDF ADAKEYRHLL RAMGEHLAQY ENSTTRP00000009712/1-1033 LEGGMACGGV VGVVDVPYLV LEPTHNKQDF ADAKEYRHLL RAMGEHLAQY 451 500 ENSBTAP00000013140/1-1038 WKDIAIAQRG IIKFWDEFGY LSANWNQPPS SDLRYKRRRS MEIPTTIQCD ENSP00000215862/1-970 WKDIAIAQRG IIKFWDEFGY LSANWNQPPS SELRYKRRRA MEIPTTIQCD BACU003322/1-977 WKDIAIAQRG IIKFWDEFGY LSANWNQPPS SELRYKRRRA MEIPTTIQCD bmy_01593T0/1-1033 WKDIAIAQRG IIKFWDEFGY LSANWNQPPS SELRYKRRRA MEIPTTIQCD ENSTTRP00000009712/1-1033 WKDIAIAQRG IIKFWDEFGY LSANWNQPPS SELRYKRRRA MEIPTTIQCD 501 550 ENSBTAP00000013140/1-1038 LCLKWRTLPF QLNSVERDYP DTWVCSMNPD PEQDRCEASE QKQKFPLGTL ENSP00000215862/1-970 LCLKWRTLPF QLSSVEKDYP DTWVCSMNPD PEQDRCEASE QKQKVPLGTF BACU003322/1-977 LCLKWRTLPF QLSSVEKDYP DTWVCSMNPD PEQDRCEASE QKQKVPLGTF bmy_01593T0/1-1033 LCLKWRTLPF QLSSVEKDYP DTWVCSMNPD PEQDRCEASE QKQKVPLGTF ENSTTRP00000009712/1-1033 LCLKWRTLPF QLSSVEKDYP DTWVCSMNPD PEQDRCEASE QKQKVPLGTF 551 600 ENSBTAP00000013140/1-1038 KKDLKTQEEK QKQLTEKIRQ QQEKLEALQK TTPIRSQADL KKLPLEVTTR ENSP00000215862/1-970 RKDMKTQEEK QKQLTEKIRQ QQEKLEALQK TTPIRSQADL KKLPLEVTTR BACU003322/1-977 RKDLKTQEEK QKQLTEKIRQ QQEKLEALQK TTPIRSQADL KKLPLEVTTR bmy_01593T0/1-1033 RKDLKTQEEK QKQLTEKIRQ QQEKLEALQK TTPIRSQADL KKLPLEVTTR ENSTTRP00000009712/1-1033 RKDLKTQEEK QKQLTEKIRQ QQEKLEALQK TTPIRSQADL KKLPLEVTTR 601 650 ENSBTAP00000013140/1-1038 PSSEEPARRP QRPRSPPLPA VIKNAPSRPP SLQAPRPANQ PRKAPVISSA ENSP00000215862/1-970 PSTEEPVRRP QRPRSPPLPA VIRNAPSRPP SLPTPRPASQ PRKAPVISST BACU003322/1-977 PSTEEPARRP QRPRSPPLPA VIKNAPSRPP SLQAPRPASQ PRKAPVIGSV bmy_01593T0/1-1033 PSTEEPARRP QRPRSPPLPA VIKNAPSRPP SLQAPRPASQ PRKAPVIGSV ENSTTRP00000009712/1-1033 PSTEEPARRP QRPRSPPLPA VIRNAPSRPP SLQAPRPASQ PRKAPIISSV 651 700 ENSBTAP00000013140/1-1038 PKPAAPAARE EASTSRLLQP PEAPRKPANT LVRPASRPTP PVQPPLPSPQ ENSP00000215862/1-970 PKLPALAARE EASTSRLLQP PEAPRKPANT LVKTASRPAP LVQQLSPSLL BACU003322/1-977 PKPPALTARE EASTSRLLQP PEVPRKPANT PVKTASRPAP PVQPPSPSLL bmy_01593T0/1-1033 PKPPAPTARE EASTSRLLQP PEVPRKPANT PVKTASRPAP PVQPPSPSLL ENSTTRP00000009712/1-1033 PKPPASTARE EASTSRLLQP PEVPRKPANT PVKTASRPAP PVQPPSPSLL 701 750 ENSBTAP00000013140/1-1038 PNSRSPREVP SSRALKTPVV KKPELPTKLS PATPSRKRSL GVSDEEEAEE ENSP00000215862/1-970 PNSKSPREVP SPKVIKTPVV KKTESPIKLS PATPSRKRSV AVSDEEEVEE BACU003322/1-977 PNSKSPREVP APRAIKTPVV KKPEPPSKLS LAVPGRKRSL GVSDEEEAEE bmy_01593T0/1-1033 PNSKNPREVP APRAIKTPVV KKPEPPSKLS LAVPGRKRSL GVSDEEEAEE ENSTTRP00000009712/1-1033 PNSKSPREVP APRAIKTPVV KKPEPPSKLS LATPGRKRSL GVSDEEEAEE 751 800 ENSBTAP00000013140/1-1038 EAEKRKERSK RGKLVVKEEK KDLNELSDSS GEEDSADLKR AQKDKGLHVE ENSP00000215862/1-970 EAERRKERCK RGRFVVKEEK KDSNELSDSA GEEDSADLKR AQKDKGLHVE BACU003322/1-977 EAERRKERSK RGKFAVKEEK KDLNELSDSA GEEDPADLKS AQKDKGLHVE bmy_01593T0/1-1033 EAERRKERSK RGKFAVKEEK KDLNELSDSA GEEDPADLKS AQKDKGLHVE ENSTTRP00000009712/1-1033 EAERRKERSK RGKFAVKEEK KDLNELSDSA GEEDPADLKS AQKDKGLHVE 801 850 ENSBTAP00000013140/1-1038 VRVNREWYTG RVTAVEVGKN AMRWKVKFDY VPTDTTPRDR WVEKGSDDVR ENSP00000215862/1-970 VRVNREWYTG RVTAVEVGKH VVRWKVKFDY VPTDTTPRDR WVEKGSEDVR BACU003322/1-977 VRVNREWYTG RVTAVELGKN VVRWKVKFDY VPTDTTPRDR WVEKGSEDVR bmy_01593T0/1-1033 VRVNREWYTG RVTAVELGKN VVRWKVKFDY VPTDTTPRDR WVEKGSEDVR ENSTTRP00000009712/1-1033 VRVNREWYTG RVTAVELGKN VVRWKVKFDY VPTDTTPRDR WVEKGSEDVR 851 900 ENSBTAP00000013140/1-1038 LMKPPSPEYE SPDTRQ-GRE EVAVAAAPAG DLVAQQAIAT VEPSTSDCIP ENSP00000215862/1-970 LMKPPSPEHQ SLDTQQEGG- EEEVGP---- --VAQQAIAV AEPSTSECLR BACU003322/1-977 LMKPPSPEYQ SPDTQQEGG- EEEEAA---- --VAQQAVAM AEPSTSDCVR bmy_01593T0/1-1033 LMKPPSPEYQ SPDTQQEGGE EEEEAA---- --VAQQAVAM AEPSTSDCIR ENSTTRP00000009712/1-1033 LMKPLSLEYQ SPDTQQEGGE EEEEAA---- --VAQQAVAM AEPSPSDCIR 901 950 ENSBTAP00000013140/1-1038 IEPDTTAPST NHETIDLLVQ ILRNCLRYFL PPSFPISKKE LSAMNSDELI ENSP00000215862/1-970 IEPDTTALST NHETIDLLVQ ILRNCLRYFL PPSFPISKKQ LSAMNSDELI BACU003322/1-977 IEPDTTAPST NHETIDLLVQ ILRNCLRYFL PPSFPISKKE LSAMNSDELI bmy_01593T0/1-1033 IEPDTTAPNT NHETIDLLVQ ILRNCLRYFL PPSFPISKKE LSAMNSDELI ENSTTRP00000009712/1-1033 IEPDTTAPST NHETIDLLVQ ILRNCLRYFL PPSFPISKKE LSAMNSDELI 951 1000 ENSBTAP00000013140/1-1038 SFPLKEYFKQ YEVGLQNLCH SYQSRADSRA KASEESLRTS ERKLRETEEK ENSP00000215862/1-970 SFPLKEYFKQ YEVGLQNLCN SYQSRADSRA KASEESLRTS ERKLRETEEK BACU003322/1-977 SFPLKEYFKQ YEVGLQNLCH SYQSRADSRA KASEESLRTS ERKLRETEEK bmy_01593T0/1-1033 SFPLKEYFKQ YEVGLQNLCH SYQSRADSRA KASEESLRTS ERKLRETEEK ENSTTRP00000009712/1-1033 SFPLKEYFKQ YEVGLQNLCH SYQSRADSRA KASEESLRTS ERKLRETEEK 1001 1050 ENSBTAP00000013140/1-1038 LQKLRTNIVA LLQKVQEDLD INTDDELDAY IEDLITKGD ENSP00000215862/1-970 LQKLRTNIVA LLQKVQEDID INTDDELDAY IEDLITKGD BACU003322/1-977 LQKLRTNIVA LLQKVQEDID INTDDELDAY IEDLITKGD bmy_01593T0/1-1033 LQKLRTNIVA LLQKVQEDID INTDDELDAY IEDLITKGD ENSTTRP00000009712/1-1033 LQKLRTNIVA LLQKVQEDID INTDDELDAY IEDLITKGD