KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:49:15 2014 Check: 00 .. Name: BACU010289/1-710 Len: 748 Check: 9873 Weight: 1.00 Name: bmy_19609T0/1-602 Len: 748 Check: 6241 Weight: 1.00 Name: ENSP00000253122/1-635 Len: 748 Check: 7663 Weight: 1.00 Name: ENSBTAP00000013141/1-567 Len: 748 Check: 604 Weight: 1.00 // 1 50 BACU010289/1-710 ---------- ---------- --MGPGR--- ------SLQL GRRPPHRASE bmy_19609T0/1-602 ---------- ---------- -MMGPGR--- ------SLQL GLHPPRRASE ENSP00000253122/1-635 MAKKSAENGI YSVSGDEKKG PLIAPGPDGA PAKGDGPVGL GTPGGRLAVP ENSBTAP00000013141/1-567 ---------- ---------- ---------- ---------- ---------- 51 100 BACU010289/1-710 SQADWPGPAE ESGSSPHLAK GPPCASGHLE L---HPPGVF LIPYILIALV bmy_19609T0/1-602 SQADWPGPAE EFGSSPHLAK GPPCASGHLE L---HPPGVF LIPYILIALV ENSP00000253122/1-635 PRETWTRQMD FIMSCVGFAV GLGNVWRFPY LCYKNGGGVF LIPYVLIALV ENSBTAP00000013141/1-567 ---------- --------AV GLGNVWRFPY LCYKNGGGVF LIPYILIALI 101 150 BACU010289/1-710 GGIPIFFLEI WLGQFMKAGS INVWNICPLF KGLGYASMVI GTISTSDSTA bmy_19609T0/1-602 GGIPIFFLEI SLGQFMKAGS INVWNICPLF KGLGYASMVI VFYCNTYYI- ENSP00000253122/1-635 GGIPIFFLEI SLGQFMKAGS INVWNICPLF KGLGYASMVI VFYCNTYYI- ENSBTAP00000013141/1-567 GGIPIFFLEI SLGQFMKAGS INVWNICPLF KGLGYASMVI VFYCNTYYI- 151 200 BACU010289/1-710 GECSSGWEPM GLL----TLP PWIGQWHRWT ILGSRTAQAD LITRPSTDVT bmy_19609T0/1-602 --MVLAWGFY YLVKSFTTTL PWATCGHTWN -----TPDCV EIFR------ ENSP00000253122/1-635 --MVLAWGFY YLVKSFTTTL PWATCGHTWN -----TPDCV EIFR------ ENSBTAP00000013141/1-567 --MVLAWGFY YLVKSFTTTL PWATCGHTWN -----TPDCV EIFR------ 201 250 BACU010289/1-710 HTFCGQVDSP TKTEPRRAVS PGPTIQGTHG NKVLRLSGGL EVPGALNWEV bmy_19609T0/1-602 HEDCANATLA NLTCDQLADR RSPVIE-FWE NKVLRLSGGL EVPGALNWEV ENSP00000253122/1-635 HEDCANASLA NLTCDQLADR RSPVIE-FWE NKVLRLSGGL EVPGALNWEV ENSBTAP00000013141/1-567 HEDCANATMA NLTCDQLADR RSPVIE-FWE NKVLRLSEGL EVPGALNWEV 251 300 BACU010289/1-710 TLCLLACWVL VYFCVWKGVK STGKVVYFTA TFPYVVLVVL LVRGVLLPGA bmy_19609T0/1-602 TLCLLACWVL VYFCVGKGVK STGKVVYFTA TFPYVVLVVL LVRGVLLPGA ENSP00000253122/1-635 TLCLLACWVL VYFCVWKGVK STGKIVYFTA TFPYVVLVVL LVRGVLLPGA ENSBTAP00000013141/1-567 TLCLLTCWVL VYFCVWKGVK STGKIVYFTA TFPYVVLVVL LVRGVLLPGA 301 350 BACU010289/1-710 LDGIIYYLKP DWSKLASPQV WIDAGTQIFF SYAIGLGALT ALGSYNRFNN bmy_19609T0/1-602 VDGIIYYLKP DWSKLASPQV WIDAGTQIFF SYAIGLGALT ALGSYNRFNN ENSP00000253122/1-635 LDGIIYYLKP DWSKLGSPQV WIDAGTQIFF SYAIGLGALT ALGSYNRFNN ENSBTAP00000013141/1-567 LDGIIYYLKP DWSKLASPQV WIDAGTQIFF SYAIGLGALT ALGSYNRFNN 351 400 BACU010289/1-710 NCYKDAIILA LINSGTSFFA GFVVFSILGF MATEQGVHIS KVAESGPGLA bmy_19609T0/1-602 NCYKDAIILA LINSGTSFFA GFVVFSILGF MATEQGVHIS KVAESGPGLA ENSP00000253122/1-635 NCYKDAIILA LINSGTSFFA GFVVFSILGF MAAEQGVHIS KVAESGPGLA ENSBTAP00000013141/1-567 NCYKDAIILA LINSGTSFFA GFVVFSILGF MATEQGVHIS KVAESGPGLA 401 450 BACU010289/1-710 FIAYPRAVTL MPVAPLWAAL FFFMLLLLGL DSQFVGVEGF ITGLLDLLPA bmy_19609T0/1-602 FIAYPRAVTL MPVAPLWAAL FFFMLLLLGL DSQFVGVEGF ITGLLDLLPA ENSP00000253122/1-635 FIAYPRAVTL MPVAPLWAAL FFFMLLLLGL DSQFVGVEGF ITGLLDLLPA ENSBTAP00000013141/1-567 FIAYPRAVTL MPVAPLWAAL FFFMLLLLGL DSQFVGVEGF ITGLLDLLPA 451 500 BACU010289/1-710 SYYFCFQREI SVALCCALCF VIDLSMVTDV SGGRGGMYVF QLFDYYSASG bmy_19609T0/1-602 SYYFRFQREI SVALCCALCF VIDLSMVTD- ----GGMYVF QLFDYYSASG ENSP00000253122/1-635 SYYFRFQREI SVALCCALCF VIDLSMVTD- ----GGMYVF QLFDYYSASG ENSBTAP00000013141/1-567 SYYFRFQREI SVALCCTICF VIDLSMVTD- ----GGMYVF QLFDYYSASG 501 550 BACU010289/1-710 TTLLWQAFWE CVVIAWVYGA DRFMDDVACM IGYRPCPWMK WCWSFFTPLV bmy_19609T0/1-602 TTLLWQAFWE CVVIAWVYGA DRFMDDVACM IGYRPCPWMK WCWSFFTPLV ENSP00000253122/1-635 TTLLWQAFWE CVVVAWVYGA DRFMDDIACM IGYRPCPWMK WCWSFFTPLV ENSBTAP00000013141/1-567 TTLLWQAFWE CVVVAWVYGA DRFMDDVACM IGYRPCPWMK WCWSFFTPLV 551 600 BACU010289/1-710 CMGIFIFNTV YYKPLVYNNT YVYPWWGEAV GWGFALSSML CVPLHLLGCL bmy_19609T0/1-602 CMGIFIFNTV YYKPLVYNNT YVYPWWGEAV GWGFALSSML CVPLHLLGCL ENSP00000253122/1-635 CMGIFIFNVV YYEPLVYNNT YVYPWWGEAM GWAFALSSML CVPLHLLGCL ENSBTAP00000013141/1-567 CMGIFIFNVV YHEPLVYNNT YVYPWWGEAV GWAFALSSML CVPLHLLGCL 601 650 BACU010289/1-710 LKAKGTVAER WQHLTQPVWG LHHLEYRAQD SDVRGLTTLT PVSESSKAKQ bmy_19609T0/1-602 LKAKGTVAER WQHLTQPVWG LHHLEYRAQD SDVRGLTTLT PMSESS---- ENSP00000253122/1-635 LRAKGTMAER WQHLTQPIWG LHHLEYRAQD ADVRGLTTLT PVSESS---- ENSBTAP00000013141/1-567 LRAKGTMAER WQHLTQPIWG LHHLEYRAQD SDVRGLTTLT PVSESS---- 651 700 BACU010289/1-710 KLQAVECVSL SCGYYRDIGK MASISDQDMD AYLVEQSRLH ASDFNVLSAL bmy_19609T0/1-602 KVVVVESVM- ---------- ---------- ---------- ---------- ENSP00000253122/1-635 KVVVVESVM- ---------- ---------- ---------- ---------- ENSBTAP00000013141/1-567 KVVVVESVM- ---------- ---------- ---------- ---------- 701 750 BACU010289/1-710 SELYFYVAKY RQEVLPVSPP CTEAVGPPLG AGPSFSTFHS AQTQAAKH bmy_19609T0/1-602 ---------- ---------- ---------- ---------- -------- ENSP00000253122/1-635 ---------- ---------- ---------- ---------- -------- ENSBTAP00000013141/1-567 ---------- ---------- ---------- ---------- --------